BLASTX nr result

ID: Cimicifuga21_contig00007256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007256
         (1943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   776   0.0  
ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   715   0.0  
ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   695   0.0  
ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicag...   690   0.0  
ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   663   0.0  

>ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
            gi|296083755|emb|CBI23744.3| unnamed protein product
            [Vitis vinifera]
          Length = 788

 Score =  776 bits (2004), Expect = 0.0
 Identities = 402/547 (73%), Positives = 461/547 (84%), Gaps = 2/547 (0%)
 Frame = -3

Query: 1926 LRALIITPTRELALQVADHLKEASKLTNIRVVPIVGGMSTEKQERLLRYRPDIVVGTPGR 1747
            LRALIITPTRELALQV DHLKE +K TN+RVVPIVGGMSTEKQERLL+ RP+IVVGTPGR
Sbjct: 243  LRALIITPTRELALQVTDHLKEVAKGTNVRVVPIVGGMSTEKQERLLKARPEIVVGTPGR 302

Query: 1746 LWELMSGGDEHLAELNSVSFFVLDEADRMIENGHFQELQSIIDMLPMFGGSVEGNSEMTQ 1567
            LWELMS G++HL EL+S+SFFVLDEADRM+ENGHF ELQSIID+LP   GS+E  S+ T+
Sbjct: 303  LWELMSRGEDHLVELHSLSFFVLDEADRMVENGHFHELQSIIDILPKTSGSMESLSQNTE 362

Query: 1566 NSVAVTSLQRKKRQTFVFSATIALSADFRXXXXXXXXXXXXSMDDGRMSSLESLSARAGM 1387
            N   V+++QRKKRQTFVFSATIALSADFR             M+DG ++S+E+LS RAGM
Sbjct: 363  NCFTVSNIQRKKRQTFVFSATIALSADFRKKLKRGALRSKQLMNDG-LNSIETLSERAGM 421

Query: 1386 RADAAIIDLTNASIMAHKLEESFIECREEDKDGYLYYLLSVHGRGRTIVFCTSIAALRHI 1207
            R +AAI+DLTNASIMA+KLEESFIECREEDKD YLYY+LSVHG+GRTIVFCTSIAALRH 
Sbjct: 422  RPNAAIVDLTNASIMANKLEESFIECREEDKDAYLYYILSVHGQGRTIVFCTSIAALRHT 481

Query: 1206 SSILRILGINIWTLHAQMQQRARLKAIDRFRGNEHAVLIATDVAARGLDIPGVRTVIHYQ 1027
            SS+LRILGIN+WTLHAQMQQRARLKAIDRFRGNEH +L+ATDVAARGLDIPGVRTV+HYQ
Sbjct: 482  SSLLRILGINVWTLHAQMQQRARLKAIDRFRGNEHGILVATDVAARGLDIPGVRTVVHYQ 541

Query: 1026 LPHSAEVYVHRSGRTARASSDGCCIALISPNDKSKFTSLCKSFSKESLQRFPLDNSLMPE 847
            LPHSAEVYVHRSGRTARAS+DGC IALISPND+SKF +LCKSFSKES QRFP+++S MPE
Sbjct: 542  LPHSAEVYVHRSGRTARASADGCSIALISPNDRSKFANLCKSFSKESFQRFPIESSYMPE 601

Query: 846  VVKRLSLARQIDKVLRKDSQEKAQKSWFERNAEAMELDVDDNDSEEDKVNXXXXXXXXXX 667
            VVKRLSLARQIDK+ RKDSQEKA+KSWFE+NAEA+EL VD++DSEE+KV           
Sbjct: 602  VVKRLSLARQIDKISRKDSQEKAKKSWFEQNAEALELIVDESDSEEEKVKIHKQKKASSM 661

Query: 666  XXXXXXQALNSLLSCPLRPKMFSHRFLAGSGVSPTLQHQFEELARERVGDNNS-KESKRS 490
                  Q LN LLS PL+PK FSHRFLAG+GVSP LQ QFEEL+++++ D  S  ESKR 
Sbjct: 662  HLNKLQQELNMLLSHPLQPKTFSHRFLAGAGVSPLLQRQFEELSKQKLDDGRSLGESKRR 721

