BLASTX nr result
ID: Cimicifuga21_contig00007332
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007332
(1846 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi... 762 0.0
ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis... 756 0.0
ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|2... 745 0.0
ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|2... 745 0.0
emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera] 742 0.0
>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative
[Ricinus communis]
Length = 494
Score = 762 bits (1967), Expect = 0.0
Identities = 367/494 (74%), Positives = 419/494 (84%), Gaps = 2/494 (0%)
Frame = -2
Query: 1611 IMVTSPFRRLHHHRSDPKWPIQVILSSHKKTLFTVVWIFGFALVFIWQRNII-DGLSLFX 1435
++ T+ RLH+ R + K + SSHK TLFTV+WI FA VF+WQRN++ DG ++F
Sbjct: 2 MLETASLGRLHYQRLELKRWVPTFFSSHK-TLFTVLWIAAFASVFVWQRNVVGDGFAVFF 60
Query: 1434 XXXXXXXXXXXPXXXXXXXXXXXXXXXT-LNTRAFEKAIAAIATFGKRGGGQLNVQAGYW 1258
LNT AFE+A+ AI+ GK+GGGQLNV G W
Sbjct: 61 KASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRW 120
Query: 1257 LTAPFNLTSHMTLFLAEDAVILGVDDEKLWPLMPPLPSYGSGREHPGPRYGSLIHGQNLT 1078
+TAPFNLTSHMTLFLAED++ILG++DEK WPLMPPLPSYG GREHPGPRYGSLIHGQNL
Sbjct: 121 VTAPFNLTSHMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLK 180
Query: 1077 DVIITGHNGTIDGQGKAWWKKFRQKLLKHTRGPLVQIMRSSNIQISNITLRNSPFWTLHP 898
DV+ITGHNGTI+GQG+ WWKK+RQKLL HTRGPLVQIM SS+I I+NITLR+SPFWTLHP
Sbjct: 181 DVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHP 240
Query: 897 FDCKNVTIIGVTILAPIFEAPNTDGINPDSCENMVIEDCYISVGDDGIAIKSGWDQYGIA 718
+DCKNVTI VTILAP+ EAPNTDGI+PDSCE+MVIEDCYISVGDDGIAIKSGWDQYGIA
Sbjct: 241 YDCKNVTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIA 300
Query: 717 YGRPSKNIFIRNVAIRSMVSAGVSIGSEMSGGVSNVTVENLLVWSSRRGVRIKTSPGRGG 538
Y RPS NI IRN+ +RSMVSAG+SIGSEMSGGVSN+TVENLLVWSSRR VRIKT+PGRGG
Sbjct: 301 YRRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGG 360
Query: 537 YVRHITYRNITFDNVRVGIVIKTDYSEHPDEGYNPKALPVIQHISFTGVYGHGVRVPVRI 358
YVRHITYRN+TFDNVRVGIVIKTDY+EHPDEGY+PKA+PV++ ISFTGV+G GVRVPVRI
Sbjct: 361 YVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRI 420
Query: 357 NGSEEIPIRNVTFQDMSVGITYKKKHIFQCAFVQGRVIGSIFPTPCENLDRYDEQARLIK 178
+GSEEIP+RNVTFQDMSVG+TYKKKHIFQCAFVQGRVIG+IFP PCENLDRYDEQ RL+K
Sbjct: 421 HGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQGRLVK 480
Query: 177 RSVAQNITNIDYDF 136
RSV+QN+T+IDYDF
Sbjct: 481 RSVSQNLTDIDYDF 494
>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product
[Vitis vinifera]
Length = 493
Score = 756 bits (1953), Expect = 0.0
