BLASTX nr result

ID: Cimicifuga21_contig00007369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007369
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloro...   348   1e-93
ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus...   325   1e-86
ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloro...   312   9e-83
ref|NP_567805.1| Ribosomal protein L22p/L17e family protein [Ara...   302   1e-79
ref|XP_002322771.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79

>ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloroplastic [Vitis vinifera]
            gi|296089316|emb|CBI39088.3| unnamed protein product
            [Vitis vinifera]
          Length = 271

 Score =  348 bits (894), Expect = 1e-93
 Identities = 179/264 (67%), Positives = 205/264 (77%), Gaps = 4/264 (1%)
 Frame = +2

Query: 221  MVGWQRNLKSIIRHVGKRVQQNFGASINLSGAHANSPSLLGQSCYPSKTLYSSSKTL--- 391
            MVGWQR+L+++   +GKRV+ N+  S N S +   S  L+G+  Y  +     S T+   
Sbjct: 1    MVGWQRHLRNVFTQIGKRVEHNYNVSANFSCSRLESSPLVGELPYLQRLWKLPSATIPRP 60

Query: 392  -HQYLQQMGIXXXXXXXXXXXXXAVPSPFTPVLAIESGKTENQAAVSKASKVQAILKNIK 568
             + Y QQ+GI              V SP TP LA+  GKTE+Q  VSK SKVQA+LK IK
Sbjct: 61   YYYYFQQLGISSSRQLLADSDVTPVASPLTPALALNGGKTEDQKVVSKPSKVQAVLKGIK 120

Query: 569  QSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLI 748
            QSPKKVNLVA LVRGMRVEDALLQLQ+TVKRASKTVYQVIHSARANATHNHGLDPDRLL+
Sbjct: 121  QSPKKVNLVAELVRGMRVEDALLQLQLTVKRASKTVYQVIHSARANATHNHGLDPDRLLV 180

Query: 749  AEAFVGKGYFKKRVSYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRKLTK 928
            AEAFVGKG+FKKRVSYHAKGKCGIK RPECRLTVVVREMTPEEEA++A+LRVSNFRKL+K
Sbjct: 181  AEAFVGKGFFKKRVSYHAKGKCGIKVRPECRLTVVVREMTPEEEAKLAKLRVSNFRKLSK 240

Query: 929  RERRLVPHKLIETTPIWNRKGKTG 1000
            RE+RLVPH+LIETT IWNRK   G
Sbjct: 241  REKRLVPHQLIETTSIWNRKANGG 264


>ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus communis]
           gi|223536653|gb|EEF38295.1| 50S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 278

 Score =  325 bits (833), Expect = 1e-86
 Identities = 174/264 (65%), Positives = 202/264 (76%), Gaps = 8/264 (3%)
 Frame = +2

Query: 221 MVGWQRNLKSIIRHVGKRVQQNFGASINLSGAHANSPSLLGQSCYPS-KTLYSS-----S 382
           MVGWQR+L+ ++R VGKRV+ N+ A  N S + +   S L     P    L+ S     S
Sbjct: 1   MVGWQRHLQFLLRQVGKRVEHNYSAVSNFSSSSSCVESSLKPGDLPCLHRLWKSPSTNIS 60

Query: 383 KTLHQYLQQMGIXXXXXXXXXXXXXA-VPSPFTPVLA-IESGKTENQAAVSKASKVQAIL 556
           ++ +QYLQQ GI               + SP TP L  + SGKTE + A+ K SKVQA+L
Sbjct: 61  RSFYQYLQQSGISSSRKLLADSSEQTPIRSPLTPALTPLSSGKTEEKKAICKQSKVQAVL 120

Query: 557 KNIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPD 736
           KNIKQSPKKVNLVA LVRGMRVEDALLQLQVT+KRA+KTVYQVIHSARANATHNHGLDPD
Sbjct: 121 KNIKQSPKKVNLVAELVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPD 180

Query: 737 RLLIAEAFVGKGYFKKRVSYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFR 916
           RLL+AEAFVGKG FKKR+SYHAKG+ G+K R ECRLTVVVRE+TPEEEA++ARLRV NFR
Sbjct: 181 RLLVAEAFVGKGNFKKRISYHAKGRAGVKVRAECRLTVVVREITPEEEAKIARLRVHNFR 240

Query: 917 KLTKRERRLVPHKLIETTPIWNRK 988
           K TK+E+RLVPHKLIETTPIWNRK
Sbjct: 241 KRTKQEKRLVPHKLIETTPIWNRK 264


>ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis
           sativus]
          Length = 271

 Score =  312 bits (800), Expect = 9e-83
 Identities = 167/265 (63%), Positives = 202/265 (76%), Gaps = 7/265 (2%)
 Frame = +2

