BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007380
         (2474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   622   e-175
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   602   e-169
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   601   e-169
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   585   e-164
ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containi...   529   e-147

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Vitis vinifera]
          Length = 662

 Score =  622 bits (1604), Expect = e-175
 Identities = 293/426 (68%), Positives = 364/426 (85%)
 Frame = -1

Query: 2474 NEVRPDETTVVSTLSACIALENLEFGKELHHYISQELDFTIILGNALMDMYAKCGSLSLA 2295
            + +RP+E TVVSTLSACIAL+ LE GKE+H Y+ ++L FTI +GNAL+DMY KCG LS+A
Sbjct: 228  SSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIA 287

Query: 2294 RHVFDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFD 2115
            R +F+ M IK VI WT++VSGYVNCG+L EARELF RSP +DVVLWTAMINGYVQFN FD
Sbjct: 288  REIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFD 347

Query: 2114 EALSLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLI 1935
            +A++LF++MQI+R+ PDR+T+VALLTGCAQLG LEQG+WIHGYI++N IM+DAVV T+LI
Sbjct: 348  DAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALI 407

Query: 1934 DMYAKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFSEMQQLGGKPDDI 1755
            +MYAKCG I+KSLEIF  +K KDTASWT+IICG AMNG+T+KALELF+EM Q G KPDDI
Sbjct: 408  EMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDI 467

Query: 1754 TYIGVLSACSHGGLVEEGRRNFEFMKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDK 1575
            T+IGVLSACSHGGLVEEGR++F  M  +YQI+PK+EHYGC++DLLGRAG LDEAE LI+K
Sbjct: 468  TFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEK 527

Query: 1574 IPNVHDEVLLPLWSSLLGACRIHNNVQMGERVAKHILEMESSNSGIHSLAANLYAAVNRW 1395
             PNV++EV++PL+ +LL ACR H NV+MGERVAK ++ +ES +S +H+L AN+YA+ +RW
Sbjct: 528  SPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRW 587

Query: 1394 EDVTKVRRKMKDLRVKKIPGCSSIEVTGIVHEFLVADTSHPMAREIYSLLNDMTXXXXXL 1215
            EDVTKVRRKMKDL VKK+PGCSS+EV GIVHEFLV D SHP  REIYS+L+ +      L
Sbjct: 588  EDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGL 647

Query: 1214 EENVVD 1197
            +EN ++
Sbjct: 648  DENEME 653



 Score =  115 bits (288), Expect = 6e-23
 Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
 Frame = -1

Query: 2462 PDETTVVSTLSACIALENLEFGKELHHYISQE-LDFTIILGNALMDMYAKCGSLSLARHV 2286
            PD  T      A   L  +  G++++ ++ +  L+F   + N+LMDMYA+ G        
Sbjct: 130  PDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVG-------- 181

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
                                   ++   R++F   P +DVV W  +I+GYV+   +++A+
Sbjct: 182  -----------------------RVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAV 218

Query: 2105 SLFQDMQIR-RIKPDRYTVVALLTGCAQLGALEQGRWIHGYIED--------NNIMMD-- 1959
             +F+ MQ +  ++P+  TVV+ L+ C  L  LE G+ IH Y+ +         N ++D  
Sbjct: 219  DVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMY 278

Query: 1958 --------------------AVVSTSLIDMYAKCGCIDKSLEIFKRIKTKDTASWTAIIC 1839
                                 +  TS++  Y  CG +D++ E+F+R   +D   WTA+I 
Sbjct: 279  CKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMIN 338

Query: 1838 GFAMNGQTNKALELFSEMQQLGGKPDDITYIGVLSACSHGGLVEEGR 1698
            G+    + + A+ LF EMQ     PD  T + +L+ C+  G +E+G+
Sbjct: 339  GYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGK 385



 Score =  103 bits (256), Expect = 3e-19
 Identities = 70/292 (23%), Positives = 139/292 (47%), Gaps = 2/292 (0%)
 Frame = -1

Query: 2219 GKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEALSLFQDMQIRRIKPDRYTVVALL 2040
            G LH A  +FN      + ++  +I  + +   F +A+ LF+ ++   + PD +T   + 
Sbjct: 80   GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139

Query: 2039 TGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMYAKCGCIDKSLEIFKRIKTKDTA 1860
                 LG + +G  ++G++  + +  D  V  SL+DMYA+ G +    ++F+ +  +D  
Sbjct: 140  KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199