Query: 489  KLVVIGQNCVEPLEALRSAGDEVRFDVKVTGD-RRSIVDLKRKRKAEKKNLRDKRRDARK 313
            KL+VIGQ CVEPL+ALRSAG EV  DVK T + RRS+  L+RKRK EKK LRD+RR  RK
Sbjct: 722  KLLVIGQECVEPLQALRSAGQEVCMDVKETAEKRRSLESLRRKRKEEKKQLRDQRRKQRK 781

Query: 312  ELRRNNE 292
             L+ + E
Sbjct: 782  RLKADVE 788


>ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine max]
          Length = 810

 Score =  715 bits (1846), Expect = 0.0
 Identities = 367/547 (67%), Positives = 446/547 (81%), Gaps = 2/547 (0%)
 Frame = -3

Query: 1926 LRALIITPTRELALQVADHLKEASKLTNIRVVPIVGGMSTEKQERLLRYRPDIVVGTPGR 1747
            LRALII PTRELALQV DHLK  +K  N+RV PIVGG+  EKQERLL+ +P+IVVGTPGR
Sbjct: 265  LRALIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGILAEKQERLLKAKPEIVVGTPGR 324

Query: 1746 LWELMSGGDEHLAELNSVSFFVLDEADRMIENGHFQELQSIIDMLPMFGGSVEGNSEMTQ 1567
            LWELMS G++HL EL+S+SFFVLDEADRM++NGHF+ELQSIIDMLPM   S E NS+  Q
Sbjct: 325  LWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNNSAEDNSQHVQ 384

Query: 1566 NSVAVTSLQRKKRQTFVFSATIALSADFRXXXXXXXXXXXXSMDDGRMSSLESLSARAGM 1387
            + V V+S QRKKRQT VFSAT+ALS+DFR            S+ DG ++S+E+LS RAGM
Sbjct: 385  SCVTVSSYQRKKRQTLVFSATVALSSDFRKKLKRGSIKQKQSLTDG-LNSIETLSERAGM 443

Query: 1386 RADAAIIDLTNASIMAHKLEESFIECREEDKDGYLYYLLSVHGRGRTIVFCTSIAALRHI 1207
            R++AAIIDLTN SI+A KLEESFIECREEDKD YLYY+L+VHG+GRTIVFCTSIAALRHI
Sbjct: 444  RSNAAIIDLTNPSILATKLEESFIECREEDKDAYLYYILTVHGQGRTIVFCTSIAALRHI 503

Query: 1206 SSILRILGINIWTLHAQMQQRARLKAIDRFRGNEHAVLIATDVAARGLDIPGVRTVIHYQ 1027
            SSILRILGIN+WTLHAQMQQRARLKA+DRFR NE+ +L+ATDVAARGLDIPGVRTV+HYQ
Sbjct: 504  SSILRILGINVWTLHAQMQQRARLKAMDRFRENENGILVATDVAARGLDIPGVRTVVHYQ 563

Query: 1026 LPHSAEVYVHRSGRTARASSDGCCIALISPNDKSKFTSLCKSFSKESLQRFPLDNSLMPE 847
            LPHSAEVYVHRSGRTARAS++GC IALIS  D SKF SLCKSFSK++ QRFPL+NS MPE
Sbjct: 564  LPHSAEVYVHRSGRTARASAEGCSIALISSRDTSKFASLCKSFSKDNFQRFPLENSYMPE 623

Query: 846  VVKRLSLARQIDKVLRKDSQEKAQKSWFERNAEAMELDVDDNDSEEDKVNXXXXXXXXXX 667
            V+KRLSLARQIDK+ RKDSQEKA+K+WF+RN+ ++EL  +  DSEE++VN          
Sbjct: 624  VLKRLSLARQIDKITRKDSQEKAEKNWFDRNSSSVELVTESYDSEEEQVNKHKQMKASSR 683

