BLASTX nr result

ID: Cimicifuga21_contig00007178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007178
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm...   101   7e-20
gb|AFK47750.1| unknown [Lotus japonicus]                               81   8e-14
gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays]         81   1e-13
gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indi...    81   1e-13

>ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = -3

Query: 360 RTNITCSCQSHEPIRFSDPK-KGQKEKVSNIFSKLYVGIGKLGKGLKESLSPKNKGDWKD 184
           R  I  SCQ  EPI  S  K K + ++   +  +L+  +   GKGLK++LSPK KGDWKD
Sbjct: 27  RILILLSCQRGEPIDTSSSKPKKEIKQDKQLVRQLFGSVENFGKGLKDNLSPKRKGDWKD 86

Query: 183 VMLMSVSFAVYVYISQKLVIAYCYWISMLKQ 91
           VMLMS+SFAVYVY+SQK+V AYC W+SMLKQ
Sbjct: 87  VMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQ 117


>ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis]
           gi|223543079|gb|EEF44614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -3

Query: 360 RTNITCSCQSHEPIRFSDPK--KGQKEKVSNIFSKLYVGIGKLGKGLKESLSPKNKGDWK 187
           R  +  SCQ  EPI  S PK  +  K++   +  +L+V   K  KG+K++LSPK KGDWK
Sbjct: 27  RIIVHLSCQRDEPIDSSSPKVKEEMKQEKQVMVRQLFVSAEKFAKGVKDNLSPKQKGDWK 86

Query: 186 DVMLMSVSFAVYVYISQKLVIAYCYWISMLKQ 91
           DV+LMS+SFAVYVYISQ++V AYC W SMLKQ
Sbjct: 87  DVVLMSLSFAVYVYISQQIVCAYCAWTSMLKQ 118


>gb|AFK47750.1| unknown [Lotus japonicus]
          Length = 123

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -3

Query: 360 RTNITCSCQSHEPIRFSDP---KKGQKEKVSNIFS-KLYVGIGKLGKGLKESLSPKNKGD 193
           R  I  +CQ       S+P   K  +  K+ N+   K+  G  KLGK  +++LSPK KGD
Sbjct: 28  RIFILVACQGGRLASNSNPDEKKDMRGGKLINLLKWKVLNGFEKLGKRPEQNLSPKQKGD 87

Query: 192 WKDVMLMSVSFAVYVYISQKLVIAYCYWISMLK 94
           WKD+ LMS+SFA+YVYISQKLV AYC W S+ K
Sbjct: 88  WKDLFLMSISFALYVYISQKLVCAYCAWTSLPK 120


>gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays]
          Length = 177

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/101 (48%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
 Frame = -3

Query: 366 ASRTNITCSCQSHEPIRFSDPKK-------GQKEKVSNIFS----KLYVGIGKLGKGLKE 220
           +SR      CQSH P   S P         G +EK +  ++    +L   + K G   +E
Sbjct: 78  SSRPRSYLVCQSHLP---SGPPASGGGGGGGGEEKTTPWWAATAERLRGDVVKAGMAARE 134

Query: 219 SLSPKNKGDWKDVMLMSVSFAVYVYISQKLVIAYCYWISML 97
           SLSPK KGDWKDV LMS SFAVYVYISQKLV  YC W+SM+
Sbjct: 135 SLSPKQKGDWKDVTLMSFSFAVYVYISQKLVCTYCAWLSMI 175


>gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indica Group]
          Length = 143

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 264 KLYVGIGKLGKGLKESLSPKNKGDWKDVMLMSVSFAVYVYISQKLVIAYCYWISML 97
           +++    K G+ ++ESLSPK KGDWKDV LMS SFAVYVYISQK+V  YC WISM+
Sbjct: 86  RVFGDAAKAGRAVRESLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


Top