Query: 1859 SWTAIICGFAMNGQTNKALELFSEMQQLGG-KPDDITYIGVLSACSHGGLVEEGRRNFEF 1683
            SW  +I G+    +   A+++F  MQQ    +P++ T +  LSAC    ++E G+    +
Sbjct: 200  SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259

Query: 1682 MKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPNVHDEVLLPLWSSLLGACRIHN 1503
            ++   Q+   I+    +VD+  + G L  A  + + +P       +  W+S++      N
Sbjct: 260  VRE--QLGFTIKIGNALVDMYCKCGHLSIAREIFNDMP----IKTVICWTSMVSG--YVN 311

Query: 1502 NVQMGERVAKHILEMESSNSGI-HSLAANLYAAVNRWEDVTKVRRKMKDLRV 1350
              Q+ E  A+ + E       +  +   N Y   NR++D   + R+M+  RV
Sbjct: 312  CGQLDE--ARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRV 361


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Cucumis sativus]
          Length = 781

 Score =  602 bits (1553), Expect = e-169
 Identities = 282/423 (66%), Positives = 360/423 (85%)
 Frame = -1

Query: 2465 RPDETTVVSTLSACIALENLEFGKELHHYISQELDFTIILGNALMDMYAKCGSLSLARHV 2286
            +PDE TVVSTLSAC AL+NLE G E+H+Y+ +EL FT  + NAL+DMYAKCG L++AR++
Sbjct: 342  KPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNI 401

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
            FD+M +KNVI WT+++SGY+NCG L EAR+LF++SP +DVVLWTAMINGYVQF+ FD+A+
Sbjct: 402  FDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAV 461

Query: 2105 SLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMY 1926
            +LF++MQI+R+KPD++TVV LLTGCAQLGALEQG+WIHGY+++N I MD VV T+LI+MY
Sbjct: 462  ALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMY 521

Query: 1925 AKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFSEMQQLGGKPDDITYI 1746
            +KCGC+DKSLEIF  ++ KDTASWT+IICG AMNG+T++AL LFSEM+++G KPDDIT+I
Sbjct: 522  SKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFI 581

Query: 1745 GVLSACSHGGLVEEGRRNFEFMKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPN 1566
            GVLSACSHGGLVEEGRR F  MK +++I+PK+EHYGCV+DLLGRAGLLDEAE LI +IP 
Sbjct: 582  GVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPI 641

Query: 1565 VHDEVLLPLWSSLLGACRIHNNVQMGERVAKHILEMESSNSGIHSLAANLYAAVNRWEDV 1386
             + E+++PL+ +LL ACRIHNNV MGER+AK +  +ES +S IH+L AN+YA+V+RWED 
Sbjct: 642  ENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDA 701

Query: 1385 TKVRRKMKDLRVKKIPGCSSIEVTGIVHEFLVADTSHPMAREIYSLLNDMTXXXXXLEEN 1206
             KVRRKMK+L VKK+PGCS IEV GIVHEFLV D SHP   EI S+LN +T     L+E+
Sbjct: 702  KKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKES 761

Query: 1205 VVD 1197
             V+
Sbjct: 762  QVE 764



 Score =  113 bits (283), Expect = 2e-22
 Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 33/288 (11%)
 Frame = -1

Query: 2462 PDETTVVSTLSACIALENLEFGKELHHYISQE-LDFTIILGNALMDMYAKCGSLSLARHV 2286
            PD  T    L A   L ++  G+++  +I +  +D    + N+L+DMY +  ++  A+ +
Sbjct: 241  PDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKL 300

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
            FD+M  ++ +SW  ++SGYV C +                               F++A+
Sbjct: 301  FDEMTTRDSVSWNVMISGYVRCRR-------------------------------FEDAI 329

Query: 2105 SLFQDMQIR-RIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDM 1929
            + F++MQ     KPD  TVV+ L+ C  L  LE G  IH Y+    +     +  +L+DM
Sbjct: 330  NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR-KELGFTTRIDNALLDM 388

Query: 1928 YAKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFS-------------- 1791
            YAKCGC++ +  IF  +  K+   WT++I G+   G   +A +LF               
Sbjct: 389  YAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMI 448

Query: 1790 -----------------EMQQLGGKPDDITYIGVLSACSHGGLVEEGR 1698
                             EMQ    KPD  T + +L+ C+  G +E+G+
Sbjct: 449  NGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGK 496