Query: 221 MVGWQRNLKSIIRHVGKRVQQNFGASINLSGAHANSPSLLGQSCYPSKTLYSSSKTLHQ- 397
           MVGWQR L+S++ H+  +V+ ++ A+ N S    +S S  G+  Y  + L  SS  + Q 
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSN-GELPYLQRLLKPSSAVIAQP 59

Query: 398 ---YLQQMGIXXXXXXXXXXXXXAVPSPFTPVLAIESGKT---ENQAAVSKASKVQAILK 559
               LQQMGI             AV SP T  LA+ SGK     +Q  + K S+VQA+LK
Sbjct: 60  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 119

Query: 560 NIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDR 739
            IKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+ANATHNHG+D DR
Sbjct: 120 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 179

Query: 740 LLIAEAFVGKGYFKKRVSYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRK 919
           LL+AEAFVGKG F+KR+SYHAKG+CG++ +PECRLTVV+RE TPEEEA++A+L+VSNFRK
Sbjct: 180 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 239

Query: 920 LTKRERRLVPHKLIETTPIWNRKGK 994
           LTKRE +LVPHKLIETTPIWNRKGK
Sbjct: 240 LTKREHQLVPHKLIETTPIWNRKGK 264


>ref|NP_567805.1| Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana]
           gi|21553938|gb|AAM63019.1| unknown [Arabidopsis
           thaliana] gi|107738381|gb|ABF83687.1| At4g28360
           [Arabidopsis thaliana] gi|110735706|dbj|BAE99833.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332660073|gb|AEE85473.1| Ribosomal protein L22p/L17e
           family protein [Arabidopsis thaliana]
          Length = 271

 Score =  302 bits (773), Expect = 1e-79
 Identities = 159/258 (61%), Positives = 195/258 (75%), Gaps = 1/258 (0%)
 Frame = +2

Query: 221 MVGWQRNLKSIIRHVGKRVQQNFGASINLSGAHANSPSLLGQSCYPSKTLYS-SSKTLHQ 397
           MVGW+RNL+++IR VG+RV+ +  ++ N S +  N  S   Q    S    S SS+ L+ 
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQGYLQSLLRPSYSSRPLYH 60

Query: 398 YLQQMGIXXXXXXXXXXXXXAVPSPFTPVLAIESGKTENQAAVSKASKVQAILKNIKQSP 577
           +LQQ+GI              V SP +    + SGK E Q  + K  KVQA+LK+IKQSP
Sbjct: 61  HLQQLGISTSRQLQASEEP--VSSPLSSPALLGSGKEEEQKIIPKRQKVQAVLKSIKQSP 118

Query: 578 KKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLIAEA 757
           KKVNLVAALVRGMRVEDAL+QLQVTVKRA++TVY+VIH+ARANATHNHGLDPDRLL+AEA
Sbjct: 119 KKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPDRLLVAEA 178

Query: 758 FVGKGYFKKRVSYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRKLTKRER 937
           FVGKG F K+V+YHAKG+ GI   P CRLTV+VRE TPEEEAE+ARL+V NF+K +KRER
Sbjct: 179 FVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFKKKSKRER 238

Query: 938 RLVPHKLIETTPIWNRKG 991
           +LVPHKLIET+PIWNR+G
Sbjct: 239 QLVPHKLIETSPIWNRRG 256


>ref|XP_002322771.1| predicted protein [Populus trichocarpa] gi|222867401|gb|EEF04532.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  301 bits (771), Expect = 2e-79
 Identities = 151/177 (85%), Positives = 166/177 (93%)
 Frame = +2

Query: 461 VPSPFTPVLAIESGKTENQAAVSKASKVQAILKNIKQSPKKVNLVAALVRGMRVEDALLQ 640
           V SPFTP+LA+ESGKTE Q AVSK  KVQA+LK IK SPKK+NLVAALVRGMRVEDALLQ
Sbjct: 18  VSSPFTPMLALESGKTE-QKAVSKPEKVQAVLKGIKMSPKKLNLVAALVRGMRVEDALLQ 76

Query: 641 LQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLIAEAFVGKGYFKKRVSYHAKGKCGI 820
           LQVTVKRA+KTV+QVIHSARANATHNHGLDPDRLL+AEAFVGKG+FKKR+SYHAKGKCGI
Sbjct: 77  LQVTVKRAAKTVFQVIHSARANATHNHGLDPDRLLVAEAFVGKGFFKKRISYHAKGKCGI 136

Query: 821 KERPECRLTVVVREMTPEEEAEVARLRVSNFRKLTKRERRLVPHKLIETTPIWNRKG 991
           +ERPE RLTVVVRE TPEEEA++A+LRV NFRKLTK+ER+LVPHKLIETT IWNRKG
Sbjct: 137 RERPESRLTVVVRETTPEEEAKIAKLRVHNFRKLTKKERQLVPHKLIETTSIWNRKG 193


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