Query: 666  XXXXXXQALNSLLSCPLRPKMFSHRFLAGSGVSPTLQHQFEELARERVGDN-NSKESKRS 490
                  + L  L+S PL+ K FSHR+LAG+GV+P +Q Q ++LAR+++ D+  S   K+ 
Sbjct: 684  QLKKLQEDLKILISRPLQSKTFSHRYLAGAGVTPLMQEQLQQLARQKLSDHQGSGLGKKG 743

Query: 489  KLVVIGQNCVEPLEALRSAGDEVRFDVK-VTGDRRSIVDLKRKRKAEKKNLRDKRRDARK 313
            KLVVIGQ+CV+ L+ALRSAG+EVR D K + G +R++ +LKRKRK EKK LRD+RR  +K
Sbjct: 744  KLVVIGQDCVDALQALRSAGEEVRMDAKDLAGKQRNMQNLKRKRKEEKKRLRDQRRKQKK 803

Query: 312  ELRRNNE 292
            +L+  +E
Sbjct: 804  KLKYGDE 810


>ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
            sativus]
          Length = 848

 Score =  695 bits (1794), Expect = 0.0
 Identities = 357/542 (65%), Positives = 436/542 (80%), Gaps = 1/542 (0%)
 Frame = -3

Query: 1926 LRALIITPTRELALQVADHLKEASKLTNIRVVPIVGGMSTEKQERLLRYRPDIVVGTPGR 1747
            LRALIITPTRELALQV DHLK  +   +IRVVPIVGGMSTEKQERLLR RP++VVGTPGR
Sbjct: 306  LRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGR 365

Query: 1746 LWELMSGGDEHLAELNSVSFFVLDEADRMIENGHFQELQSIIDMLPMFGGSVEGNSEMTQ 1567
            LWELMSGG++HL EL ++SFFVLDEADRMIENGHF+ELQSIIDMLP+  GS E N +  +
Sbjct: 366  LWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAE-NLQNAE 424

Query: 1566 NSVAVTSLQRKKRQTFVFSATIALSADFRXXXXXXXXXXXXSMDDGRMSSLESLSARAGM 1387
            NS+     QRKKRQT VFSAT++LS+DFR            S  DG ++S+E+LS RAG+
Sbjct: 425  NSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDG-LNSIEALSERAGI 483

Query: 1386 RADAAIIDLTNASIMAHKLEESFIECREEDKDGYLYYLLSVHGRGRTIVFCTSIAALRHI 1207
            R + A+I+LTN S++A+ LEESFIECREEDKD YLYY+LSV+G+GRTIVFCTSIAALRHI
Sbjct: 484  RPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFCTSIAALRHI 543

Query: 1206 SSILRILGINIWTLHAQMQQRARLKAIDRFRGNEHAVLIATDVAARGLDIPGVRTVIHYQ 1027
            +++L I+G+N+ TLHAQ QQRARLKAIDRFRG+++ +LIATDVAARGLDIPGVRTV+HYQ
Sbjct: 544  AALLSIVGVNVLTLHAQRQQRARLKAIDRFRGSQNGILIATDVAARGLDIPGVRTVVHYQ 603

Query: 1026 LPHSAEVYVHRSGRTARASSDGCCIALISPNDKSKFTSLCKSFSKESLQRFPLDNSLMPE 847
            LPHSAEVYVHRSGRTARAS+DGC IAL+S N+ SKF SLCKSFSKES QRFP+DNS MPE
Sbjct: 604  LPHSAEVYVHRSGRTARASADGCSIALVSANETSKFASLCKSFSKESFQRFPVDNSYMPE 663

Query: 846  VVKRLSLARQIDKVLRKDSQEKAQKSWFERNAEAMELDVDDNDSEEDKVNXXXXXXXXXX 667
            V+KRLSLARQIDK++RK+SQEKA K+WFERNAE +EL VD++DSEE++ N          
Sbjct: 664  VLKRLSLARQIDKIVRKESQEKASKTWFERNAELVELVVDNDDSEEERANNYKQKKVGCI 723

Query: 666  XXXXXXQALNSLLSCPLRPKMFSHRFLAGSGVSPTLQHQFEELARERVGDNNSKESKRSK 487
                  Q L+ LLS PL+PK FSHR+LAG+GVSP LQHQFEELA++        ++KR K
Sbjct: 724  QLKKLQQELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEELAKQNTSVQTMGDNKRRK 783