Identities = 368/491 (74%), Positives = 416/491 (84%), Gaps = 2/491 (0%)
Frame = -2
Query: 1602 TSPFRRLH--HHRSDPKWPIQVILSSHKKTLFTVVWIFGFALVFIWQRNIIDGLSLFXXX 1429
T+ F R H HHR D K I LSSH+ TLFT++WI FA VF+WQRNI++GL F
Sbjct: 4 TASFGRFHFNHHRPDLKRWIPAFLSSHR-TLFTILWIAAFASVFVWQRNIVEGLLTFRRA 62
Query: 1428 XXXXXXXXXPXXXXXXXXXXXXXXXTLNTRAFEKAIAAIATFGKRGGGQLNVQAGYWLTA 1249
P T+NT AFE+AI+AI+ GK+GGGQLNV AG WLTA
Sbjct: 63 PARPLPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTA 122
Query: 1248 PFNLTSHMTLFLAEDAVILGVDDEKLWPLMPPLPSYGSGREHPGPRYGSLIHGQNLTDVI 1069
PFNLTSHMTLFL +DAVILG+ DEK WPLMPPLPSYG GREH G RYGSLIHGQNL DV+
Sbjct: 123 PFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVV 182
Query: 1068 ITGHNGTIDGQGKAWWKKFRQKLLKHTRGPLVQIMRSSNIQISNITLRNSPFWTLHPFDC 889
ITGHNGTI+GQG+ WWKK+RQKLL HTRGPLVQIM SS+I ISNITLR+SPFWTLHP+DC
Sbjct: 183 ITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDC 242
Query: 888 KNVTIIGVTILAPIFEAPNTDGINPDSCENMVIEDCYISVGDDGIAIKSGWDQYGIAYGR 709
KNVTI VTILAPIFEAPNTDGI+PDSCE+MVIEDCYISVGDDGIAIKSGWDQYG+AYGR
Sbjct: 243 KNVTIKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGR 302
Query: 708 PSKNIFIRNVAIRSMVSAGVSIGSEMSGGVSNVTVENLLVWSSRRGVRIKTSPGRGGYVR 529
PS NI IRN+ IRSMVSAGVSIGSEMSGGVSNVTVENLLVW+SRR VRIKTSPGRGGYV+
Sbjct: 303 PSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQ 362
Query: 528 HITYRNITFDNVRVGIVIKTDYSEHPDEGYNPKALPVIQHISFTGVYGHGVRVPVRINGS 349
HI YRN+TFDNVRVGIVIKTDY+EHPD+G++PKALP+++ ISFTGV+G GVRVPVRI+GS
Sbjct: 363 HINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGS 422
Query: 348 EEIPIRNVTFQDMSVGITYKKKHIFQCAFVQGRVIGSIFPTPCENLDRYDEQARLIKRSV 169
EEIP++ VTF+DMSVGITYKKKHIFQCA+V+GRVIG++FP PCENLDRYDEQ +LIK S
Sbjct: 423 EEIPVKKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLIKHSK 482
Query: 168 AQNITNIDYDF 136
+QN+T+IDYDF
Sbjct: 483 SQNVTDIDYDF 493
>ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|222866162|gb|EEF03293.1|
predicted protein [Populus trichocarpa]
Length = 495
Score = 745 bits (1924), Expect = 0.0
Identities = 364/492 (73%), Positives = 410/492 (83%), Gaps = 2/492 (0%)
Frame = -2
Query: 1605 VTSPFR-RLHHHRSDPKWPIQVILSSHKKTLFTVVWIFGFALVFIWQRNII-DGLSLFXX 1432
+ SP R ++ R D K + LSSHK LFT++WI FA VF+WQRN + G + F
Sbjct: 5 IASPLASRFNYQRLDLKRCVPAFLSSHK-ILFTLLWIAAFASVFLWQRNAVRGGFAAFWH 63
Query: 1431 XXXXXXXXXXPXXXXXXXXXXXXXXXTLNTRAFEKAIAAIATFGKRGGGQLNVQAGYWLT 1252
P TLNT AFE+A++AI+ +RGGGQLNV G WLT
Sbjct: 64 GPVRPIPKLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLT 123
Query: 1251 APFNLTSHMTLFLAEDAVILGVDDEKLWPLMPPLPSYGSGREHPGPRYGSLIHGQNLTDV 1072
APFNLTSHMTLFLAEDAVILG+ DE WPLMPPLPSYG GREHPGPRYGSLIHGQNL D+
