BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007166
         (3427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu...  1324   0.0  
emb|CBI36846.3| unnamed protein product [Vitis vinifera]             1298   0.0  
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...  1289   0.0  
ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...  1212   0.0  
ref|XP_002882127.1| zinc finger helicase family protein [Arabido...  1203   0.0  

>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1025

 Score = 1324 bits (3426), Expect = 0.0
 Identities = 666/997 (66%), Positives = 782/997 (78%), Gaps = 14/997 (1%)
 Frame = -2

Query: 3240 LPVMALKDKIVEKILENRVTLIIGETGCGKSSQVPQFILQEGMEPILCTQPXXXXXXXXX 3061
            LP+M+L+ KIVEK+LENRVTLI+G+TGCGKSSQVPQF+L+E MEPILCTQP         
Sbjct: 27   LPIMSLRQKIVEKVLENRVTLIVGDTGCGKSSQVPQFLLEENMEPILCTQPRRFAVVAVA 86

Query: 3060 XXXXXXRGCEVGQEVGYHIGHSKVISEGSKIVFKTAGVLLDEMRDKGIDALRYKVIILDE 2881
                  R CE+G EVGYHIGH K +SE SKIVFKTAGVL DEMR+KG++AL+YKVIILDE
Sbjct: 87   KMVAKARNCELGGEVGYHIGHLKHLSERSKIVFKTAGVLSDEMREKGLNALKYKVIILDE 146

Query: 2880 VHERSVESDLVLAFVKQFLLKNNDLRVVLMSATADIARYRDYFRDLGRGERVEVLAIPTS 2701
            VHERS+ESDLVL  VKQFLL+NNDLRVVLMSATAD  RYRDYF+DLGRGERVEVLAIP+S
Sbjct: 147  VHERSIESDLVLVCVKQFLLRNNDLRVVLMSATADFGRYRDYFKDLGRGERVEVLAIPSS 206

Query: 2700 TQQAIFQRRVLYLEQ---VNEVLGMD--SEPSGHSTEAEIKPEEHKLIHNLVLHIHENEP 2536
             QQA+FQRRV YLEQ    ++VL     S PS     A+IKPE HKLIH+LV+HIH+NEP
Sbjct: 207  NQQALFQRRVSYLEQEITCSQVLATKYCSGPSPAMVSADIKPEVHKLIHDLVMHIHDNEP 266

Query: 2535 DLEKSILVFLPTYYSLEQQWSLLKPFSSHFKVHILHRSIDTDQALMAMKIWKSHRKVILA 2356
            D+EK ILVFLPTY+ L QQW LLKP  S FKVHILH SIDT+QAL+AMKIWKSHRKVILA
Sbjct: 267  DIEKGILVFLPTYHDLLQQWYLLKPLGSCFKVHILHGSIDTEQALLAMKIWKSHRKVILA 326

Query: 2355 TNIAESSVTIPGVAYVIDSCRSLQVFWDNIRKKDSPELVWVSKSQAEQRKGRTGRTCDGQ 2176
            TNIAESSVTIP VAYVIDSCRSLQVFWD  RKKD  ELVWVSKSQA+QRKGRTGRTCDGQ
Sbjct: 327  TNIAESSVTIPKVAYVIDSCRSLQVFWDGTRKKDYAELVWVSKSQADQRKGRTGRTCDGQ 386

Query: 2175 IYRLVSRSFFNKLNEHEQPAILRLSLRQQVLLICSAQSKAINDPKVLLQKALDPPDSEVV 1996
            IYRLV+RSFFNKL E+E PAILRLSLRQQVL++C A+SKAINDP+VLLQK LDPPD  V+
Sbjct: 387  IYRLVTRSFFNKLQEYESPAILRLSLRQQVLMVCCAESKAINDPRVLLQKTLDPPDPRVI 446

Query: 1995 DDALSLLVRIQALERSTSHRGRYEPTFYGRLLATLSLSFDASFLILKFGNVGLLHEGIVI 1816
            +DAL+LLV I+AL+R TS RGRYEPTFYGRLLA+  LSFDASF++LKFG+VGLL EGI+I
Sbjct: 447  EDALNLLVHIKALDR-TSARGRYEPTFYGRLLASFPLSFDASFIVLKFGDVGLLREGILI 505