 Score =  100 bits (248), Expect = 2e-18
 Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 3/294 (1%)
 Frame = -1

Query: 2219 GKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEALSLFQDMQIRRIKPDRYTVVALL 2040
            G L  A ++FN      + ++  M+  Y +     + L LFQ ++   + PD +T   +L
Sbjct: 191  GNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 250

Query: 2039 TGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMYAKCGCIDKSLEIFKRIKTKDTA 1860
                 L  + QG  + G+I    + +D  V  SLIDMY +   ++ + ++F  + T+D+ 
Sbjct: 251  KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 310

Query: 1859 SWTAIICGFAMNGQTNKALELFSEMQQLGG-KPDDITYIGVLSACSHGGLVEEGRRNFEF 1683
            SW  +I G+    +   A+  F EMQQ G  KPD+ T +  LSAC+    +E G     +
Sbjct: 311  SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 370

Query: 1682 MKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPNVHDEVLLPLWSSLLGACRIHN 1503
            ++       +I++   ++D+  + G L+ A  + D++   +    +  W+S+     I  
Sbjct: 371  VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMKN----VICWTSM-----ISG 419

Query: 1502 NVQMGE-RVAKHILEMESSNSGI-HSLAANLYAAVNRWEDVTKVRRKMKDLRVK 1347
             +  G+ R A+ + +       +  +   N Y   + ++D   + R+M+  RVK
Sbjct: 420  YINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVK 473



 Score = 88.6 bits (218), Expect = 7e-15
 Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
 Frame = -1

Query: 2468 VRPDETTVVSTLSACIALENLEFGKELHHYISQ-ELDFTIILGNALMDMYAKCGSLSLAR 2292
            V+PD+ TVV+ L+ C  L  LE GK +H Y+ +  +   +++G AL++MY+KCG +  + 
Sbjct: 472  VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 531

Query: 2291 HVFDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDE 2112
             +F +++ K+  SWT+I+ G    GK                                 E
Sbjct: 532  EIFYELEDKDTASWTSIICGLAMNGKT-------------------------------SE 560

Query: 2111 ALSLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQG-RWIHGYIEDNNIMMDAVVSTSLI 1935
            AL LF +M+    KPD  T + +L+ C+  G +E+G R+ +   + + I         +I
Sbjct: 561  ALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVI 620

Query: 1934 DMYAKCGCIDKSLEIFKRI 1878
            D+  + G +D++ E+ + I
Sbjct: 621  DLLGRAGLLDEAEELIQEI 639


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  601 bits (1549), Expect = e-169
 Identities = 282/423 (66%), Positives = 360/423 (85%)
 Frame = -1

Query: 2465 RPDETTVVSTLSACIALENLEFGKELHHYISQELDFTIILGNALMDMYAKCGSLSLARHV 2286
            +PDE TVVSTLSAC AL+NLE G E+H+Y+ +EL FT  + NAL+DMYAKCG L++AR++
Sbjct: 296  KPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNI 355

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
            FD+M +KNVI WT+++SGY+NCG L EAR+LF++SP +DVVLWTAMINGYVQF+ FD+A+
Sbjct: 356  FDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAV 415

Query: 2105 SLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMY 1926
            +LF++MQI++IKPD++TVV LLTGCAQLGALEQG+WIHGY+++N I MD VV T+LI+MY
Sbjct: 416  ALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMY 475

Query: 1925 AKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFSEMQQLGGKPDDITYI 1746
            +KCGC+DKSLEIF  ++ KDTASWT+IICG AMNG+T++AL LFSEM+++G KPDDIT+I
Sbjct: 476  SKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFI 535

Query: 1745 GVLSACSHGGLVEEGRRNFEFMKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPN 1566
            GVLSACSHGGLVEEGRR F  MK +++I+PK+EHYGCV+DLLGRAGLLDEAE LI +IP 
Sbjct: 536  GVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPI 595

Query: 1565 VHDEVLLPLWSSLLGACRIHNNVQMGERVAKHILEMESSNSGIHSLAANLYAAVNRWEDV 1386
             + E+++PL+ +LL ACRIHNNV MGER+AK +  +ES +S IH+L AN+YA+V+RWED 
Sbjct: 596  ENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDA 655

