BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007291
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20115.3| unnamed protein product [Vitis vinifera]              330   3e-88
ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloro...   330   3e-88
ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana...   330   3e-88
ref|XP_004146016.1| PREDICTED: 50S ribosomal protein L13, chloro...   330   4e-88
ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata] g...   330   4e-88

>emb|CBI20115.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  330 bits (847), Expect = 3e-88
 Identities = 160/203 (78%), Positives = 177/203 (87%), Gaps = 1/203 (0%)
 Frame = -2

Query: 877 TLFPGFTLKPSIPSLGALSLSQKPLQIRATD-LAIVPQEQRWMFEDDEISGPDIWNKTWY 701
           T F GF++  + P     S  ++  ++   D  A+VP +QRWMFE  E+SGPDIWNKTWY
Sbjct: 169 TPFLGFSISAANPKP---SFPRQSFRVNCQDKAAVVPLDQRWMFEQSEVSGPDIWNKTWY 225

Query: 700 PKASDHVNTDKTWYIVDATDKILGRLASTIAIYIRGKNLATFTPSVDMGAFVIVVNAEKV 521
           PKA+DH+NT+KTWYIVDATDKILGRLASTIAIYIRGKNLAT+TPSVDMG+FVIVVNAEKV
Sbjct: 226 PKAADHINTEKTWYIVDATDKILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKV 285

Query: 520 AVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHL 341
           AVSGKKR QKLYRRHSGRPGGM VETFDQLQQRIPERI+EHAVRGMLPKGRLGRALFNHL
Sbjct: 286 AVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHL 345

Query: 340 KVYKGPDHPHEAQMPVDLPIRDK 272
           KVYKGP HPHEAQ P+DLPIRDK
Sbjct: 346 KVYKGPHHPHEAQKPIDLPIRDK 368


>ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Vitis
           vinifera]
          Length = 235

 Score =  330 bits (847), Expect = 3e-88
 Identities = 160/203 (78%), Positives = 177/203 (87%), Gaps = 1/203 (0%)
 Frame = -2

Query: 877 TLFPGFTLKPSIPSLGALSLSQKPLQIRATD-LAIVPQEQRWMFEDDEISGPDIWNKTWY 701
           T F GF++  + P     S  ++  ++   D  A+VP +QRWMFE  E+SGPDIWNKTWY
Sbjct: 30  TPFLGFSISAANPKP---SFPRQSFRVNCQDKAAVVPLDQRWMFEQSEVSGPDIWNKTWY 86

Query: 700 PKASDHVNTDKTWYIVDATDKILGRLASTIAIYIRGKNLATFTPSVDMGAFVIVVNAEKV 521
           PKA+DH+NT+KTWYIVDATDKILGRLASTIAIYIRGKNLAT+TPSVDMG+FVIVVNAEKV
Sbjct: 87  PKAADHINTEKTWYIVDATDKILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKV 146

Query: 520 AVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHL 341
           AVSGKKR QKLYRRHSGRPGGM VETFDQLQQRIPERI+EHAVRGMLPKGRLGRALFNHL
Sbjct: 147 AVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHL 206

Query: 340 KVYKGPDHPHEAQMPVDLPIRDK 272
           KVYKGP HPHEAQ P+DLPIRDK
Sbjct: 207 KVYKGPHHPHEAQKPIDLPIRDK 229


>ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana]
           gi|75314103|sp|Q9SYL9.1|RK13_ARATH RecName: Full=50S
           ribosomal protein L13, chloroplastic; AltName:
           Full=CL13; AltName: Full=Protein EMBRYO DEFECTIVE 1473;
           Flags: Precursor gi|4836870|gb|AAD30573.1|AC007260_4 50S
           Ribosomal protein L13 [Arabidopsis thaliana]
           gi|13878111|gb|AAK44133.1|AF370318_1 putative ribosomal
           protein L13 [Arabidopsis thaliana]
           gi|7572938|emb|CAA60775.1| ribosomal protein L13
           [Arabidopsis thaliana] gi|17104781|gb|AAL34279.1|
           putative ribosomal protein L13 [Arabidopsis thaliana]
           gi|332198009|gb|AEE36130.1| 50S ribosomal protein L13
           [Arabidopsis thaliana]
          Length = 241