Sbjct: 124 APFNLTSHMTLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDI 183
Query: 1071 IITGHNGTIDGQGKAWWKKFRQKLLKHTRGPLVQIMRSSNIQISNITLRNSPFWTLHPFD 892
+ITGHNGTIDGQG+ WWKK+RQKLL HTRGPLVQIM SS+I NITLRNSPFWTLHP+D
Sbjct: 184 VITGHNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYD 243
Query: 891 CKNVTIIGVTILAPIFEAPNTDGINPDSCENMVIEDCYISVGDDGIAIKSGWDQYGIAYG 712
CKNVTI VTILAPIFEAPNTDGI+PDSCE+MVIEDCYISVGDD IAIKSGWDQYGIAYG
Sbjct: 244 CKNVTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 303
Query: 711 RPSKNIFIRNVAIRSMVSAGVSIGSEMSGGVSNVTVENLLVWSSRRGVRIKTSPGRGGYV 532
RPS NI IRN+ +RSMVSAG+SIGSEMSGGVS+VTVENLLVWSSRR VRIKT+PGRG YV
Sbjct: 304 RPSTNILIRNLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYV 363
Query: 531 RHITYRNITFDNVRVGIVIKTDYSEHPDEGYNPKALPVIQHISFTGVYGHGVRVPVRING 352
R+ITYRN+TFD+VRVGIVIKTDY+EHPDEGY+PKA+P +Q ISF+G++G GVRVPVRI+G
Sbjct: 364 RNITYRNLTFDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHG 423
Query: 351 SEEIPIRNVTFQDMSVGITYKKKHIFQCAFVQGRVIGSIFPTPCENLDRYDEQARLIKRS 172
SEEIP+RNVTFQDMSVG+TYKKKHIFQCAFVQGRVIG+IFP PCENLDRYDEQ +L+K S
Sbjct: 424 SEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQGKLVKLS 483
Query: 171 VAQNITNIDYDF 136
V+QNIT+IDYDF
Sbjct: 484 VSQNITDIDYDF 495
>ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|222833326|gb|EEE71803.1|
predicted protein [Populus trichocarpa]
Length = 495
Score = 745 bits (1924), Expect = 0.0
Identities = 361/488 (73%), Positives = 411/488 (84%), Gaps = 1/488 (0%)
Frame = -2
Query: 1596 PFRRLHHHRSDPKWPIQVILSSHKKTLFTVVWIFGFALVFIWQRNIID-GLSLFXXXXXX 1420
P R ++ R + K + LSSHK TLF ++WI FA VF+W+RN + GL++F
Sbjct: 9 PSSRFNYKRLELKRCLPAFLSSHK-TLFALLWIAAFASVFLWKRNPVGAGLAVFWRGPLR 67
Query: 1419 XXXXXXPXXXXXXXXXXXXXXXTLNTRAFEKAIAAIATFGKRGGGQLNVQAGYWLTAPFN 1240
P T+NT AFE+A++AI+ KRGGGQLNV G WLTAPFN
Sbjct: 68 PMPQLRPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFN 127
Query: 1239 LTSHMTLFLAEDAVILGVDDEKLWPLMPPLPSYGSGREHPGPRYGSLIHGQNLTDVIITG 1060
LTSHMTLFLAE AVILG+ DEK WPLMP LPSYG GREHPGPRYGSLIHGQNL DV+ITG
Sbjct: 128 LTSHMTLFLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITG 187
Query: 1059 HNGTIDGQGKAWWKKFRQKLLKHTRGPLVQIMRSSNIQISNITLRNSPFWTLHPFDCKNV 880
HNGTIDGQG+ WWKK+RQKLL HTRGPLVQIM SS+I +NITLR+SPFWTLHP+DCKNV
Sbjct: 188 HNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNV 247
Query: 879 TIIGVTILAPIFEAPNTDGINPDSCENMVIEDCYISVGDDGIAIKSGWDQYGIAYGRPSK 700
TI VTILAPIFEAPNTDGI+PDSCE+MVIEDCYISVGDD IAIKSGWDQYGIAYGRPS
Sbjct: 248 TIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPST 307
Query: 699 NIFIRNVAIRSMVSAGVSIGSEMSGGVSNVTVENLLVWSSRRGVRIKTSPGRGGYVRHIT 520