Query: 1385 TKVRRKMKDLRVKKIPGCSSIEVTGIVHEFLVADTSHPMAREIYSLLNDMTXXXXXLEEN 1206
             KVRRKMK+L VKK+PGCS IEV GIVHEFLV D SHP   EI S+LN +T     L+E+
Sbjct: 656  KKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQLLGLKES 715

Query: 1205 VVD 1197
             V+
Sbjct: 716  QVE 718



 Score =  113 bits (282), Expect = 3e-22
 Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 33/288 (11%)
 Frame = -1

Query: 2462 PDETTVVSTLSACIALENLEFGKELHHYISQE-LDFTIILGNALMDMYAKCGSLSLARHV 2286
            PD  T    L A   L ++  G+++  +I +  +D    + N+L+DMY +  ++  A+ +
Sbjct: 195  PDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKL 254

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
            FD+M  ++ +SW  ++SGYV C +                               F++A+
Sbjct: 255  FDEMTTRDSVSWNVMISGYVRCRR-------------------------------FEDAI 283

Query: 2105 SLFQDMQIR-RIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDM 1929
            + F++MQ     KPD  TVV+ L+ C  L  LE G  IH Y+    +     +  +L+DM
Sbjct: 284  NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR-KELGFTTRIDNALLDM 342

Query: 1928 YAKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFS-------------- 1791
            YAKCGC++ +  IF  +  K+   WT++I G+   G   +A +LF               
Sbjct: 343  YAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMI 402

Query: 1790 -----------------EMQQLGGKPDDITYIGVLSACSHGGLVEEGR 1698
                             EMQ    KPD  T + +L+ C+  G +E+G+
Sbjct: 403  NGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGK 450



 Score = 98.2 bits (243), Expect = 9e-18
 Identities = 70/294 (23%), Positives = 138/294 (46%), Gaps = 3/294 (1%)
 Frame = -1

Query: 2219 GKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEALSLFQDMQIRRIKPDRYTVVALL 2040
            G L  A ++FN      + ++  M+  Y +     + L LFQ ++   + PD +T   +L
Sbjct: 145  GNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 204

Query: 2039 TGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMYAKCGCIDKSLEIFKRIKTKDTA 1860
                 L  + QG  + G+I    + +D  V  SLIDMY +   ++ + ++F  + T+D+ 
Sbjct: 205  KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 264

Query: 1859 SWTAIICGFAMNGQTNKALELFSEMQQLGG-KPDDITYIGVLSACSHGGLVEEGRRNFEF 1683
            SW  +I G+    +   A+  F EMQQ G  KPD+ T +  LSAC+    +E G     +
Sbjct: 265  SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 324

Query: 1682 MKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPNVHDEVLLPLWSSLLGACRIHN 1503
            ++       +I++   ++D+  + G L+ A  + D++   +    +  W+S+     I  
Sbjct: 325  VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMKN----VICWTSM-----ISG 373

Query: 1502 NVQMGE-RVAKHILEMESSNSGI-HSLAANLYAAVNRWEDVTKVRRKMKDLRVK 1347
             +  G+ R A+ + +       +  +   N Y   + ++D   + R+M+  ++K
Sbjct: 374  YINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIK 427



 Score = 88.6 bits (218), Expect = 7e-15
 Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
 Frame = -1

Query: 2471 EVRPDETTVVSTLSACIALENLEFGKELHHYISQ-ELDFTIILGNALMDMYAKCGSLSLA 2295
            +++PD+ TVV+ L+ C  L  LE GK +H Y+ +  +   +++G AL++MY+KCG +  +
Sbjct: 425  KIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKS 484

Query: 2294 RHVFDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFD 2115
              +F +++ K+  SWT+I+ G    GK                                 
Sbjct: 485  LEIFYELEDKDTASWTSIICGLAMNGKT-------------------------------S 513

Query: 2114 EALSLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQG-RWIHGYIEDNNIMMDAVVSTSL 1938
            EAL LF +M+    KPD  T + +L+ C+  G +E+G R+ +   + + I         +
Sbjct: 514  EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 573

Query: 1937 IDMYAKCGCIDKSLEIFKRI 1878
            ID+  + G +D++ E+ + I
Sbjct: 574  IDLLGRAGLLDEAEELIQEI 593


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  585 bits (1508), Expect = e-164
 Identities = 279/422 (66%), Positives = 346/422 (81%)
 Frame = -1

