BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007349
         (2078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   631   e-178
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              631   e-178
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   599   e-168
ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|2...   590   e-166
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   588   e-165

>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  631 bits (1627), Expect = e-178
 Identities = 307/442 (69%), Positives = 363/442 (82%)
 Frame = -3

Query: 1821 ITKELRKDPQKESLSLIQRLDLHFSQIKPTPSLLLQVLNQSPNAGRSVLELHQWVSNRPG 1642
            ++ EL KDP  E + +IQRL L FS I P+P L+LQ LN SP+AGR+VL  ++W+S+ P 
Sbjct: 77   LSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPK 136

Query: 1641 FKHNDETYSYLVDYFGRRKDFKAIHDVLVDGRGVTGTKTLAASIDRLVRAGRDAQTVAFF 1462
            F H+DET S+ VDYFGRRKDFKAIH+VL+DGR   G KTL ++IDRLVRAGR  Q V+FF
Sbjct: 137  FVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFF 196

Query: 1461 EKMEKDYGFVRNRESLKMVVAALCEHGFASYAEKMVKNLANEIFPDEAICDLLVRGWCVD 1282
            ++ME DYGF R+RESL MVV+ LCEHGFAS+AEK+VKN+ANEIFP+E ICDLL++GWCVD
Sbjct: 197  DRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVD 256

Query: 1281 GKLDEAKRLAGEIYRGGFELGAVAYNSVLDCVCKLCRKKDPFQLESEIEKVLIDMDFAGV 1102
            GKLDEA+RLA E++RGGFE+G +AYNS+LDC+CKLCRKKDPF+LESE EK+L+DMD AGV
Sbjct: 257  GKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGV 316

Query: 1101 PRNTETFNVLITNLCAIRKTEEAFKLFDRMGEWGCSPDSKTYLVLIKSLYHAARIGEGDE 922
            PRN ETFNVLITNLC IRKTE+A KLF RMGEWGC P+  T+LVL +SLY AAR+GEGDE
Sbjct: 317  PRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDE 376

Query: 921  MIDRMKSAGFGDALDKKAYYGFLKVLCGIERIEHAMKVFTKMKNDGCEPGIKTYDLLMGK 742
            MIDRMKSAGFG+ALDKKAYY F+K+LCGIERI+HAM +F+KMK DGC+PGIKTYDLLMGK
Sbjct: 377  MIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGK 436

Query: 741  LCAHGQVERANALFKRAKKRGVPVTHKVYKLDPRFXXXXXXXXXXXXKRETLPEKMAXXX 562
            LCAHG++++ANALF  A  RGVPV  K YKLDPRF            KRETLPEKMA   
Sbjct: 437  LCAHGRLDKANALFSEAVNRGVPVESKAYKLDPRF-VKKPTVAKKEKKRETLPEKMARKR 495

Query: 561  XXXXXXXLSFVKKPKKTMRRAF 496
                   LSFVKKPK+ MRRAF
Sbjct: 496  RRLRKIRLSFVKKPKR-MRRAF 516


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  631 bits (1627), Expect = e-178
 Identities = 307/442 (69%), Positives = 363/442 (82%)
 Frame = -3

Query: 1821 ITKELRKDPQKESLSLIQRLDLHFSQIKPTPSLLLQVLNQSPNAGRSVLELHQWVSNRPG 1642
            ++ EL KDP  E + +IQRL L FS I P+P L+LQ LN SP+AGR+VL  ++W+S+ P 
Sbjct: 93   LSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPK 152

Query: 1641 FKHNDETYSYLVDYFGRRKDFKAIHDVLVDGRGVTGTKTLAASIDRLVRAGRDAQTVAFF 1462
            F H+DET S+ VDYFGRRKDFKAIH+VL+DGR   G KTL ++IDRLVRAGR  Q V+FF
Sbjct: 153  FVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFF 212

