BLASTX nr result

ID: Cimicifuga21_contig00007294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007294
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arab...    69   4e-10
ref|XP_002531072.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251...    66   3e-09
ref|NP_566302.1| uncharacterized protein [Arabidopsis thaliana] ...    64   2e-08

>ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 23/112 (20%)
 Frame = -3

Query: 268 DGQTTTKIDRLHLGRIYASSIMYGYFLKSACLRRRL---------DLSCGFKSLVTLDQS 116
           D   TT++ R  LGR+YA+SI+YGYFLKSA LR  L         D+  G +S +   +S
Sbjct: 94  DSWATTEVQRCRLGRVYAASILYGYFLKSASLRHHLEWCLVLPHQDIHLGHRSTLQFPES 153

Query: 115 TEAL---------VSSASQDSQ-----RCDRRHENLSSYVSGFDSESLQRCA 2
             +          +S+    SQ     R    HE L  Y+ GFDSE+LQRCA
Sbjct: 154 LPSYGLTNLVFGHISNKQSTSQGTRLNRPKSEHEKLKCYMMGFDSETLQRCA 205


>ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp.
           lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein
           ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/89 (41%), Positives = 51/89 (57%)
 Frame = -3

Query: 268 DGQTTTKIDRLHLGRIYASSIMYGYFLKSACLRRRLDLSCGFKSLVTLDQSTEALVSSAS 89
           D   TT+I +LHL ++YA+SI+YGYFLKSA LR +L+  C    L         ++  + 
Sbjct: 207 DNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLE--CSLSDLHGSGYLKSPILGCSF 264

Query: 88  QDSQRCDRRHENLSSYVSGFDSESLQRCA 2
             S       + L  Y+SGFD E+LQRCA
Sbjct: 265 TTSTAQISSKQQLRHYISGFDPETLQRCA 293


>ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis]
           gi|223529318|gb|EEF31286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 23/112 (20%)
 Frame = -3

Query: 268 DGQTTTKIDRLHLGRIYASSIMYGYFLKSACLRRRLD-----------LSC--------- 149
           D   TT+I RL LGR+YA+S++YGYFLKSA LR  L+           LSC         
Sbjct: 228 DSWATTEIQRLQLGRVYAASVLYGYFLKSASLRHYLEQCIAVSHHNVHLSCRTVRQYPES 287

Query: 148 ---GFKSLVTLDQSTEALVSSASQDSQRCDRRHENLSSYVSGFDSESLQRCA 2
              G  ++V   + +     SA Q S + D +   L  YV GFD+E+LQRCA
Sbjct: 288 ISHGLTNIV-FRRISNMQSGSAGQGSIKQDWQRGKLRCYVMGFDAETLQRCA 338


>ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis
           vinifera]
          Length = 380

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
 Frame = -3

Query: 256 TTKIDRLHLGRIYASSIMYGYFLKSACLRRRLDLSC------------------GFKSLV 131
           TT+I R  LG+IYA+SI+YGYFLKSA LR  L++S                   G K L 
Sbjct: 208 TTQIRRFQLGQIYAASILYGYFLKSASLRHHLEMSLVHSHHDLPSSNVSGFWSYGLKDLF 267

Query: 130 TLDQSTEALVSSASQDSQRCDRRHENLSSYVSGFDSESLQRCA 2
                +    S     S++ ++  + L  YV GFD ++LQRCA
Sbjct: 268 LGPNCSSQPTSLGEASSRQEEKEEKKLRCYVMGFDPDTLQRCA 310


>ref|NP_566302.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6041833|gb|AAF02142.1|AC009853_2 unknown protein
           [Arabidopsis thaliana]
           gi|6642634|gb|AAF20215.1|AC012395_2 unknown protein
           [Arabidopsis thaliana] gi|14596187|gb|AAK68821.1|
           Unknown protein [Arabidopsis thaliana]
           gi|21593217|gb|AAM65166.1| unknown [Arabidopsis
           thaliana] gi|22136074|gb|AAM91115.1| unknown protein
           [Arabidopsis thaliana] gi|332641006|gb|AEE74527.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 368

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = -3

Query: 268 DGQTTTKIDRLHLGRIYASSIMYGYFLKSACLRRRLDLSCGFKSLVTLDQSTEALVSSAS 89
           D   TT+I +LHL ++YA+SI+YGYFLKSA LR +L+  C    +         +   + 
Sbjct: 205 DNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLE--CSLSDIHGSGYLKSPIFGCSF 262

Query: 88  QDSQRCDRRHENLSSYVSGFDSESLQRCA 2
                     + L  Y+S FD E+LQRCA
Sbjct: 263 TTGTAQISNKQQLRHYISDFDPETLQRCA 291


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