Query: 1815 GILMDQQPLPIFHPFGQDFLFKKYIESYFGGDNDNMVLTGRKEIIFMGNLCAYQFWQRVF 1636
            GILMD QP PI HPFG++ LF +Y   Y+GGD +NMV  GRKE+I MGNLCAY+FWQRVF
Sbjct: 506  GILMDIQPQPILHPFGEEHLFAEYAYHYYGGDCNNMVRIGRKEMILMGNLCAYKFWQRVF 565

Query: 1635 KDKHRLERMKRLLNSDESKGTQVLLPKLEEEWCSFHNLVPSSLHHVSDIYEEILSAIHRY 1456
            KD+HRLE +KRL   DE K    LLPK+EEEWCSFHNLV SSLH VS+IYE+ILS++HR+
Sbjct: 566  KDRHRLEHLKRLSTFDEMKAVTSLLPKIEEEWCSFHNLVWSSLHQVSEIYEDILSSLHRF 625

Query: 1455 RPSFLARSTGLPSYYDPYEFEHTCFLQSLPKGATGANPADNEQLDEAIETRTCLALPFVA 1276
            RP FL +  GLP+YYDPYEF H C L+S          AD+E  + + E + C A+PFV 
Sbjct: 626  RPRFLGKCDGLPTYYDPYEFGHVCLLKSQQNEDIVVVAADDEHQEPSSEIKKCCAVPFVD 685

Query: 1275 SNHFQTGAVAEKLAAIIKEVRIQWT--------EETTANEQEIVDNSGSHLTKEVSLCRF 1120
            S HFQT  VAEKL  I+KEV    T         + + N+   V+   SH+ +E  LC +
Sbjct: 686  SGHFQTINVAEKLLTIVKEVNKLCTGNDSSYVNGDPSGNDAGYVNEDVSHVNEEAPLCVY 745

Query: 1119 FVNGLCNKGSECNFSHSLQSKRPVCRFFFSYQGCRNGESCFFSHDHGPSVPSINSSSLCL 940
            FVNG CNKGS+C+FSHSLQ+K+P CR+FF+ QGCRNGESC FSHD G SV S  S + C 
Sbjct: 746  FVNGSCNKGSQCSFSHSLQAKKPACRYFFTLQGCRNGESCSFSHDIGSSVSSC-SPAPCP 804

Query: 939  PEADQPDAASFLNLMPTTSDGCVLVLDDTELHFSSNLCHHCDPTKIISTTCVPQTSIFDN 760
            PE D  +A S L L PT+SDGC+L+L+D++LHFS N     DP+KIISTTC+ +TS+ D 
Sbjct: 805  PEDDDVNAVSLLQLFPTSSDGCILLLEDSDLHFSLNFACFYDPSKIISTTCMSETSLNDP 864

Query: 759  YLPGVRIMWGLNHPSQTILPNAGENKIPWKQVHCVLWFPKLSS-SEGFDGQRSLLQKFFE 583
             L GVRI+W    P +TI+  AG N IPW +V C+LWFP  +S SE  +GQ+ L+Q FF+
Sbjct: 865  SLNGVRILWEFRDPCRTIISKAGRNLIPWSEVKCILWFPSFASQSENLEGQKILVQNFFD 924

Query: 582  YLAIRIFGDSLYELRVILTMNNVRFSQLKVEKLARECFFFLTESFPFDESSFGAFADNVV 403
            YLA RI  DSLYELR+I+TMNNVRF+QL+VEKL RE FFFL ESFPFDE+SFG  AD V 
Sbjct: 925  YLASRIIADSLYELRIIITMNNVRFAQLQVEKLGRESFFFLGESFPFDEASFGELADGVR 984

Query: 402  AKKTMTVSRPISYVFDVHPPSDLQFGDYASKLHNCLH 292
             +K M  S+ ISYVFD+ PP+D+QF DYA+ LH CLH
Sbjct: 985  TRKPMPASKAISYVFDLQPPTDIQFDDYAATLHKCLH 1021


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score = 1298 bits (3359), Expect = 0.0
 Identities = 653/997 (65%), Positives = 779/997 (78%), Gaps = 14/997 (1%)
 Frame = -2

Query: 3240 LPVMALKDKIVEKILENRVTLIIGETGCGKSSQVPQFILQEGMEPILCTQPXXXXXXXXX 3061
            LPVMAL+ KIVEKI+ENRVTLI+GETGCGKSSQVPQF+L+E M PILCTQP         
Sbjct: 20   LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEENMAPILCTQPRRFAVVAVA 79