Query: 1461 EKMEKDYGFVRNRESLKMVVAALCEHGFASYAEKMVKNLANEIFPDEAICDLLVRGWCVD 1282
            ++ME DYGF R+RESL MVV+ LCEHGFAS+AEK+VKN+ANEIFP+E ICDLL++GWCVD
Sbjct: 213  DRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVD 272

Query: 1281 GKLDEAKRLAGEIYRGGFELGAVAYNSVLDCVCKLCRKKDPFQLESEIEKVLIDMDFAGV 1102
            GKLDEA+RLA E++RGGFE+G +AYNS+LDC+CKLCRKKDPF+LESE EK+L+DMD AGV
Sbjct: 273  GKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGV 332

Query: 1101 PRNTETFNVLITNLCAIRKTEEAFKLFDRMGEWGCSPDSKTYLVLIKSLYHAARIGEGDE 922
            PRN ETFNVLITNLC IRKTE+A KLF RMGEWGC P+  T+LVL +SLY AAR+GEGDE
Sbjct: 333  PRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDE 392

Query: 921  MIDRMKSAGFGDALDKKAYYGFLKVLCGIERIEHAMKVFTKMKNDGCEPGIKTYDLLMGK 742
            MIDRMKSAGFG+ALDKKAYY F+K+LCGIERI+HAM +F+KMK DGC+PGIKTYDLLMGK
Sbjct: 393  MIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGK 452

Query: 741  LCAHGQVERANALFKRAKKRGVPVTHKVYKLDPRFXXXXXXXXXXXXKRETLPEKMAXXX 562
            LCAHG++++ANALF  A  RGVPV  K YKLDPRF            KRETLPEKMA   
Sbjct: 453  LCAHGRLDKANALFSEAVNRGVPVESKAYKLDPRF-VKKPTVAKKEKKRETLPEKMARKR 511

Query: 561  XXXXXXXLSFVKKPKKTMRRAF 496
                   LSFVKKPK+ MRRAF
Sbjct: 512  RRLRKIRLSFVKKPKR-MRRAF 532


>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Glycine max]
          Length = 509

 Score =  599 bits (1544), Expect = e-168
 Identities = 294/488 (60%), Positives = 357/488 (73%)
 Frame = -3

Query: 1965 STPQPHNHHLLIPPSNXXXXXXXXXXXXXXSLGNKNKHLTVTEGAVKLITKELRKDPQKE 1786
            ++P P +H  L P  +               +       T T+     ++ EL K+P  +
Sbjct: 22   TSPSPIHHSPLFPRHSSSHFYSRTLFTPSFFITRHFSSETQTDEIASSLSSELLKEPDSD 81

Query: 1785 SLSLIQRLDLHFSQIKPTPSLLLQVLNQSPNAGRSVLELHQWVSNRPGFKHNDETYSYLV 1606
            +LS+ QRL+L FS I PTP+L+LQ LN SP AGR+VL  HQW+S+ P F H D+T SY V
Sbjct: 82   ALSVSQRLNLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYFV 141

Query: 1605 DYFGRRKDFKAIHDVLVDGRGVTGTKTLAASIDRLVRAGRDAQTVAFFEKMEKDYGFVRN 1426
            DYFGRRKDFKA HDVL       G KTLA++IDRLVRAGR +Q V FFE+ME+DYG  R+
Sbjct: 142  DYFGRRKDFKATHDVLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRD 201

Query: 1425 RESLKMVVAALCEHGFASYAEKMVKNLANEIFPDEAICDLLVRGWCVDGKLDEAKRLAGE 1246
            R+SLK+VV  LC  GFASYAEKMVK+LA E FPDEA CD+L+RGWC+DGKLDEA+RLAGE
Sbjct: 202  RDSLKVVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGKLDEAQRLAGE 261

Query: 1245 IYRGGFELGAVAYNSVLDCVCKLCRKKDPFQLESEIEKVLIDMDFAGVPRNTETFNVLIT 1066
            +YRGGF+LG  AYN++LDCVCKLCR+KDPFQL SE EKVL++M++ GVPRNTETFNVLIT
Sbjct: 262  MYRGGFDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPRNTETFNVLIT 321

