BLASTX nr result
ID: Cimicifuga21_contig00007196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00007196 (557 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD21599.1| nucleolar RNA-binding Nop10p-like protein [Oryza... 130 1e-28 ref|XP_004151989.1| PREDICTED: H/ACA ribonucleoprotein complex s... 129 3e-28 ref|NP_001173081.1| Os02g0618250 [Oryza sativa Japonica Group] g... 127 9e-28 gb|ADB08692.1| nucleolar RNA-binding Nop10p-like protein [Wolffi... 127 2e-27 gb|AFK42858.1| unknown [Lotus japonicus] 125 4e-27 >dbj|BAD21599.1| nucleolar RNA-binding Nop10p-like protein [Oryza sativa Japonica Group] gi|47847676|dbj|BAD21457.1| nucleolar RNA-binding Nop10p-like protein [Oryza sativa Japonica Group] Length = 258 Score = 130 bits (328), Expect = 1e-28 Identities = 62/71 (87%), Positives = 65/71 (91%) Frame = -2 Query: 457 FDLALVKMYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRFLLKKRFG 278 F L KMYLQ+YINE GDKVYTTKKESPLG+ TQSAHPARFSPDDKYSRQR+LLKKRFG Sbjct: 188 FRLRRSKMYLQYYINEKGDKVYTTKKESPLGVPTQSAHPARFSPDDKYSRQRYLLKKRFG 247 Query: 277 LLPTQKPAPKY 245 LLPTQKPAPKY Sbjct: 248 LLPTQKPAPKY 258 >ref|XP_004151989.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein-like [Cucumis sativus] gi|449514990|ref|XP_004164533.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein-like [Cucumis sativus] Length = 64 Score = 129 bits (324), Expect = 3e-28 Identities = 61/64 (95%), Positives = 62/64 (96%) Frame = -2 Query: 436 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRFLLKKRFGLLPTQKP 257 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQR LLKKRFGLLPTQ+P Sbjct: 1 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60 Query: 256 APKY 245 PKY Sbjct: 61 PPKY 64 >ref|NP_001173081.1| Os02g0618250 [Oryza sativa Japonica Group] gi|218191183|gb|EEC73610.1| hypothetical protein OsI_08093 [Oryza sativa Indica Group] gi|222623254|gb|EEE57386.1| hypothetical protein OsJ_07547 [Oryza sativa Japonica Group] gi|255671098|dbj|BAH91810.1| Os02g0618250 [Oryza sativa Japonica Group] Length = 64 Score = 127 bits (320), Expect = 9e-28 Identities = 59/64 (92%), Positives = 62/64 (96%) Frame = -2 Query: 436 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRFLLKKRFGLLPTQKP 257 MYLQ+YINE GDKVYTTKKESPLG+ TQSAHPARFSPDDKYSRQR+LLKKRFGLLPTQKP Sbjct: 1 MYLQYYINEKGDKVYTTKKESPLGVPTQSAHPARFSPDDKYSRQRYLLKKRFGLLPTQKP 60 Query: 256 APKY 245 APKY Sbjct: 61 APKY 64 >gb|ADB08692.1| nucleolar RNA-binding Nop10p-like protein [Wolffia arrhiza] Length = 64 Score = 127 bits (318), Expect = 2e-27 Identities = 60/64 (93%), Positives = 61/64 (95%) Frame = -2 Query: 436 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRFLLKKRFGLLPTQKP 257 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQR +LKK FGLLPTQKP Sbjct: 1 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVMLKKWFGLLPTQKP 60 Query: 256 APKY 245 PKY Sbjct: 61 PPKY 64 >gb|AFK42858.1| unknown [Lotus japonicus] Length = 64 Score = 125 bits (314), Expect = 4e-27 Identities = 59/64 (92%), Positives = 61/64 (95%) Frame = -2 Query: 436 MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRFLLKKRFGLLPTQKP 257 MYLQFYIN+NGDKVYTTKKESPLG ATQSAHPARFSPDDKYSRQR LLKKRFGLLPTQ+P Sbjct: 1 MYLQFYINDNGDKVYTTKKESPLGNATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60 Query: 256 APKY 245 PKY Sbjct: 61 PPKY 64