Query: 3060 XXXXXXRGCEVGQEVGYHIGHSKVISEGSKIVFKTAGVLLDEMRDKGIDALRYKVIILDE 2881
                  R  EVG EVGYHIGHSK++SE SKIVFKTAGVLLDEMR+KG  AL YKVIILDE
Sbjct: 80   RMVAKARNSEVGGEVGYHIGHSKLLSERSKIVFKTAGVLLDEMREKGSKALEYKVIILDE 139

Query: 2880 VHERSVESDLVLAFVKQFLLKNNDLRVVLMSATADIARYRDYFRDLGRGERVEVLAIPTS 2701
            VHERSVESDLVL  VKQF+L++ DLRVVLMSATADIARYRDYF+DLGRGERVEVLAIP S
Sbjct: 140  VHERSVESDLVLVCVKQFMLRDYDLRVVLMSATADIARYRDYFKDLGRGERVEVLAIPNS 199

Query: 2700 TQQAIFQRRVLYLEQVNEVLGMDSE--------PSGHSTEAEIKPEEHKLIHNLVLHIHE 2545
            +Q+  FQR+V YLEQV E+LG++SE        PS     A+IKPE HKLIH+LVL IH+
Sbjct: 200  SQKTFFQRKVSYLEQVTELLGINSELSTRYLSGPSPSMDNADIKPEVHKLIHDLVLKIHK 259

Query: 2544 NEPDLEKSILVFLPTYYSLEQQWSLLKPFSSHFKVHILHRSIDTDQALMAMKIWKSHRKV 2365
            NE D+EKSILVFLPTY SLEQQW LLKP SS FK+HILHRSIDT+QALMAMKIWKSHRKV
Sbjct: 260  NELDIEKSILVFLPTYQSLEQQWYLLKPLSSCFKIHILHRSIDTEQALMAMKIWKSHRKV 319

Query: 2364 ILATNIAESSVTIPGVAYVIDSCRSLQVFWDNIRKKDSPELVWVSKSQAEQRKGRTGRTC 2185
            ILATNIAESSVTIP VAYVIDSCRSLQVFWD+ RKK++ EL WVSKSQAEQR+GRTGRTC
Sbjct: 320  ILATNIAESSVTIPKVAYVIDSCRSLQVFWDSNRKKEASELTWVSKSQAEQRRGRTGRTC 379

Query: 2184 DGQIYRLVSRSFFNKLNEHEQPAILRLSLRQQVLLICSAQSKAINDPKVLLQKALDPPDS 2005
            DGQ++RLV+ SFFNKL ++E PAILRLSLRQQVLLIC A+ +AINDPKVLLQKALDPPD 
Sbjct: 380  DGQVFRLVTGSFFNKLQDYEPPAILRLSLRQQVLLICCAEPRAINDPKVLLQKALDPPDP 439

Query: 2004 EVVDDALSLLVRIQALERSTSHRGRYEPTFYGRLLATLSLSFDASFLILKFGNVGLLHEG 1825
             VV+DAL  LVRI ALE+ T  RGRYEP+FYGRLLA+ SLSFDAS LILKFG++G+L EG
Sbjct: 440  VVVEDALRFLVRINALEK-TLPRGRYEPSFYGRLLASFSLSFDASVLILKFGDIGMLREG 498

Query: 1824 IVIGILMDQQPLPIFHPFGQDFLFKKYIESYFGGDNDNMVLTGRKEIIFMGNLCAYQFWQ 1645
            I++GILMD QPLPI HPFG++ L  +Y + YF GD+D  VLTG++E+ F+ NL A+QFWQ
Sbjct: 499  ILLGILMDIQPLPILHPFGKENLSAQYTDCYFHGDSDKSVLTGKREVAFIANLSAFQFWQ 558

Query: 1644 RVFKDKHRLERMKRLLNSDESKGTQVLLP--KLEEEWCSFHNLVPSSLHHVSDIYEEILS 1471
            RVFKDKHRLER+K++L  DE   TQ  LP  K+EEEWC+FH LV SSL+HVS+IYE++L+
Sbjct: 559  RVFKDKHRLERLKKILKLDEMDTTQKQLPLAKIEEEWCTFHMLVQSSLNHVSEIYEDVLN 618

