BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007389
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...   174   1e-41
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]   172   5e-41
ref|XP_002322279.1| chromatin remodeling complex subunit [Populu...   137   1e-30
ref|XP_002511138.1| DNA binding protein, putative [Ricinus commu...   125   9e-27
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr...   122   8e-26

>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
           gi|297734457|emb|CBI15704.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  174 bits (441), Expect = 1e-41
 Identities = 97/220 (44%), Positives = 136/220 (61%)
 Frame = -2

Query: 661 NTVNITEDQSASLEPQKPIKKEGLYHDQINEFKQPEDGENEEPPQKRRCMDSFADASDSL 482
           NT +I   Q+ SLE Q+ IK  G   +QINE +Q  D EN+ PP KR+C+ S +DA  SL
Sbjct: 309 NTSSIKPVQT-SLESQENIKNGGQGDEQINESEQNGDAENQGPPLKRKCITSLSDAGISL 367

Query: 481 MKQVAHLSTMVSPHVXXXXXXXXXXXXXXENPYARMFIEGEGDDIVNVFGSPTSSNEPKR 302
           M+QVA +STMV PH+              ENP  +   +G  D++    GSP  +N+ +R
Sbjct: 368 MRQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDNVTEELGSPIRNNKLER 427

Query: 301 LLDVENLEMAERHTQSDTQEGMTEKNSTSVTLRIRTXXXXXXXXXXXXXXXXADQEDREI 122
            L VE+ E+ ER   S+ Q+  +EKN+  + L++R                 ADQE REI
Sbjct: 428 SLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGAAAANAKSLADQEHREI 487

Query: 121 EHLVATVVDTQLRKLHCKVKHFEELQLIMEKEYTQIQELK 2
           EHLVAT+++TQ++KLHCK++HFE+L+LIMEKEYT ++ELK
Sbjct: 488 EHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELK 527


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score =  172 bits (436), Expect = 5e-41
 Identities = 97/220 (44%), Positives = 134/220 (60%)
 Frame = -2

Query: 661 NTVNITEDQSASLEPQKPIKKEGLYHDQINEFKQPEDGENEEPPQKRRCMDSFADASDSL 482
           NT +I   Q+ SLE Q+ IK  G   +QINE +Q  D EN+ PP KR+C+ S +DA  SL
Sbjct: 309 NTSSIKPVQT-SLESQENIKNGGQGDEQINESEQNGDAENQGPPLKRKCITSLSDAGISL 367

Query: 481 MKQVAHLSTMVSPHVXXXXXXXXXXXXXXENPYARMFIEGEGDDIVNVFGSPTSSNEPKR 302
           M QVA +STMV PH+              ENP  +   +G  D++    GSP  +N  +R
Sbjct: 368 MXQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDNVTEELGSPIRNNXLER 427

Query: 301 LLDVENLEMAERHTQSDTQEGMTEKNSTSVTLRIRTXXXXXXXXXXXXXXXXADQEDREI 122
            L VE+ E+ ER   S+ Q+  +EKN+  + L++R                 ADQE REI
Sbjct: 428 SLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGAAAANAKSLADQEHREI 487

Query: 121 EHLVATVVDTQLRKLHCKVKHFEELQLIMEKEYTQIQELK 2
           EHLVAT+++TQ++KLHCK++HFE+L+LIMEKEYT ++ELK
Sbjct: 488 EHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELK 527


>ref|XP_002322279.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222869275|gb|EEF06406.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 570

 Score =  137 bits (346), Expect = 1e-30
 Identities = 83/219 (37%), Positives = 122/219 (55%)
 Frame = -2

Query: 661 NTVNITEDQSASLEPQKPIKKEGLYHDQINEFKQPEDGENEEPPQKRRCMDSFADASDSL 482
           +T N  +  +A  E Q   K E   H+Q+N  ++  D  ++ P  KRR + S +DA  SL
Sbjct: 315 STNNSKQVPAAPSEHQDDTKHEDQLHEQMNANEEKGDVMDDGPLLKRRRITSVSDAGGSL 374

Query: 481 MKQVAHLSTMVSPHVXXXXXXXXXXXXXXENPYARMFIEGEGDDIVNVFGSPTSSNEPKR 302
           MKQVA +STMV P +              E    R   +GE D   N F SP+  ++ KR
Sbjct: 375 MKQVALISTMVGPDITAAAAEAAVAALCDETACPREIFDGEEDFPSNGFSSPSFHSKSKR 434