Query: 2462 PDETTVVSTLSACIALENLEFGKELHHYISQELDFTIILGNALMDMYAKCGSLSLARHVF 2283
            PDE TVVSTLSAC AL+ LE GK++HHY+   + FT I+GNAL+DMY KCG LS+AR VF
Sbjct: 237  PDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVF 296

Query: 2282 DKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEALS 2103
            ++M  KNVI WTT+VSGY NCG+L EARELF  SP +DVV+WTAMINGYVQFN FDEA++
Sbjct: 297  EEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVA 356

Query: 2102 LFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMYA 1923
            LF++MQIR++KPD++ VV+LLTGCAQ GA+EQG+WIH +I++N I +DAVV T+LI+MYA
Sbjct: 357  LFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYA 416

Query: 1922 KCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFSEMQQLGGKPDDITYIG 1743
            KCG I+K+LEIF  ++ KDTASWT+IICG AMNG+T+KALELFS+M+Q G +PDDIT+IG
Sbjct: 417  KCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIG 476

Query: 1742 VLSACSHGGLVEEGRRNFEFMKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPNV 1563
            VLSACSHGGLVEEGR+ F  M+  YQIKPK+EHYGC+VDLLGRAGLL+EAE LI KIP+ 
Sbjct: 477  VLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDE 536

Query: 1562 HDEVLLPLWSSLLGACRIHNNVQMGERVAKHILEMESSNSGIHSLAANLYAAVNRWEDVT 1383
            +  + +PL+ SLL ACRI+ NV+MGERVAK +++ ESS+S +H+L AN+YA  +RWEDVT
Sbjct: 537  NKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVT 596

Query: 1382 KVRRKMKDLRVKKIPGCSSIEVTGIVHEFLVADTSHPMAREIYSLLNDMTXXXXXLEENV 1203
            KVRRKMKDL VKK PGCSSIEV  I+HEF     SHP  REIY +LN M        +N 
Sbjct: 597  KVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPLLGSAKNE 656

Query: 1202 VD 1197
            ++
Sbjct: 657  ME 658



 Score =  121 bits (304), Expect = 8e-25
 Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 33/294 (11%)
 Frame = -1

Query: 2462 PDETTVVSTLSACIALENLEFGKELHHYISQE-LDFTIILGNALMDMYAKCGSLSLARHV 2286
            PD  T      A   L  +   ++L   +++  L+F   + N+L+DMYA+     + + +
Sbjct: 135  PDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKML 194

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
            FD+M                               P +DV+ W  MI+GYV+   F++A+
Sbjct: 195  FDEM-------------------------------PDRDVISWNVMISGYVKCRRFEDAI 223

Query: 2105 SLFQDMQIRR-IKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDM 1929
            ++F  MQ    + PD  TVV+ L+ C  L  LE G+ IH Y+ D N+    ++  +L+DM
Sbjct: 224  NVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRD-NVKFTPIIGNALLDM 282

Query: 1928 YAKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFS-------------- 1791
            Y KCGC+  +  +F+ + +K+   WT ++ G+A  G+  +A ELF               
Sbjct: 283  YCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMI 342

Query: 1790 -----------------EMQQLGGKPDDITYIGVLSACSHGGLVEEGRRNFEFM 1680
                             EMQ    KPD    + +L+ C+  G +E+G+   EF+
Sbjct: 343  NGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFI 396



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 70/321 (21%), Positives = 143/321 (44%), Gaps = 12/321 (3%)
 Frame = -1

Query: 2219 GKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEALSLFQDMQIRRIKPDRYTVVALL 2040
            G L+ A ++F       ++++  +I  + +   +   L LF  ++   + PD +T   + 
Sbjct: 85   GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144

Query: 2039 TGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMYAKCGCIDKSLEIFKRIKTKDTA 1860
                 LG + +   + G +    +  D  V  SLIDMYA+    D    +F  +  +D  
Sbjct: 145  KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVI 204

Query: 1859 SWTAIICGFAMNGQTNKALELFSEMQQLGG-KPDDITYIGVLSACSHGGLVEEGRRNFEF 1683
            SW  +I G+    +   A+ +F  MQ+  G  PD+ T +  LSAC+    +E G++   +
Sbjct: 205  SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY 264

Query: 1682 MKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPNVHDEVLLPLWSSLLGACRIHN 1503
            ++   +  P I +   ++D+  + G L  A  + +++P+ +    +  W++++     + 
Sbjct: 265  VRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMPSKN----VICWTTMVSG---YA 315