Query: 1065 NLCAIRKTEEAFKLFDRMGEWGCSPDSKTYLVLIKSLYHAARIGEGDEMIDRMKSAGFGD 886
            NLC IRKTE+A  L   MGEWGC P+  T+LVLI+SLY AAR+ EGDEMIDRM+SAGFG+
Sbjct: 322  NLCKIRKTEDALGLLHSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGE 381

Query: 885  ALDKKAYYGFLKVLCGIERIEHAMKVFTKMKNDGCEPGIKTYDLLMGKLCAHGQVERANA 706
             LDKKAYY FLK+LCGIER++HA+ VF  MK+DGCEPG+ TYDLLMGKL AH ++++ NA
Sbjct: 382  FLDKKAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLMGKLGAHNRIDKVNA 441

Query: 705  LFKRAKKRGVPVTHKVYKLDPRFXXXXXXXXXXXXKRETLPEKMAXXXXXXXXXXLSFVK 526
            LF  AK RG+PV  K Y +DPR+            KRETLPEKMA          LS+VK
Sbjct: 442  LFNEAKSRGLPVILKEYAVDPRYLKKKKKVVKGVKKRETLPEKMARKRSRLKQIRLSYVK 501

Query: 525  KPKKTMRR 502
            KPK+ M R
Sbjct: 502  KPKRVMGR 509


>ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|222844657|gb|EEE82204.1|
            predicted protein [Populus trichocarpa]
          Length = 516

 Score =  590 bits (1520), Expect = e-166
 Identities = 285/448 (63%), Positives = 348/448 (77%), Gaps = 4/448 (0%)
 Frame = -3

Query: 1830 VKLITKELRKDPQKESLSLIQRLDLHFSQIKP----TPSLLLQVLNQSPNAGRSVLELHQ 1663
            V+ ++ E+ +DP  + LS+ +RL L FS +      TPSL+LQ L  SP+AGR+V+  H 
Sbjct: 69   VQSLSTEISRDPNTDPLSISERLHLSFSHLTKNNALTPSLVLQTLKLSPDAGRTVIGFHN 128

Query: 1662 WVSNRPGFKHNDETYSYLVDYFGRRKDFKAIHDVLVDGRGVTGTKTLAASIDRLVRAGRD 1483
            W+     F+ NDE+ +  VDYFGRRKDFKA HD+LV+G+ V G K   + IDRLVRAGR 
Sbjct: 129  WLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEGKSVAGVKCFESMIDRLVRAGRT 188

Query: 1482 AQTVAFFEKMEKDYGFVRNRESLKMVVAALCEHGFASYAEKMVKNLANEIFPDEAICDLL 1303
             Q + FFE+ME+DYGF R++ESL  VV  LCE+G+ASYAEKMVKNLANEIFPD+ ICDLL
Sbjct: 189  TQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASYAEKMVKNLANEIFPDDGICDLL 248

Query: 1302 VRGWCVDGKLDEAKRLAGEIYRGGFELGAVAYNSVLDCVCKLCRKKDPFQLESEIEKVLI 1123
            ++GWCVDGKL+EAKRLAGE+YRGGFE+G +A+N++LDCVCKLCR+KDPF+LESE+EKVL+
Sbjct: 249  IKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAFNAMLDCVCKLCREKDPFRLESEVEKVLM 308

Query: 1122 DMDFAGVPRNTETFNVLITNLCAIRKTEEAFKLFDRMGEWGCSPDSKTYLVLIKSLYHAA 943
            +MD  GVPRN ETFNVLI+NLC +R+TE+A KLF R+GEWGC PD  T+LVLI+SLY AA
Sbjct: 309  EMDIRGVPRNVETFNVLISNLCKVRRTEDAMKLFSRIGEWGCCPDETTFLVLIRSLYQAA 368

