BLASTX nr result
ID: Cimicifuga21_contig00007174
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00007174 (380 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||S54157 extensin-like protein - cowpea (fragment) 60 2e-07 ref|XP_002623132.1| viral protein TPX [Ajellomyces dermatitidis ... 56 3e-06 dbj|BAD94515.1| peroxisome proliferator-activated receptor gamma... 55 5e-06 >pir||S54157 extensin-like protein - cowpea (fragment) Length = 279 Score = 60.1 bits (144), Expect = 2e-07 Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Frame = +2 Query: 101 HHRHLLQSMNLLH----HQRSTSSHHHPNGIGHHIRTIISHHHLQSISRHLHQCTNHHRH 268 HH + S++LLH H S HH + + HH+ SHH L + HLH C + H H Sbjct: 193 HHLPMFTSLHLLHLLPHHLPMCISPHHHHLLHHHLLMFTSHHLLHLLPHHLHMCISRHHH 252 Query: 269 LLQSMNLLHHQ--RSTSSHHH 325 +LLHH STS HHH Sbjct: 253 -----HLLHHHLLMSTSPHHH 268 >ref|XP_002623132.1| viral protein TPX [Ajellomyces dermatitidis SLH14081] gi|239588737|gb|EEQ71380.1| viral protein TPX [Ajellomyces dermatitidis SLH14081] Length = 425 Score = 55.8 bits (133), Expect = 3e-06 Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = +2 Query: 95 TNHHRHLLQSMNLL----HHQRSTSSHHHPNGIGHHIRTIISHHHLQSISRHLHQCTNHH 262 +NHH H Q + HH TS+HHH G HH HHH H H +NHH Sbjct: 318 SNHHHHHYQPCHHHYTGDHHYHHTSNHHHHTGDHHHHHYQPCHHHYTG-DHHYHHTSNHH 376 Query: 263 RHLLQSMNL-LHHQRSTSSHHH 325 H + +H TS HHH Sbjct: 377 HHTGDHHHYSRNHYHYTSDHHH 398 >dbj|BAD94515.1| peroxisome proliferator-activated receptor gamma [Oncorhynchus keta] Length = 662 Score = 55.5 bits (132), Expect = 5e-06 Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Frame = +2 Query: 98 NHHRHLLQSMNLLHHQRSTSSHHHPNGIGHHIRTIISHHHL-QSISRHLHQCTNHHRHLL 274 +HH H N HH S HHH + HH HHH S H H +HH H Sbjct: 62 HHHSH-----NSFHHHSHNSPHHHSHNSPHHHSHNSPHHHSHNSPHHHSHNSPHHHSH-- 114 Query: 275 QSMNLLHHQRSTSSHHH 325 N LHH S HHH Sbjct: 115 ---NSLHHHSHNSPHHH 128