BLASTX nr result

ID: Cimicifuga21_contig00007174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007174
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S54157 extensin-like protein - cowpea (fragment)                  60   2e-07
ref|XP_002623132.1| viral protein TPX [Ajellomyces dermatitidis ...    56   3e-06
dbj|BAD94515.1| peroxisome proliferator-activated receptor gamma...    55   5e-06

>pir||S54157 extensin-like protein - cowpea (fragment)
          Length = 279

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
 Frame = +2

Query: 101 HHRHLLQSMNLLH----HQRSTSSHHHPNGIGHHIRTIISHHHLQSISRHLHQCTNHHRH 268
           HH  +  S++LLH    H     S HH + + HH+    SHH L  +  HLH C + H H
Sbjct: 193 HHLPMFTSLHLLHLLPHHLPMCISPHHHHLLHHHLLMFTSHHLLHLLPHHLHMCISRHHH 252

Query: 269 LLQSMNLLHHQ--RSTSSHHH 325
                +LLHH    STS HHH
Sbjct: 253 -----HLLHHHLLMSTSPHHH 268


>ref|XP_002623132.1| viral protein TPX [Ajellomyces dermatitidis SLH14081]
           gi|239588737|gb|EEQ71380.1| viral protein TPX
           [Ajellomyces dermatitidis SLH14081]
          Length = 425

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +2

Query: 95  TNHHRHLLQSMNLL----HHQRSTSSHHHPNGIGHHIRTIISHHHLQSISRHLHQCTNHH 262
           +NHH H  Q  +      HH   TS+HHH  G  HH      HHH      H H  +NHH
Sbjct: 318 SNHHHHHYQPCHHHYTGDHHYHHTSNHHHHTGDHHHHHYQPCHHHYTG-DHHYHHTSNHH 376

Query: 263 RHLLQSMNL-LHHQRSTSSHHH 325
            H     +   +H   TS HHH
Sbjct: 377 HHTGDHHHYSRNHYHYTSDHHH 398


>dbj|BAD94515.1| peroxisome proliferator-activated receptor gamma [Oncorhynchus
           keta]
          Length = 662

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +2

Query: 98  NHHRHLLQSMNLLHHQRSTSSHHHPNGIGHHIRTIISHHHL-QSISRHLHQCTNHHRHLL 274
           +HH H     N  HH    S HHH +   HH      HHH   S   H H   +HH H  
Sbjct: 62  HHHSH-----NSFHHHSHNSPHHHSHNSPHHHSHNSPHHHSHNSPHHHSHNSPHHHSH-- 114

Query: 275 QSMNLLHHQRSTSSHHH 325
              N LHH    S HHH
Sbjct: 115 ---NSLHHHSHNSPHHH 128


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