Query: 1502 NVQMGERVAKHILEMESSNSGIHSLAANLYAAVNRWEDVTKVRRKMKDLRVKK------- 1344
            N    E   +        +  I +   N Y   NR+++   + R+M+  +VK        
Sbjct: 316  NCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVS 375

Query: 1343 -IPGCS---SIEVTGIVHEFL 1293
             + GC+   +IE    +HEF+
Sbjct: 376  LLTGCAQTGAIEQGKWIHEFI 396



 Score = 88.6 bits (218), Expect = 7e-15
 Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
 Frame = -1

Query: 2471 EVRPDETTVVSTLSACIALENLEFGKELHHYISQ-ELDFTIILGNALMDMYAKCGSLSLA 2295
            +V+PD+  VVS L+ C     +E GK +H +I +  +    ++G AL++MYAKCG +  A
Sbjct: 365  KVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKA 424

Query: 2294 RHVFDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFD 2115
              +F  +++K+  SWT+I+ G    GK  +A ELF++                       
Sbjct: 425  LEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSK----------------------- 461

Query: 2114 EALSLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTS-- 1941
                    M+   ++PD  T + +L+ C+  G +E+GR        N++ M+  +     
Sbjct: 462  --------MKQAGVRPDDITFIGVLSACSHGGLVEEGRKFF-----NSMRMEYQIKPKVE 508

Query: 1940 ----LIDMYAKCGCIDKSLEIFKRIKTKDTA 1860
                L+D+  + G ++++ E+ K+I  ++ A
Sbjct: 509  HYGCLVDLLGRAGLLNEAEELIKKIPDENKA 539


>ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Glycine max]
          Length = 591

 Score =  529 bits (1362), Expect = e-147
 Identities = 246/385 (63%), Positives = 316/385 (82%)
 Frame = -1

Query: 2465 RPDETTVVSTLSACIALENLEFGKELHHYISQELDFTIILGNALMDMYAKCGSLSLARHV 2286
            +P+E TVVSTLSAC  L NLE GKE+H YI+ ELD T I+GNAL+DMY KCG +S+AR +
Sbjct: 207  KPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPIMGNALLDMYCKCGCVSVAREI 266

Query: 2285 FDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDEAL 2106
            FD M +KNV  WT++V+GYV CG+L +AR LF RSPS+DVVLWTAMINGYVQFN F++A+
Sbjct: 267  FDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAI 326

Query: 2105 SLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLIDMY 1926
            +LF +MQIR ++PD++ VV LLTGCAQLGALEQG+WIH YI++N I MDAVVST+LI+MY
Sbjct: 327  ALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMY 386

Query: 1925 AKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNKALELFSEMQQLGGKPDDITYI 1746
            AKCGCI+KSLEIF  +K  DT SWT+IICG AMNG+T++ALELF  MQ  G KPDDIT++
Sbjct: 387  AKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFV 446

Query: 1745 GVLSACSHGGLVEEGRRNFEFMKTIYQIKPKIEHYGCVVDLLGRAGLLDEAERLIDKIPN 1566
             VLSAC H GLVEEGR+ F  M +IY I+P +EHYGC +DLLGRAGLL EAE L+ K+P+
Sbjct: 447  AVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPD 506

Query: 1565 VHDEVLLPLWSSLLGACRIHNNVQMGERVAKHILEMESSNSGIHSLAANLYAAVNRWEDV 1386
             ++E+++PL+ +LL ACR + N+ MGER+A  + +++SS+S +H+L A++YA+ +RWEDV
Sbjct: 507  QNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDV 566

Query: 1385 TKVRRKMKDLRVKKIPGCSSIEVTG 1311
             KVR KMKDL +KK+PG S+IEV G
Sbjct: 567  RKVRSKMKDLGIKKVPGYSAIEVDG 591



 Score =  123 bits (309), Expect = 2e-25
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 33/290 (11%)
 Frame = -1

Query: 2468 VRPDETTVVSTLSACIALENLEFGKELHHYISQE-LDFTIILGNALMDMYAKCGSLSLAR 2292
            V PD  T    L     +  +  G+++H ++ +  L+F   + N+LMDMYA+ G +    
Sbjct: 104  VWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFT 163

Query: 2291 HVFDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDE 2112
             VF++M  ++ +SW  ++SGYV C +                               F+E
Sbjct: 164  QVFEEMPERDAVSWNIMISGYVRCKR-------------------------------FEE 192