Query: 1470 AIHRYRPSFLARSTGLPSYYDPYEFEHTCFLQSLPKGATGANPADNEQLDEAIETRTCLA 1291
            ++HR+RP FL +S G PSYY+PYEFEHTC +  LP G T     D++Q +   E R CLA
Sbjct: 619  SVHRFRPKFLVKSDGPPSYYEPYEFEHTCLITQLPDGDT-----DDDQFEPPSEARKCLA 673

Query: 1290 LPFVASNHFQTGAVAEKLAAIIKEVRIQWTEETTANEQEIVDNSGSHLTKEVSLCRFFVN 1111
            +PFV+ N FQ   +AEK+A +IKE+R+Q+TE+ ++N+ ++V++       + S CRFFVN
Sbjct: 674  VPFVSPNQFQNDIIAEKMALVIKEIRVQYTEKNSSNQHKVVNDG------KASPCRFFVN 727

Query: 1110 GLCNKGSECNFSHSL---QSKRPVCRFFFSYQGCRNGESCFFSHDHGPSVPSINSSSLCL 940
            G CN+G++C FSHSL   + K P C+FFFS QGCRNG+SCFFSHD  PSV   + S  CL
Sbjct: 728  GSCNRGNKCPFSHSLPVNEVKGPTCKFFFSLQGCRNGDSCFFSHDLDPSVSEFSGSGECL 787

Query: 939  PEADQPDAASFLNLMPTTSDGCVLVLDDTELHFSSNLCHHCDPTKIISTTCVPQTSIFDN 760
            PE    DA   L   P    G VLVLDDT+LHF+ NL H  +P KIISTTC+P  SI D 
Sbjct: 788  PEDGDADAVLLLQFFPNALGGRVLVLDDTDLHFTINLAHKFNPFKIISTTCLPNISICDP 847

Query: 759  YLPGVRIMWGLNHPSQTILPNAGENKIPWKQVHCVLWFPKLSSSEG-FDGQRSLLQKFFE 583
             L  V+I+WGL  P + I+   GEN IPW +V C+LWFP   S  G  +GQ++L+QKFFE
Sbjct: 848  SLTAVKILWGLREPYKAIISTEGENPIPWNEVECILWFPNFESYGGNLEGQKNLIQKFFE 907

Query: 582  YLAIRIFGDSLYELRVILTMNNVRFSQLKVEKLARECFFFLTESFPFDESSFGAFADNVV 403
             LA+RI  D++Y+++VILTM N+RFSQL+VEKL R+CFFFL  SFPFDESSFG   D V 
Sbjct: 908  CLAVRILADAMYQVQVILTMKNIRFSQLQVEKLGRDCFFFLKCSFPFDESSFGELTDKVT 967

Query: 402  AKKTMTVSRPISYVFDVHPPSDLQFGDYASKLHNCLH 292
             KK M VSR  SYVF++ PP+D+ FGDYA+  +  LH
Sbjct: 968  TKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLH 1004


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
            vinifera]
          Length = 1014

 Score = 1289 bits (3335), Expect = 0.0
 Identities = 653/1004 (65%), Positives = 778/1004 (77%), Gaps = 21/1004 (2%)
 Frame = -2

Query: 3240 LPVMALKDKIVEKILENRVTLIIGETGCGKSSQVPQFILQEGMEPILCTQPXXXXXXXXX 3061
            LPVMAL+ KIVEKI+ENRVTLI+GETGCGKSSQVPQF+L+E M PILCTQP         
Sbjct: 20   LPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEENMAPILCTQPRRFAVVAVA 79

Query: 3060 XXXXXXRGCEVGQEVGYHIGHSKVISEGSKIVFKTAGVLLDEMRDKGIDALRYKVIILDE 2881
                  R  EVG EVGYHIGHSK++SE SKIVFKTAGVLLDEMR+KG  AL YKVIILDE
Sbjct: 80   RMVAKARNSEVGGEVGYHIGHSKLLSERSKIVFKTAGVLLDEMREKGSKALEYKVIILDE 139

