BLASTX nr result

ID: Cimicifuga21_contig00007232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007232
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]   417   e-114
ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249...   404   e-110
ref|XP_002517598.1| racemase and epimerase, acting on amino acid...   400   e-109
ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|2...   393   e-107
emb|CBI36279.3| unnamed protein product [Vitis vinifera]              387   e-105

>emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
          Length = 330

 Score =  417 bits (1071), Expect = e-114
 Identities = 216/328 (65%), Positives = 255/328 (77%), Gaps = 6/328 (1%)
 Frame = -2

Query: 1248 MTMALQSFNCPSHFVGSTSKQIVRF----NPTVSIQPSSILSQNNGRGDFTVSKKGPFSG 1081
            M M+  S   PSH +G+  K  +      NP +++ PSS L Q +  G+   SK    S 
Sbjct: 1    MAMSFHSLKYPSHMMGNVHKHXILXRTMKNPILAVPPSSTLLQTDESGNLPESKNSSGSD 60

Query: 1080 SSLGNNRITSL-LSEVNTIGILGGVSALSTLNFLDKLVRWSSK-GEETLPFVVCSDPVLN 907
            ++  N+   SL +++  T+GI+GGVS  STLNFL KLV+WSSK G ++LPFV+CSDPVLN
Sbjct: 61   AASTNSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLN 120

Query: 906  KKLLFHERSSFPNLKTNESRPQSNPTPIVENLRKKVAFLEQAGARCIVMPCHISHAWHDE 727
            K+LL HERS FP L T     + + TPIV NL+ K AFLE++G +CIVMPCHISH+WHDE
Sbjct: 121  KQLLSHERSHFPLLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDE 180

Query: 726  ISRGCSLPFLHVGECVAKELKKANLKPLEAGSSLRIGVLATDATLKAGFYQEKLQSEGFE 547
            ISRG S+PFLH+GECVA+ELK A LKPLEAGS LRIGVLAT+ATL AGFYQEKLQ EGFE
Sbjct: 181  ISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFE 240

Query: 546  VVLPDRATMEHTVIPAIEALNSKDMEGARNLFRIALQVLLVRAVNIVIFASDDMRGLLPR 367
            VVLPD+ATMEHTVIPAIEALN KDMEGARNL RIALQVLLVRAVN VI ASDDM  LLPR
Sbjct: 241  VVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPR 300

Query: 366  DDPLLKRCIDPMDALARSTINWAKATEK 283
            DDPLLK+C+DPMDALARSTI+WA++ EK
Sbjct: 301  DDPLLKKCVDPMDALARSTIHWAQSVEK 328


>ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249822 [Vitis vinifera]
          Length = 305

 Score =  404 bits (1039), Expect = e-110
 Identities = 207/299 (69%), Positives = 242/299 (80%), Gaps = 2/299 (0%)
 Frame = -2

Query: 1173 NPTVSIQPSSILSQNNGRGDFTVSKKGPFSGSSLGNNRITSL-LSEVNTIGILGGVSALS 997
            NP +++ PSS L Q +  G+   SK    S ++  N+   SL +++  T+GI+GGVS  S
Sbjct: 3    NPILAVPPSSTLLQTDESGNLPESKNSSGSDAASTNSDSASLFINQATTVGIIGGVSVDS 62

Query: 996  TLNFLDKLVRWSSK-GEETLPFVVCSDPVLNKKLLFHERSSFPNLKTNESRPQSNPTPIV 820
            TLNFL KLV+WSSK G ++LPFV+CSDPVLNK+LL HERS FP L T     + + TPIV
Sbjct: 63   TLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKRESSRMDHTPIV 122

Query: 819  ENLRKKVAFLEQAGARCIVMPCHISHAWHDEISRGCSLPFLHVGECVAKELKKANLKPLE 640
             NL+ K AFLE++G +CIVMPCHISH+WHDEISRG S+PFLH+GECVA+ELK A LKPLE
Sbjct: 123  GNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLE 182

Query: 639  AGSSLRIGVLATDATLKAGFYQEKLQSEGFEVVLPDRATMEHTVIPAIEALNSKDMEGAR 460
            AGS LRIGVLAT+ATL AGFYQEKLQ EGFEVVLPD+ATMEHTVIPAIEA N KDMEGAR
Sbjct: 183  AGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGAR 242

Query: 459  NLFRIALQVLLVRAVNIVIFASDDMRGLLPRDDPLLKRCIDPMDALARSTINWAKATEK 283
            NL RIALQVLLVRAVN VI ASDDM  LLPRDDPLLK+C+DPMDALARSTI+WA++ EK
Sbjct: 243  NLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVEK 301


>ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
            putative [Ricinus communis] gi|223543230|gb|EEF44762.1|
            racemase and epimerase, acting on amino acids and
            derivatives, putative [Ricinus communis]
          Length = 330

 Score =  400 bits (1029), Expect = e-109
 Identities = 207/333 (62%), Positives = 256/333 (76%), Gaps = 5/333 (1%)
 Frame = -2

Query: 1263 MFDETMTMALQSFNCPSHFVGSTSKQIV----RFNPTVSIQPSSILSQNNGRGDFTVSKK 1096
            MFD ++ M+  S N PSH   + +        R N   ++ PSS++   +  G F  SKK
Sbjct: 1    MFDGSLIMSFHSLNYPSHRFNNVNTHKTSYKARSNLVQAVPPSSVILHTDESGRFRGSKK 60

Query: 1095 GPFSGSSLGNNRITSLLSEVNTIGILGGVSALSTLNFLDKLVRWSSK-GEETLPFVVCSD 919
               SGS+  ++ +  LL++ NT+GI+GG S    LNFL KLV+WSS+ G+++LPFV+CSD
Sbjct: 61   S--SGSTSDSSDL--LLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLCSD 116