 Score =  330 bits (847), Expect = 3e-88
 Identities = 163/212 (76%), Positives = 185/212 (87%), Gaps = 9/212 (4%)
 Frame = -2

Query: 880 KTLFPGFTL----KPSIPSLGALSLSQKPLQIRA-----TDLAIVPQEQRWMFEDDEISG 728
           K+ F GF+L    KPS+  +G  + S++ LQ++      T  ++VP  QRWMF+++E +G
Sbjct: 25  KSPFLGFSLTAISKPSV-RVGIYANSKRGLQVKCEAEPTTTTSLVPANQRWMFDEEEANG 83

Query: 727 PDIWNKTWYPKASDHVNTDKTWYIVDATDKILGRLASTIAIYIRGKNLATFTPSVDMGAF 548
           PDIWN TWYPKASDHVNTDK W++VDATDKILGRLASTIA +IRGKNLA++TPSVDMGAF
Sbjct: 84  PDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAF 143

Query: 547 VIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGR 368
           VIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 144 VIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGR 203

Query: 367 LGRALFNHLKVYKGPDHPHEAQMPVDLPIRDK 272
           LGRALFNHLKVYKGPDHPHEAQ P+DLPIRDK
Sbjct: 204 LGRALFNHLKVYKGPDHPHEAQKPLDLPIRDK 235


>ref|XP_004146016.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Cucumis
           sativus] gi|449518653|ref|XP_004166351.1| PREDICTED: 50S
           ribosomal protein L13, chloroplastic-like [Cucumis
           sativus]
          Length = 248

 Score =  330 bits (846), Expect = 4e-88
 Identities = 157/178 (88%), Positives = 167/178 (93%)
 Frame = -2

Query: 805 LQIRATDLAIVPQEQRWMFEDDEISGPDIWNKTWYPKASDHVNTDKTWYIVDATDKILGR 626
           LQ+RA +L  VP EQRWMFE DE+ GPDIWNKTWYPKA+DHVNT+K WY+VDATDKILGR
Sbjct: 65  LQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEKPWYVVDATDKILGR 124

Query: 625 LASTIAIYIRGKNLATFTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVE 446
           LASTIA +IRGK+L T+TPSVDMGAFVIVVNAEK+AVSGKKR QKLYRRHSGRPGGMTVE
Sbjct: 125 LASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVE 184

Query: 445 TFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQMPVDLPIRDK 272
           TFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQ PVDLPIRDK
Sbjct: 185 TFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDK 242


>ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata]
           gi|297333589|gb|EFH64007.1| EMB1473 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  330 bits (846), Expect = 4e-88
 Identities = 163/213 (76%), Positives = 185/213 (86%), Gaps = 10/213 (4%)
 Frame = -2

Query: 880 KTLFPGFTL----KPSIPSLGALSLSQKPLQIRA------TDLAIVPQEQRWMFEDDEIS 731
           K+ F GF+L    KPS+  +G  + S++ LQ++       T  ++VP  QRWMF+++E +
Sbjct: 25  KSPFLGFSLTAFSKPSV-RVGIYANSKRGLQVKCEAEETTTKTSLVPANQRWMFDEEEAN 83

Query: 730 GPDIWNKTWYPKASDHVNTDKTWYIVDATDKILGRLASTIAIYIRGKNLATFTPSVDMGA 551
           GPDIWN TWYPKASDHVNTDK W++VDATDKILGRLASTIA +IRGKNLA++TPSVDMGA
Sbjct: 84  GPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGA 143

Query: 550 FVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKG 371
           FVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERI+EHAVRGMLPKG
Sbjct: 144 FVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKG 203

Query: 370 RLGRALFNHLKVYKGPDHPHEAQMPVDLPIRDK 272
           RLGRALFNHLKVYKGPDHPHEAQ P+DLPIRDK
Sbjct: 204 RLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDK 236