BLASTX nr result

ID: Cimicifuga21_contig00007295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007295
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531072.1| conserved hypothetical protein [Ricinus comm...   254   3e-65
ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251...   253   3e-65
ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|2...   253   3e-65
ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209...   243   5e-62
ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arab...   240   4e-61

>ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis]
           gi|223529318|gb|EEF31286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  254 bits (648), Expect = 3e-65
 Identities = 141/278 (50%), Positives = 185/278 (66%), Gaps = 23/278 (8%)
 Frame = +3

Query: 12  SSGSMESLLRRRIAKMKENECQIAVEDIMYMSIVHKFSKVDVPMVPKLSKCITDNKLEIW 191
           SS S E+ L RRIA++KE+ECQIAVED+MYM I  KFS++ VP+VPKLS+CI + +LEI 
Sbjct: 132 SSRSDEASLHRRIAQLKEHECQIAVEDVMYMLIFSKFSEIRVPLVPKLSRCIYNGRLEIG 191

Query: 192 PPKCKELESIHSLEVQEMIRYHLATILRMRGKSSTVDGQTTTKIDMFHLGRIYASSIMYG 371
           P K  ELESIHS EV EMI+ H+ T++ +R  SS  D   TT+I    LGR+YA+S++YG
Sbjct: 192 PSKDWELESIHSFEVLEMIKEHVCTVIGLRANSSVTDSWATTEIQRLQLGRVYAASVLYG 251

Query: 372 YFLKSACLRRRLD-----------LSC------------GFKSLVTLGQSTEALVSSTSQ 482
           YFLKSA LR  L+           LSC            G  ++V   + +     S  Q
Sbjct: 252 YFLKSASLRHYLEQCIAVSHHNVHLSCRTVRQYPESISHGLTNIV-FRRISNMQSGSAGQ 310

Query: 483 DSQRCDRRHENLGSYVTGFDSESLQRCAKLKSKEAVNVIEKQTWALFGGENIGALDSDND 662
            S + D +   L  YV GFD+E+LQRCAKLKSKEA+N+IEK + ALFG +N G+L++D  
Sbjct: 311 GSIKQDWQRGKLRCYVMGFDAETLQRCAKLKSKEAMNLIEKHSSALFGNDNTGSLENDEV 370

Query: 663 IVITFPTLKRLVLEAVTFGSFLWDVERSVDALYVLKEN 776
           I+ +F +LKRLVLEAV FGSFLWD E  V++++ L EN
Sbjct: 371 ILTSFSSLKRLVLEAVAFGSFLWDTEEYVNSIFKLSEN 408


>ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis
           vinifera]
          Length = 380

 Score =  253 bits (647), Expect = 3e-65
 Identities = 139/274 (50%), Positives = 183/274 (66%), Gaps = 19/274 (6%)
 Frame = +3

Query: 12  SSGSMESLLRRRIAKMKENECQIAVEDIMYMSIVHKFSKVDVPMVPKLSKCITDNKLEIW 191
           SS S ES L RRIA++KE ECQIAVED+MY+ I +KFS++ V +VP+LS+CI + +LEIW
Sbjct: 108 SSSSSESCLHRRIAELKERECQIAVEDVMYLLIFYKFSEIRVHLVPRLSRCIYNGRLEIW 167

Query: 192 PPKCKELESIHSLEVQEMIRYHLATILRMRGKSSTVDGQTTTKIDMFHLGRIYASSIMYG 371
           P +   LE IH+ EV EMI+ HL T+L  + KS+  +   TT+I  F LG+IYA+SI+YG
Sbjct: 168 PARDWALECIHNFEVLEMIKEHLTTVLGWKPKSNVTENWATTQIRRFQLGQIYAASILYG 227

Query: 372 YFLKSACLRRRLDLSC------------------GFKSLVTLGQSTEALVSSTSQDSQRC 497
           YFLKSA LR  L++S                   G K L  LG +  +  +S  + S R 
Sbjct: 228 YFLKSASLRHHLEMSLVHSHHDLPSSNVSGFWSYGLKDLF-LGPNCSSQPTSLGEASSRQ 286

Query: 498 DRRHE-NLGSYVTGFDSESLQRCAKLKSKEAVNVIEKQTWALFGGENIGALDSDNDIVIT 674
           + + E  L  YV GFD ++LQRCAKLKSKEAVN++EK + ALFG E  G L++D+ I  +
Sbjct: 287 EEKEEKKLRCYVMGFDPDTLQRCAKLKSKEAVNLVEKHSCALFGDEKTGLLETDDVISTS 346

Query: 675 FPTLKRLVLEAVTFGSFLWDVERSVDALYVLKEN 776
           F ++KRLVLEAV FGSFLWD E  V ++Y LKEN
Sbjct: 347 FSSMKRLVLEAVAFGSFLWDTEEYVGSVYNLKEN 380


>ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  253 bits (647), Expect = 3e-65
 Identities = 135/268 (50%), Positives = 182/268 (67%), Gaps = 23/268 (8%)
 Frame = +3

Query: 42  RRIAKMKENECQIAVEDIMYMSIVHKFSKVDVPMVPKLSKCITDNKLEIWPPKCKELESI 221
           +RIA++KE+ECQ+AVED+MYM +++KFS++ VP+VPKLS+CI + +LEI P K  ELESI
Sbjct: 8   QRIAELKEHECQVAVEDVMYMLVLYKFSEIRVPLVPKLSRCIYNGRLEIRPSKDWELESI 67

