BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007439
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   191   9e-47
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   189   2e-46
sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polyp...   184   1e-44
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]...   184   1e-44
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu...   183   2e-44

>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  191 bits (485), Expect = 9e-47
 Identities = 95/125 (76%), Positives = 101/125 (80%)
 Frame = -1

Query: 529 KPSPFLEKSPAAVRGLPSLARSTASFRVEASGVKKIKTDTPYGTGGGMKLRDGLDASGRK 350
           K SPFLEKS  A RGLPSLAR ++SFRVEASGVKKIKTD PYGTGGGM LRDGLDASGRK
Sbjct: 12  KASPFLEKS--AARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSLRDGLDASGRK 69

Query: 349 PKGKGVYQFTDKYGANVDGYSPIYSPEEWAPSGDTYAGGTTGLLIWAVTXXXXXXXXXXL 170
           PKGKGVYQF DKYGANVDGYSPIY   +W+PSG  Y GGTTGLL+WA+T          L
Sbjct: 70  PKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITLAALLLGGALL 129

Query: 169 VYNTS 155
           VYNTS
Sbjct: 130 VYNTS 134


>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  189 bits (481), Expect = 2e-46
 Identities = 96/125 (76%), Positives = 101/125 (80%)
 Frame = -1

Query: 529 KPSPFLEKSPAAVRGLPSLARSTASFRVEASGVKKIKTDTPYGTGGGMKLRDGLDASGRK 350
           KPSPF  +   AVRGLPSLARS++SFRVEASG KKIKTD PYG GGGMKL DGLDASGRK
Sbjct: 12  KPSPFSVER-RAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKLSDGLDASGRK 70

Query: 349 PKGKGVYQFTDKYGANVDGYSPIYSPEEWAPSGDTYAGGTTGLLIWAVTXXXXXXXXXXL 170
            KGKGVYQF DKYGANVDGYSPIYSP+EW+P GD Y GGTTGLLIWAVT          L
Sbjct: 71  GKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTLAGLLLGGALL 130

Query: 169 VYNTS 155
           VYNTS
Sbjct: 131 VYNTS 135


>sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
           Flags: Precursor gi|170127|gb|AAA34037.1| 10kd
           polypeptide precursor [Spinacia oleracea]
          Length = 140

 Score =  184 bits (467), Expect = 1e-44
 Identities = 91/125 (72%), Positives = 100/125 (80%)
 Frame = -1

Query: 529 KPSPFLEKSPAAVRGLPSLARSTASFRVEASGVKKIKTDTPYGTGGGMKLRDGLDASGRK 350
           KPS F   + +AV+GLPSL+RS+ASF V ASGVKKIK D P G GGGMKLRDG+D+SGRK
Sbjct: 12  KPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGMKLRDGVDSSGRK 71

Query: 349 PKGKGVYQFTDKYGANVDGYSPIYSPEEWAPSGDTYAGGTTGLLIWAVTXXXXXXXXXXL 170
           P GKGVYQF DKYGANVDGYSPIY+ EEWAP+GD YAGGTTGLLIWAVT          L
Sbjct: 72  PTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLAGGALL 131

Query: 169 VYNTS 155
           VYNTS
Sbjct: 132 VYNTS 136


>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score =  184 bits (467), Expect = 1e-44
 Identities = 94/126 (74%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
 Frame = -1

Query: 529 KPSPF-LEKSPAAVRGLPSLARSTASFRVEASGVKKIKTDTPYGTGGGMKLRDGLDASGR 353
           KPSPF +EKS  +VRGLP+L+R   SF++EASGVKKIKTDTPYGTGGGM LRDGLDASGR
Sbjct: 12  KPSPFTVEKS--SVRGLPTLSRR--SFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGR 67

Query: 352 KPKGKGVYQFTDKYGANVDGYSPIYSPEEWAPSGDTYAGGTTGLLIWAVTXXXXXXXXXX 173
           KPKGKGVYQ+ DKYGANVDGYSPIY+ +EW+PSGD YAGG TGLLIWAVT          
Sbjct: 68  KPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLAGILAGGAL 127

Query: 172 LVYNTS 155
           LVY+TS
Sbjct: 128 LVYSTS 133


>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
           gi|118487848|gb|ABK95747.1| unknown [Populus
           trichocarpa] gi|222875313|gb|EEF12444.1| hypothetical
           protein POPTRDRAFT_674736 [Populus trichocarpa]
          Length = 137

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/126 (73%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
 Frame = -1

Query: 529 KPSPF-LEKSPAAVRGLPSLARSTASFRVEASGVKKIKTDTPYGTGGGMKLRDGLDASGR 353
           KPSPF +EKS  +VRGLP+L+R T  F++EASGVKKIKTDTPYGTGGGM LRDGLDASGR
Sbjct: 12  KPSPFTVEKS--SVRGLPTLSRRT--FKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGR 67

Query: 352 KPKGKGVYQFTDKYGANVDGYSPIYSPEEWAPSGDTYAGGTTGLLIWAVTXXXXXXXXXX 173
           KPKGKGVYQ+ DKYGANVDGYSPIY+ +EW+P+GD YAGG TGLLIWAVT          
Sbjct: 68  KPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGAL 127

Query: 172 LVYNTS 155
           LVY+TS
Sbjct: 128 LVYSTS 133