Query: 2880 VHERSVESDLVLAFVKQFLLKNNDLRVVLMSATADIARYRDYFRDLGRGERVEVLAIPTS 2701
            VHERSVESDLVL  VKQF+L++ DLRVVLMSATADIARYRDYF+DLGRGERVEVLAIP S
Sbjct: 140  VHERSVESDLVLVCVKQFMLRDYDLRVVLMSATADIARYRDYFKDLGRGERVEVLAIPNS 199

Query: 2700 TQQAIFQRRVLYLEQVNEVLGMDSE--------PSGHSTEAEIKPEEHKLIHNLVLHIHE 2545
            +Q+  FQR+V YLEQV E+LG++SE        PS     A+IKPE HKLIH+LVL IH+
Sbjct: 200  SQKTFFQRKVSYLEQVTELLGINSELSTRYLSGPSPSMDNADIKPEVHKLIHDLVLKIHK 259

Query: 2544 NEPDLEKSILVFLPTYYSLEQQWSLLKPFSSHFKVHILHRSIDTDQALMAMKIWKSHRKV 2365
            NE D+EKSILVFLPTY SLEQQW LLKP SS FK+HILHRSIDT+QALMAMKIWKSHRKV
Sbjct: 260  NELDIEKSILVFLPTYQSLEQQWYLLKPLSSCFKIHILHRSIDTEQALMAMKIWKSHRKV 319

Query: 2364 ILATNIAESSVTIPGVAYVIDSCRSLQVFWDNIRKKDSPELVWVSKSQAEQRKGRTGRTC 2185
            ILATNIAESSVTIP VAYVIDSCRSLQVFWD+ RKK++ EL WVSKSQAEQR+GRTGRTC
Sbjct: 320  ILATNIAESSVTIPKVAYVIDSCRSLQVFWDSNRKKEASELTWVSKSQAEQRRGRTGRTC 379

Query: 2184 DGQIYRLVSRSFFNKLNEHEQPAILRLSLRQQVLLICSAQSKAINDPKVLLQKALDPPDS 2005
            DGQ++RLV+ SFFNKL ++E PAILRLSLRQQVLLIC A+ +AINDPKVLLQKALDPPD 
Sbjct: 380  DGQVFRLVTGSFFNKLQDYEPPAILRLSLRQQVLLICCAEPRAINDPKVLLQKALDPPDP 439

Query: 2004 EVVDDALSLLVRIQALERSTSHRGRYEPTFYGRLLATLSLSFDASFLILKFGNVGLLHEG 1825
             VV+DAL  LVRI ALE+ T  RGRYEP+FYGRLLA+ SLSFDAS LILKFG++G+L EG
Sbjct: 440  VVVEDALRFLVRINALEK-TLPRGRYEPSFYGRLLASFSLSFDASVLILKFGDIGMLREG 498

Query: 1824 IVIGILMDQQPLPIFHPFGQDFLFKKYIESYFGGDNDNMVLTGRKEIIFMGNLCAYQFWQ 1645
            I++GILMD QPLPI HPFG++ L  +Y + YF GD+D  VLTG++E+ F+ NL A+QFWQ
Sbjct: 499  ILLGILMDIQPLPILHPFGKENLSAQYTDCYFHGDSDKSVLTGKREVAFIANLSAFQFWQ 558

Query: 1644 RVFKDKHRLERMKRLLNSDESKGTQVLLP--KLEEEWCSFHNLVPSSLHHVSDIYEEILS 1471
            RVFKDKHRLER+K++L  DE   TQ  LP  K+EEEWC+FH LV SSL+HVS+IYE++L+
Sbjct: 559  RVFKDKHRLERLKKILKLDEMDTTQKQLPLAKIEEEWCTFHMLVQSSLNHVSEIYEDVLN 618

Query: 1470 AIHRYRPSFLARSTGLPSYYDPYEFEHTCFLQSLPKGATGANPADNEQLDEAIETRTCLA 1291
            ++HR+RP FL +S G PSYY+PYEFEHTC +  LP G T     D++Q +   E R CLA
Sbjct: 619  SVHRFRPKFLVKSDGPPSYYEPYEFEHTCLITQLPDGDT-----DDDQFEPPSEARKCLA 673

Query: 1290 LPFVASNHFQTGAVAEKLAAIIKEVR-------IQWTEETTANEQEIVDNSGSHLTKEVS 1132
            +PFV+ N FQ   +AEK+A +IKEV        +Q+TE+ ++N+ ++V++       + S
Sbjct: 674  VPFVSPNQFQNDIIAEKMALVIKEVLLSCASLVVQYTEKNSSNQHKVVNDG------KAS 727