NI IRN+ +RSMVSAG+SIGSEMSGGVSNVTVEN+LVWSSRR VRIKT+PGRGGYVRHIT
Sbjct: 308 NILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHIT 367
Query: 519 YRNITFDNVRVGIVIKTDYSEHPDEGYNPKALPVIQHISFTGVYGHGVRVPVRINGSEEI 340
YRN+TFDNVRVGIVIKTDY+EHPDEGY+PKA+P++ ISFTG++G GVRVPVRI+GS+EI
Sbjct: 368 YRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEI 427
Query: 339 PIRNVTFQDMSVGITYKKKHIFQCAFVQGRVIGSIFPTPCENLDRYDEQARLIKRSVAQN 160
P+RNVTF DMSVG+TYKKKHIFQCAFVQGRVIG++FP PCENLDRYDEQ +L+KRSV+QN
Sbjct: 428 PVRNVTFWDMSVGLTYKKKHIFQCAFVQGRVIGTVFPAPCENLDRYDEQGKLVKRSVSQN 487
Query: 159 ITNIDYDF 136
+T+IDYDF
Sbjct: 488 LTDIDYDF 495
>emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 742 bits (1916), Expect = 0.0
Identities = 366/507 (72%), Positives = 416/507 (82%), Gaps = 18/507 (3%)
Frame = -2
Query: 1602 TSPFRRLH--HHRSDPKWPIQVILSSHKKTLFTVVWIFGFALVFIWQRNIIDGLSLFXXX 1429
T+ F R H HHR D K I LSSH+ TLFT++WI FA VF+WQRNI++GL F
Sbjct: 4 TASFGRFHFNHHRPDLKRWIPAFLSSHR-TLFTILWIAAFASVFVWQRNIVEGLLTFRRA 62
Query: 1428 XXXXXXXXXPXXXXXXXXXXXXXXXTLNTRAFEKAIAAIATFGKRGGGQLNVQAGYWLTA 1249
P T+NT AFE+AI+AI+ GK+GGGQLNV AG WLTA
Sbjct: 63 PARPLPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTA 122
Query: 1248 PFNLTSHMTLFLAEDAVILGVDDEKLWPLMPPLPSYGSGREHPGPRYGSLIHGQNLTDVI 1069
PFNLTSHMTLFL +DAVILG+ DEK WPLMPPLPSYG GREH G RYGSLIHGQNL DV+
Sbjct: 123 PFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVV 182
Query: 1068 ITGHNGTIDGQGKAWWKKFRQKLLKHTRGPLVQIMRSSNIQISNITLRNSPFWTLHPFDC 889
+TGHNGTI+GQG+ WWKK+RQKLL HTRGPLVQIM SS+I ISNITLR+SPFWTLHP+DC
Sbjct: 183 VTGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDC 242
Query: 888 KNVTIIGVTILAPIFEAPNTDGINP----------------DSCENMVIEDCYISVGDDG 757
KNVTI VTILAPIFEAPNTDGI+P +SCE+MVIEDCYISVGDDG
Sbjct: 243 KNVTIKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDG 302
Query: 756 IAIKSGWDQYGIAYGRPSKNIFIRNVAIRSMVSAGVSIGSEMSGGVSNVTVENLLVWSSR 577
IAIKSGWDQYG+AYGRPS NI IRN+ IRSMVSAGVSIGSEMSGGVSNVTVENLLVW+SR
Sbjct: 303 IAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSR 362
Query: 576 RGVRIKTSPGRGGYVRHITYRNITFDNVRVGIVIKTDYSEHPDEGYNPKALPVIQHISFT 397
R VRIKTSPGRGGYV+HI YRN+TFDNVRVGIVIKTDY+EHPD+G++PKALP+++ ISFT
Sbjct: 363 RAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFT 422
Query: 396 GVYGHGVRVPVRINGSEEIPIRNVTFQDMSVGITYKKKHIFQCAFVQGRVIGSIFPTPCE 217
GV+G GVRVPVRI+GSEEIP++ VTF+DMSVGITYKKKHIFQCA+V+GRVIG++FP PCE
Sbjct: 423 GVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCE 482
Query: 216 NLDRYDEQARLIKRSVAQNITNIDYDF 136
NLDRYDEQ +L K S +QN+T+IDYDF
Sbjct: 483 NLDRYDEQEQLXKHSXSQNVTDIDYDF 509