Query: 486  LVVIGQNCVEPLEALRSAGDEVRFDVKVTGD-RRSIVDLKRKRKAEKKNLRDKRRDARKE 310
            L   GQ+  EPL+ALR+ G +V  + K   + RR + ++K+K+K EKK LRD+RR+ RK+
Sbjct: 784  LAAFGQDLTEPLQALRTGGQQVHMNAKEMAEKRRKMENVKKKKKEEKKRLRDQRRNKRKQ 843

Query: 309  LR 304
            ++
Sbjct: 844  MK 845


>ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 798

 Score =  690 bits (1780), Expect = 0.0
 Identities = 354/547 (64%), Positives = 435/547 (79%), Gaps = 2/547 (0%)
 Frame = -3

Query: 1926 LRALIITPTRELALQVADHLKEASKLTNIRVVPIVGGMSTEKQERLLRYRPDIVVGTPGR 1747
            LR+LII PTRELALQVA HLK  +K  N+RV  IVGG+  EKQERLL+ RP+IVV TPGR
Sbjct: 253  LRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGGILPEKQERLLKARPEIVVATPGR 312

Query: 1746 LWELMSGGDEHLAELNSVSFFVLDEADRMIENGHFQELQSIIDMLPMFGGSVEGNSEMTQ 1567
            LWELMS G++HL EL+S+SFFVLDEADRM+++GHF+ELQSIIDMLPM   S E NS+  Q
Sbjct: 313  LWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNISSEDNSKDAQ 372

Query: 1566 NSVAVTSLQRKKRQTFVFSATIALSADFRXXXXXXXXXXXXSMDDGRMSSLESLSARAGM 1387
            N V V+S+Q+KKRQT VFSAT+ALSADFR               DG + S+E+LS RAGM
Sbjct: 373  NCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQKKQLSTDG-LDSIETLSERAGM 431

Query: 1386 RADAAIIDLTNASIMAHKLEESFIECREEDKDGYLYYLLSVHGRGRTIVFCTSIAALRHI 1207
            R +AAIIDLTN SI+A K+EESFIEC E+DKD +LYY+L+VHG+GRTIVFCTSIAALRHI
Sbjct: 432  RPNAAIIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTVHGQGRTIVFCTSIAALRHI 491

Query: 1206 SSILRILGINIWTLHAQMQQRARLKAIDRFRGNEHAVLIATDVAARGLDIPGVRTVIHYQ 1027
            SSILRILG+N+WTLHAQMQQRARLKA+DRFR N++ +L+ATDVAARGLDIPGVRTV+HYQ
Sbjct: 492  SSILRILGVNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQ 551

Query: 1026 LPHSAEVYVHRSGRTARASSDGCCIALISPNDKSKFTSLCKSFSKESLQRFPLDNSLMPE 847
            LPHSAEVYVHRSGRTARAS++GC IALISP + SKF SLCKSFSK++ QRFP++NS MPE
Sbjct: 552  LPHSAEVYVHRSGRTARASAEGCSIALISPKETSKFASLCKSFSKDNFQRFPVENSYMPE 611

Query: 846  VVKRLSLARQIDKVLRKDSQEKAQKSWFERNAEAMELDVDDNDSEEDKVNXXXXXXXXXX 667
            V+KRLSLARQIDK+ RKDSQEKA+KSWF+RNA +++L  ++ DSEE++VN          
Sbjct: 612  VLKRLSLARQIDKITRKDSQEKAEKSWFDRNASSVDLVTENYDSEEEQVNKCRQKKASSK 671

Query: 666  XXXXXXQALNSLLSCPLRPKMFSHRFLAGSGVSPTLQHQFEELARERVGDNNSKE-SKRS 490
                    L+ L+S PL+ K FSHR+LAG+GV+P LQ Q ++LAR+++ D       K+ 
Sbjct: 672  QLKKLQMELSMLISRPLQSKTFSHRYLAGAGVTPLLQEQLQQLARQKISDRQGAGFGKKG 731