Query: 1131 LCRFFVNGLCNKGSECNFSHSL---QSKRPVCRFFFSYQGCRNGESCFFSHDHGPSVPSI 961
             CRFFVNG CN+G++C FSHSL   + K P C+FFFS QGCRNG+SCFFSHD  PSV   
Sbjct: 728  PCRFFVNGSCNRGNKCPFSHSLPVNEVKGPTCKFFFSLQGCRNGDSCFFSHDLDPSVSEF 787

Query: 960  NSSSLCLPEADQPDAASFLNLMPTTSDGCVLVLDDTELHFSSNLCHHCDPTKIISTTCVP 781
            + S  CLPE    DA   L   P    G VLVLDDT+LHF+ NL H  +P KIISTTC+P
Sbjct: 788  SGSGECLPEDGDADAVLLLQFFPNALGGRVLVLDDTDLHFTINLAHKFNPFKIISTTCLP 847

Query: 780  QTSIFDNYLPGVRIMWGLNHPSQTILPNAGENKIPWKQVHCVLWFPKLSSSEG-FDGQRS 604
              SI D  L  V+I+WGL  P + I+   GEN IPW +V C+LWFP   S  G  +GQ++
Sbjct: 848  NISICDPSLTAVKILWGLREPYKAIISTEGENPIPWNEVECILWFPNFESYGGNLEGQKN 907

Query: 603  LLQKFFEYLAIRIFGDSLYELRVILTMNNVRFSQLKVEKLARECFFFLTESFPFDESSFG 424
            L+QKFFE LA+RI  D++Y+++VILTM N+RFSQL+VEKL R+CFFFL  SFPFDESSFG
Sbjct: 908  LIQKFFECLAVRILADAMYQVQVILTMKNIRFSQLQVEKLGRDCFFFLKCSFPFDESSFG 967

Query: 423  AFADNVVAKKTMTVSRPISYVFDVHPPSDLQFGDYASKLHNCLH 292
               D V  KK M VSR  SYVF++ PP+D+ FGDYA+  +  LH
Sbjct: 968  ELTDKVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLH 1011


>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355480579|gb|AES61782.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 1035

 Score = 1212 bits (3136), Expect = 0.0
 Identities = 617/1009 (61%), Positives = 752/1009 (74%), Gaps = 25/1009 (2%)
 Frame = -2

Query: 3240 LPVMALKDKIVEKILENRVTLIIGETGCGKSSQVPQFILQEGMEPILCTQPXXXXXXXXX 3061
            LPVM+++ KI++KI +NRVTLIIGETGCGKSSQ+PQF+L+E M PILCT P         
Sbjct: 30   LPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTPILCTLPRRFAVVSVA 89

Query: 3060 XXXXXXRGCEVGQEVGYHIGHSKVISEGSKIVFKTAGVLLDEMRDKGIDALRYKVIILDE 2881
                  R C++G+EVGYHIGHS+  S  S+IVFKTAGVLLDEM++KG+ AL+YKVIILDE
Sbjct: 90   KMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQEKGLTALKYKVIILDE 149

Query: 2880 VHERSVESDLVLAFVKQFLLKNNDLRVVLMSATADIARYRDYFRDLGRGERVEVLAIPTS 2701
            VHERSVESDLVL  VKQFLLKNNDLRVVLMSATADI+RYRDYFRDLGRGERVEVLAIP+S
Sbjct: 150  VHERSVESDLVLVCVKQFLLKNNDLRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSS 209

Query: 2700 TQQAIFQRRVLYLEQ-----------VNEVLGMDSEPSGHS----------TEAEIKPEE 2584
             Q  +FQR V YL+Q           V E LG+ SE   HS          + A IK E 
Sbjct: 210  NQNMLFQRSVSYLDQALIMVLIFFSQVAETLGITSEIM-HSKYSSCLNPSISNAYIKSEL 268

Query: 2583 HKLIHNLVLHIHENEPDLEKSILVFLPTYYSLEQQWSLLKPFSSHFKVHILHRSIDTDQA 2404
            H LIH LVLHIHENEPD+EKSILVFLPTYYSLEQQW LLKP  S F+VHILH SIDT+QA
Sbjct: 269  HSLIHELVLHIHENEPDIEKSILVFLPTYYSLEQQWRLLKPLESTFRVHILHGSIDTEQA 328