Query: 918  PVLNKKLLFHERSSFPNLKTNESRPQSNPTPIVENLRKKVAFLEQAGARCIVMPCHISHA 739
            PVLNK+LL HER  FP++   +   + +   IVENLR K  FLE++GARCIVMPCHISH+
Sbjct: 117  PVLNKELLSHERDFFPSIGRQKEYSKLDHAQIVENLRSKRVFLERSGARCIVMPCHISHS 176

Query: 738  WHDEISRGCSLPFLHVGECVAKELKKANLKPLEAGSSLRIGVLATDATLKAGFYQEKLQS 559
            WH+++S+GCS+ FLH+GECVA+ELK+A LKPLEAGS LRIGVLA +ATL AGFYQEKLQS
Sbjct: 177  WHEQVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLAANATLTAGFYQEKLQS 236

Query: 558  EGFEVVLPDRATMEHTVIPAIEALNSKDMEGARNLFRIALQVLLVRAVNIVIFASDDMRG 379
            EGFEVVLPD+ATMEHT+IPAI ALN KDMEGARNL RIALQVLLVRAVN VI ASDDMR 
Sbjct: 237  EGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRD 296

Query: 378  LLPRDDPLLKRCIDPMDALARSTINWAKATEKE 280
            LLP++DPLLK+CIDPMDAL R+TI WAKA EK+
Sbjct: 297  LLPQNDPLLKKCIDPMDALVRATIKWAKAAEKD 329


>ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|222840690|gb|EEE78237.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  393 bits (1009), Expect = e-107
 Identities = 203/332 (61%), Positives = 252/332 (75%), Gaps = 5/332 (1%)
 Frame = -2

Query: 1263 MFDETMTMALQSFNCPSHFVGSTSKQIV----RFNPTVSIQPSSILSQNNGRGDFTVSKK 1096
            MFD ++ M   + + P H +G  +        R  P ++I PSSIL   +  G F  SKK
Sbjct: 1    MFDGSLAMPFHTLH-PCHLLGHVNTHRALHKSRLQPVLAIPPSSILLHTDESGKFPDSKK 59

Query: 1095 GPFSGSSLGNNRITSLLSEVNTIGILGGVSALSTLNFLDKLVRWSSK-GEETLPFVVCSD 919
            G       G +   SLLS+ NT+GI+GG+S  S LNFL KLV+ SSK G++  PFV+CSD
Sbjct: 60   G---SGLRGRDSSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPFVLCSD 116

Query: 918  PVLNKKLLFHERSSFPNLKTNESRPQSNPTPIVENLRKKVAFLEQAGARCIVMPCHISHA 739
            PVLNK+LL HER+S P  + +  +  S+ + I ENL+ K  FLE++G +CIVMPCHI H+
Sbjct: 117  PVLNKELLSHERNSCPCPRRHNEKSPSDHSAIAENLQNKRVFLEKSGVQCIVMPCHILHS 176

Query: 738  WHDEISRGCSLPFLHVGECVAKELKKANLKPLEAGSSLRIGVLATDATLKAGFYQEKLQS 559
            WHDE+S+GCSLPFLH+GECVA+ELK+A LKPLEAGS LRIG+LA++ATL AGFYQEKLQ+
Sbjct: 177  WHDEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLASNATLAAGFYQEKLQN 236

Query: 558  EGFEVVLPDRATMEHTVIPAIEALNSKDMEGARNLFRIALQVLLVRAVNIVIFASDDMRG 379
            EGFEVVLPD+ATMEHT+IPAIEAL+  DMEGA+NL RIALQVLLVRAVN VI AS++MR 
Sbjct: 237  EGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEMRD 296

Query: 378  LLPRDDPLLKRCIDPMDALARSTINWAKATEK 283
            +LP DDPLLK+CIDPMDALARSTI WA+A +K
Sbjct: 297  VLPEDDPLLKKCIDPMDALARSTIKWAQAADK 328


>emb|CBI36279.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  387 bits (993), Expect = e-105
 Identities = 194/256 (75%), Positives = 218/256 (85%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1047 LSEVNTIGILGGVSALSTLNFLDKLVRWSSK-GEETLPFVVCSDPVLNKKLLFHERSSFP 871
            L    T+GI+GGVS  STLNFL KLV+WSSK G ++LPFV+CSDPVLNK+LL HERS FP
Sbjct: 184  LMRTTTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFP 243

Query: 870  NLKTNESRPQSNPTPIVENLRKKVAFLEQAGARCIVMPCHISHAWHDEISRGCSLPFLHV 691
             L T     + + TPIV NL+ K AFLE++G +CIVMPCHISH+WHDEISRG S+PFLH+
Sbjct: 244  LLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHM 303

Query: 690  GECVAKELKKANLKPLEAGSSLRIGVLATDATLKAGFYQEKLQSEGFEVVLPDRATMEHT 511
            GECVA+ELK A LKPLEAGS LRIGVLAT+ATL AGFYQEKLQ EGFEVVLPD+ATMEHT
Sbjct: 304  GECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHT 363

Query: 510  VIPAIEALNSKDMEGARNLFRIALQVLLVRAVNIVIFASDDMRGLLPRDDPLLKRCIDPM 331
            VIPAIEA N KDMEGARNL RIALQVLLVRAVN VI ASDDM  LLPRDDPLLK+C+DPM
Sbjct: 364  VIPAIEAFNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPM 423

Query: 330  DALARSTINWAKATEK 283
            DALARSTI+WA++ EK
Sbjct: 424  DALARSTIHWAQSVEK 439


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