Query: 489  KLVVIGQNCVEPLEALRSAGDEVRFDVK-VTGDRRSIVDLKRKRKAEKKNLRDKRRDARK 313
            +LVVIGQ+CV+ L ALRSAG+EVR D K  T  +R++V+ KRKRK EK  LRD+R+  +K
Sbjct: 732  RLVVIGQDCVDALHALRSAGEEVRMDTKDSTRGQRNMVNAKRKRKEEKTRLRDQRKKKKK 791

Query: 312  ELRRNNE 292
                ++E
Sbjct: 792  NQNEDDE 798


>ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
            [Cucumis sativus]
          Length = 784

 Score =  663 bits (1711), Expect = 0.0
 Identities = 340/501 (67%), Positives = 407/501 (81%)
 Frame = -3

Query: 1926 LRALIITPTRELALQVADHLKEASKLTNIRVVPIVGGMSTEKQERLLRYRPDIVVGTPGR 1747
            LRALIITPTRELALQV DHLK  +   +IRVVPIVGGMSTEKQERLLR RP++VVGTPGR
Sbjct: 286  LRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGR 345

Query: 1746 LWELMSGGDEHLAELNSVSFFVLDEADRMIENGHFQELQSIIDMLPMFGGSVEGNSEMTQ 1567
            LWELMSGG++HL EL ++SFFVLDEADRMIENGHF+ELQSIIDMLP+  GS E N +  +
Sbjct: 346  LWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAE-NLQNAE 404

Query: 1566 NSVAVTSLQRKKRQTFVFSATIALSADFRXXXXXXXXXXXXSMDDGRMSSLESLSARAGM 1387
            NS+     QRKKRQT VFSAT++LS+DFR            S  DG ++S+E+LS RAG+
Sbjct: 405  NSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDG-LNSIEALSERAGI 463

Query: 1386 RADAAIIDLTNASIMAHKLEESFIECREEDKDGYLYYLLSVHGRGRTIVFCTSIAALRHI 1207
            R + A+I+LTN S++A+ LEESFIECREEDKD YLYY+LSV+G+GRTIVFCTSIAALRHI
Sbjct: 464  RPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFCTSIAALRHI 523

Query: 1206 SSILRILGINIWTLHAQMQQRARLKAIDRFRGNEHAVLIATDVAARGLDIPGVRTVIHYQ 1027
            +++L I+G+N+ TLHAQ QQRARLKAIDRFRG+++ +LIATDVAARGLDIPGVRTV+HYQ
Sbjct: 524  AALLSIVGVNVLTLHAQRQQRARLKAIDRFRGSQNGILIATDVAARGLDIPGVRTVVHYQ 583

Query: 1026 LPHSAEVYVHRSGRTARASSDGCCIALISPNDKSKFTSLCKSFSKESLQRFPLDNSLMPE 847
            LPHSAEVYVHRSGRTARAS+DGC IAL+S N+ SKF SLCKSFSKES QRFP+DNS MPE
Sbjct: 584  LPHSAEVYVHRSGRTARASADGCSIALVSANETSKFASLCKSFSKESFQRFPVDNSYMPE 643

Query: 846  VVKRLSLARQIDKVLRKDSQEKAQKSWFERNAEAMELDVDDNDSEEDKVNXXXXXXXXXX 667
            V+KRLSLARQIDK++RK+SQEKA K+WFERNAE +EL VD++DSEE++ N          
Sbjct: 644  VLKRLSLARQIDKIVRKESQEKASKTWFERNAELVELVVDNDDSEEERANNYKQKKVGCI 703

Query: 666  XXXXXXQALNSLLSCPLRPKMFSHRFLAGSGVSPTLQHQFEELARERVGDNNSKESKRSK 487
                  Q L+ LLS PL+PK FSHR+LAG+GVSP LQHQFEELA++        ++KR K
Sbjct: 704  HLKKLQQELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEELAKQNTSVQTMGDNKRRK 763

Query: 486  LVVIGQNCVEPLEALRSAGDE 424
            L   GQ+  EPL+ALR+ G +
Sbjct: 764  LAAFGQDLTEPLQALRTGGQQ 784


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