Query: 942  RIGEGDEMIDRMKSAGFGDALDKKAYYGFLKVLCGIERIEHAMKVFTKMKNDGCEPGIKT 763
            R+GEGDEMIDRMKSAG+GD LDKKAYYGFLK+LCGIER+EHAM VF  MK DGC+PGIKT
Sbjct: 369  RVGEGDEMIDRMKSAGYGDKLDKKAYYGFLKILCGIERLEHAMSVFEMMKADGCKPGIKT 428

Query: 762  YDLLMGKLCAHGQVERANALFKRAKKRGVPVTHKVYKLDPRFXXXXXXXXXXXXKRETLP 583
            YDLLMGK C H ++++AN L+  A   GV VT K Y++DP+F            KRETLP
Sbjct: 429  YDLLMGKWCTHNRLDKANVLYNEALSNGVTVTPKEYRVDPKF-MKKPKAVKKEKKRETLP 487

Query: 582  EKMAXXXXXXXXXXLSFVKKPKKTMRRA 499
            EKMA          LSFVKKPKK MRRA
Sbjct: 488  EKMARKRRRLKQIRLSFVKKPKKGMRRA 515


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  588 bits (1517), Expect = e-165
 Identities = 283/444 (63%), Positives = 351/444 (79%), Gaps = 2/444 (0%)
 Frame = -3

Query: 1821 ITKELRKDPQKESLSLIQRLDLHFSQIKP--TPSLLLQVLNQSPNAGRSVLELHQWVSNR 1648
            I+ EL K+P  +SLS++QRL+LHFS I    TPS++LQ LN SP+AGR+VL  HQW+   
Sbjct: 127  ISAELIKNPNSDSLSILQRLNLHFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVKV 186

Query: 1647 PGFKHNDETYSYLVDYFGRRKDFKAIHDVLVDGRGVTGTKTLAASIDRLVRAGRDAQTVA 1468
              FK+ DET S+ +DYFGRRKDF++ H++L D + V G K   + ++RLVRAGR  + + 
Sbjct: 187  ANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDVIGYKCFESMVNRLVRAGRATKVMG 246

Query: 1467 FFEKMEKDYGFVRNRESLKMVVAALCEHGFASYAEKMVKNLANEIFPDEAICDLLVRGWC 1288
            FF++ME+DYGF R+RE+L++VV  LC++G+ASYAEKMVKNLANEIFPDE ICDLL++GWC
Sbjct: 247  FFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGWC 306

Query: 1287 VDGKLDEAKRLAGEIYRGGFELGAVAYNSVLDCVCKLCRKKDPFQLESEIEKVLIDMDFA 1108
            VDGKLDEAKRLAGE+YRGGFE+G VAYN++LDCVCKLCR+KDPF++ESE+EKVL++MD  
Sbjct: 307  VDGKLDEAKRLAGEMYRGGFEIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTR 366

Query: 1107 GVPRNTETFNVLITNLCAIRKTEEAFKLFDRMGEWGCSPDSKTYLVLIKSLYHAARIGEG 928
            GVPRN ETFNVLITNLC +RKT++A  LF+RM EWGC PD  T+LVLI+SLY AAR+GEG
Sbjct: 367  GVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEG 426

Query: 927  DEMIDRMKSAGFGDALDKKAYYGFLKVLCGIERIEHAMKVFTKMKNDGCEPGIKTYDLLM 748
            DEMIDRMKS+G+G+ LDKKAYYGFLK+LCGIER+EHA+ VF  MK DGC+PGIKTYDLL+
Sbjct: 427  DEMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLI 486

Query: 747  GKLCAHGQVERANALFKRAKKRGVPVTHKVYKLDPRFXXXXXXXXXXXXKRETLPEKMAX 568
            GK C   +V++ NALF  A + GVPV  K YK+D ++            KRETLPEKMA 
Sbjct: 487  GKWCTRNRVDKGNALFNEALRNGVPVAPKEYKVDEKY-MKKPKAVKKEKKRETLPEKMAR 545

Query: 567  XXXXXXXXXLSFVKKPKKTMRRAF 496
                     LSFVKKPKK MRR F
Sbjct: 546  KRRRLKQIRLSFVKKPKKMMRRPF 569