Query: 222 HSLEVQEMIRYHLATILRMRGKSSTVDGQTTTKIDMFHLGRIYASSIMYGYFLKSACLRR 401
           HS EV EM+R H++T++ ++  SS  D   TT++    LGR+YA+SI+YGYFLKSA LR 
Sbjct: 68  HSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRLGRVYAASILYGYFLKSASLRH 127

Query: 402 RL---------DLSCGFKSLVTLGQSTEAL------------VSSTSQDSQ--RCDRRHE 512
            L         D+  G +S +   +S  +               STSQ ++  R    HE
Sbjct: 128 HLEWCLVLPHQDIHLGHRSTLQFPESLPSYGLTNLVFGHISNKQSTSQGTRLNRPKSEHE 187

Query: 513 NLGSYVTGFDSESLQRCAKLKSKEAVNVIEKQTWALFGGENIGALDSDNDIVITFPTLKR 692
            L  Y+ GFDSE+LQRCAKLKSKEAVN+IEK + ALFG E  G L++D  I+ +F +LKR
Sbjct: 188 KLKCYMMGFDSETLQRCAKLKSKEAVNLIEKHSCALFGDEKTGVLENDEVILTSFSSLKR 247

Query: 693 LVLEAVTFGSFLWDVERSVDALYVLKEN 776
           LVLEAV FG FLWD E  V+++Y LK+N
Sbjct: 248 LVLEAVAFGCFLWDTEEDVNSVYKLKDN 275


>ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus]
          Length = 388

 Score =  243 bits (620), Expect = 5e-62
 Identities = 133/279 (47%), Positives = 178/279 (63%), Gaps = 24/279 (8%)
 Frame = +3

Query: 12  SSGSMESLLRRRIAKMKENECQIAVEDIMYMSIVHKFSKVDVPMVPKLSKCITDNKLEIW 191
           S+ S E+LL RRIA++KE+ECQIAV+D+MYM I ++FS++ V +VPKLS+C+ + +LEI 
Sbjct: 110 SAHSDEALLHRRIAQLKEHECQIAVQDVMYMLIFYRFSEIRVNLVPKLSRCVYNGRLEIL 169

Query: 192 PPKCKELESIHSLEVQEMIRYHLATILRMRGKSSTVDGQTTTKIDMFHLGRIYASSIMYG 371
           P K  ELESI+ LEV  MI+ H+ T++ +R  SS  D    T I   HLGR+Y +SI+YG
Sbjct: 170 PCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLGRVYVASILYG 229

Query: 372 YFLKSACLRRRLDLSC------------------------GFKSLVTLGQSTEALVSSTS 479
           YFLKSA LR  L+                           GF++L++   S    V    
Sbjct: 230 YFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGRLSNMLSVPHNQ 289

Query: 480 QDSQRCDRRHENLGSYVTGFDSESLQRCAKLKSKEAVNVIEKQTWALFGGENIGALDSDN 659
             S   +   E L  ++TGFDSE+LQRCAKLKSKEA+N+IE  ++AL G E +G  +++ 
Sbjct: 290 VLSSSQETEPEKLKRFLTGFDSEALQRCAKLKSKEALNLIENHSYALLGNEEVGFFENNE 349

Query: 660 DIVITFPTLKRLVLEAVTFGSFLWDVERSVDALYVLKEN 776
            IV +F +LKRLVLEAV FGSFLWD E  VD +Y LKEN
Sbjct: 350 VIVTSFSSLKRLVLEAVAFGSFLWDAEEYVDTIYKLKEN 388


>ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp.
           lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein
           ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score =  240 bits (612), Expect = 4e-61
 Identities = 133/261 (50%), Positives = 177/261 (67%), Gaps = 6/261 (2%)
 Frame = +3

Query: 12  SSGSMESLLRRRIAKMKENECQIAVEDIMYMSIVHKFSKVDVPMVPKLSKCITDNKLEIW 191
           SSGS E+ L RRIA++KE  C+ AV+DIMYM I +K+S++ VP+VPKLS+CI + +LEIW
Sbjct: 111 SSGSDEASLHRRIAQLKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIW 170

Query: 192 PPKCKELESIHSLEVQEMIRYHLATILRMRGKSSTVDGQTTTKIDMFHLGRIYASSIMYG 371
           P K  ELESIHS +  E+I+ H++ ++ +R  S   D   TT+I   HL ++YA+SI+YG
Sbjct: 171 PSKDWELESIHSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYG 230

Query: 372 YFLKSACLRRRLDLS------CGFKSLVTLGQSTEALVSSTSQDSQRCDRRHENLGSYVT 533
           YFLKSA LR +L+ S       G+     LG S     +ST+Q S +   RH     Y++
Sbjct: 231 YFLKSASLRHQLECSLSDLHGSGYLKSPILGCS---FTTSTAQISSKQQLRH-----YIS 282

Query: 534 GFDSESLQRCAKLKSKEAVNVIEKQTWALFGGENIGALDSDNDIVITFPTLKRLVLEAVT 713
           GFD E+LQRCAK +++EA N+IEKQ+ ALFG E     +SD  IV +F +LKRLVLEAV 
Sbjct: 283 GFDPETLQRCAKPRTEEARNLIEKQSLALFGTE-----ESDETIVTSFSSLKRLVLEAVA 337

Query: 714 FGSFLWDVERSVDALYVLKEN 776
           FG+FLWD E  VD  Y LKEN
Sbjct: 338 FGTFLWDTELYVDGAYKLKEN 358


Top