Query: 2111 ALSLFQDMQIR-RIKPDRYTVVALLTGCAQLGALEQGRWIHGYIEDNNIMMDAVVSTSLI 1935
            A+ +++ MQ+    KP+  TVV+ L+ CA L  LE G+ IH YI  N + +  ++  +L+
Sbjct: 193  AVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIA-NELDLTPIMGNALL 251

Query: 1934 DMYAKCGCIDKSLEIFKRIKTKDTASWTAIICGFAMNGQTNK------------------ 1809
            DMY KCGC+  + EIF  +  K+   WT+++ G+ + GQ ++                  
Sbjct: 252  DMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTA 311

Query: 1808 -------------ALELFSEMQQLGGKPDDITYIGVLSACSHGGLVEEGR 1698
                         A+ LF EMQ  G +PD    + +L+ C+  G +E+G+
Sbjct: 312  MINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGK 361



 Score =  109 bits (273), Expect = 3e-21
 Identities = 80/361 (22%), Positives = 164/361 (45%), Gaps = 18/361 (4%)
 Frame = -1

Query: 2351 ILGNALMDMYAKCGSLSLARHV------FDKMQIKNVISWTTIVSGYVNCGKLHEARELF 2190
            +L    + +   C S+S  + +      F   Q +++++     S   + G  + A  +F
Sbjct: 6    LLKGTYISLLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIF 65

Query: 2189 NRSPSKDVVLWTAMINGYVQFNCFDEALSLFQDMQIRRIKPDRYTVVALLTGCAQLGALE 2010
            N      + ++  MI  +V+      A+SLFQ ++ R + PD YT   +L G   +G + 
Sbjct: 66   NHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVR 125

Query: 2009 QGRWIHGYIEDNNIMMDAVVSTSLIDMYAKCGCIDKSLEIFKRIKTKDTASWTAIICGFA 1830
            +G  IH ++    +  D  V  SL+DMYA+ G ++   ++F+ +  +D  SW  +I G+ 
Sbjct: 126  EGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYV 185

Query: 1829 MNGQTNKALELFSEMQ-QLGGKPDDITYIGVLSACSHGGLVEEGRRNFEFMKTIYQIKPK 1653
               +  +A++++  MQ +   KP++ T +  LSAC+    +E G+   +++     + P 
Sbjct: 186  RCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPI 245

Query: 1652 IEHYGCVVDLLGRAGLLDEAERLIDK--IPNVHDEVLLPLWSSLLGACRIHNNVQMGERV 1479
            + +   ++D+  + G +  A  + D   + NV+       W+S++    I   +      
Sbjct: 246  MGN--ALLDMYCKCGCVSVAREIFDAMIVKNVN------CWTSMVTGYVICGQLDQ---- 293

Query: 1478 AKHILEMESSNSGI-HSLAANLYAAVNRWEDVTKVRRKM--------KDLRVKKIPGCSS 1326
            A+++ E   S   +  +   N Y   N +ED   +  +M        K + V  + GC+ 
Sbjct: 294  ARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQ 353

Query: 1325 I 1323
            +
Sbjct: 354  L 354



 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
 Frame = -1

Query: 2468 VRPDETTVVSTLSACIALENLEFGKELHHYISQ-ELDFTIILGNALMDMYAKCGSLSLAR 2292
            V PD+  VV+ L+ C  L  LE GK +H+YI +  +    ++  AL++MYAKCG +  + 
Sbjct: 337  VEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSL 396

Query: 2291 HVFDKMQIKNVISWTTIVSGYVNCGKLHEARELFNRSPSKDVVLWTAMINGYVQFNCFDE 2112
             +F+ ++  +  SWT+I+ G    GK                                 E
Sbjct: 397  EIFNGLKDMDTTSWTSIICGLAMNGKT-------------------------------SE 425

Query: 2111 ALSLFQDMQIRRIKPDRYTVVALLTGCAQLGALEQGRWI-HGYIEDNNIMMDAVVSTSLI 1935
            AL LF+ MQ   +KPD  T VA+L+ C   G +E+GR + H      +I  +       I
Sbjct: 426  ALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFI 485

Query: 1934 DMYAKCGCIDKSLEIFKRI 1878
            D+  + G + ++ E+ K++
Sbjct: 486  DLLGRAGLLQEAEELVKKL 504