Query: 301 LLDVENLEMAERHTQSDTQEGMTEKNSTSVTLRIRTXXXXXXXXXXXXXXXXADQEDREI 122
           + +V+  E+ +  TQS  +E    +N   ++LR+R                 ADQEDRE+
Sbjct: 435 VDEVDASEVKQTPTQSVNEEASAWQNDIPLSLRLRAAVATTLGAAAAHAKLLADQEDREV 494

Query: 121 EHLVATVVDTQLRKLHCKVKHFEELQLIMEKEYTQIQEL 5
           E+L+AT+V+TQL+KLH K+KHF++L+LIMEKEY ++ EL
Sbjct: 495 ENLMATIVETQLKKLHHKIKHFDDLELIMEKEYAELDEL 533


>ref|XP_002511138.1| DNA binding protein, putative [Ricinus communis]
           gi|223550253|gb|EEF51740.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 547

 Score =  125 bits (313), Expect = 9e-27
 Identities = 76/199 (38%), Positives = 108/199 (54%)
 Frame = -2

Query: 598 EGLYHDQINEFKQPEDGENEEPPQKRRCMDSFADASDSLMKQVAHLSTMVSPHVXXXXXX 419
           EGL  +  N  +Q  D  +E  P KR+ + S +DA   LMKQVA +STM  P V      
Sbjct: 319 EGLLPESQNVSEQNGDAADEGSPLKRKRIVSLSDAGSCLMKQVALISTMAGPDVASAAAK 378

Query: 418 XXXXXXXXENPYARMFIEGEGDDIVNVFGSPTSSNEPKRLLDVENLEMAERHTQSDTQEG 239
                   E    R    G+ D       SPT  + P+R+L V++ E+ ER TQ +T++ 
Sbjct: 379 AAIGALCDETSCPREIFGGKEDFPAKGLWSPTLCSRPERVLYVKDTEIKERSTQLETEDT 438

Query: 238 MTEKNSTSVTLRIRTXXXXXXXXXXXXXXXXADQEDREIEHLVATVVDTQLRKLHCKVKH 59
              +N   +TLR+RT                AD+ED++IE LV TVV+ QL+KL  K+KH
Sbjct: 439 SLGQNDIPLTLRLRTAVATSLGAAAAHAKLLADEEDQKIEKLVTTVVEAQLKKLQYKIKH 498

Query: 58  FEELQLIMEKEYTQIQELK 2
           F+ L+LIMEKEY +++EL+
Sbjct: 499 FDNLELIMEKEYAELEELQ 517


>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
           gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
           SMARCC2 [Medicago truncatula]
          Length = 540

 Score =  122 bits (305), Expect = 8e-26
 Identities = 82/217 (37%), Positives = 112/217 (51%)
 Frame = -2

Query: 652 NITEDQSASLEPQKPIKKEGLYHDQINEFKQPEDGENEEPPQKRRCMDSFADASDSLMKQ 473
           N  + Q +S + Q+    +    +  NE +Q  D  NE P ++RR + + +D+S SLMKQ
Sbjct: 313 NRNQVQVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNENPSKRRR-VSTLSDSSSSLMKQ 371

Query: 472 VAHLSTMVSPHVXXXXXXXXXXXXXXENPYARMFIEGEGDDIVNVFGSPTSSNEPKRLLD 293
           V  LST+V PHV              EN   R   + E D            N   R L+
Sbjct: 372 VGLLSTVVDPHVTAAAASAAITALCDENSLPRDIFDVEED------------NASARALE 419

Query: 292 VENLEMAERHTQSDTQEGMTEKNSTSVTLRIRTXXXXXXXXXXXXXXXXADQEDREIEHL 113
            E LEM E  TQS+       K+   +TLRIR                 ADQEDREIEHL
Sbjct: 420 AEGLEMVEGSTQSEV------KDDIPLTLRIRAAIGTALGATAARAKLLADQEDREIEHL 473

Query: 112 VATVVDTQLRKLHCKVKHFEELQLIMEKEYTQIQELK 2
           VAT+++ Q+ KL  KVKHF+EL+L+MEKE+ +++ELK
Sbjct: 474 VATIIEAQVEKLQQKVKHFDELELLMEKEHAEMEELK 510