Query: 2403 LMAMKIWKSHRKV--ILATNIAESSVTIPGVAYVIDSCRSLQVFWDNIRKKDSPELVWVS 2230
            LM MKIWKSHRKV  ILATNIAESSVTIP VAYVIDSCRSLQV+WD  RKKD   LVWVS
Sbjct: 329  LMTMKIWKSHRKVVVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKDCSALVWVS 388

Query: 2229 KSQAEQRKGRTGRTCDGQIYRLVSRSFFNKLNEHEQPAILRLSLRQQVLLICSAQSKAIN 2050
            KSQA+QR GRTGRTCDGQ+YRLV  SF+N L +HE P IL+LSLR Q+L  C A SKAIN
Sbjct: 389  KSQAKQRSGRTGRTCDGQVYRLVPGSFYNDLEDHETPVILKLSLRLQILSSCCAGSKAIN 448

Query: 2049 DPKVLLQKALDPPDSEVVDDALSLLVRIQALERSTSHRGRYEPTFYGRLLATLSLSFDAS 1870
            DPKVLLQKALDPPD ++V+DALSLLV++ ALE+ T  RGRYEPTFYGRLLA+ SLSFD+S
Sbjct: 449  DPKVLLQKALDPPDPQIVEDALSLLVQMGALEK-TPTRGRYEPTFYGRLLASFSLSFDSS 507

Query: 1869 FLILKFGNVGLLHEGIVIGILMDQQPLPIFHPFGQDFLFKKYIESYFGGDNDNMVLTGRK 1690
             L+LKFG++G++ EGI++GI+MD QPLPI HPFG+D LF KYI+ Y+G   D  +L GRK
Sbjct: 508  VLVLKFGDIGMIREGILLGIMMDTQPLPIIHPFGEDELFAKYIDCYYG---DRTILAGRK 564

Query: 1689 EIIFMGNLCAYQFWQRVFKDKHRLERMKRLLNSDESKGTQVLLPKLEEEWCSFHNLVPSS 1510
            E+ FM N CA+QFWQ +FKDK+RLE +K++L SD+      L+ KLEE+WC FHNL  SS
Sbjct: 565  EMEFMANFCAFQFWQHIFKDKYRLEHLKQVLKSDDVYPDTHLMLKLEEDWCFFHNLYQSS 624

Query: 1509 LHHVSDIYEEILSAIHRYRPSFLARSTGLPSYYDPYEFEHTCFLQSLPKGATGANPADNE 1330
            LH +S+IY +IL  IHR+RP FL+   GL  YYDPYEF HTC  +S P G +     D E
Sbjct: 625  LHQMSEIYNDILYTIHRFRPKFLSSFHGLVPYYDPYEFSHTCLFKSQPDGHSDVVSVDEE 684

Query: 1329 QLDEAIETRTCLALPFVASNHFQTGAVAEKLAAIIKEVRIQWTEETTANEQEIVDNSGSH 1150
              + + +T+ C+A+P+V  NH  +  VA+  AAI+KE R Q+ ++++++  E  D    H
Sbjct: 685  GFEPSNQTKKCVAVPYVTLNHLNSYEVAKMFAAIVKETRAQYPDDSSSHPPEDADVGNFH 744

Query: 1149 LTKEVSLCRFFVNGLCNKGSECNFSHSLQSKRPVCRFFFSYQGCRNGESCFFSHD-HGPS 973
            +  EVS C +F+ G C++G+ C+FSH+LQ+KRP C+FFFS QGCRNG SC FSHD   P+
Sbjct: 745  VYGEVSPCVYFMRGSCSRGNSCSFSHTLQAKRPQCKFFFSLQGCRNGGSCLFSHDVDRPA 804

Query: 972  VPSINSSSLCLPEADQPDAASFLNLMPTTSDGCVLVLDDTELHFSSNLCHHCDPTKIIST 793
            V +    ++C PE +  ++AS LNL P +S+  +L+LDDT+LHFSS    H DP+KIIST
Sbjct: 805  VSA--RKNICRPEDNAMNSASLLNLFPKSSNRSILILDDTDLHFSSCFACHYDPSKIIST 862

Query: 792  TCVPQTSIFDNYLPGVRIMWGLNHPSQTILPNAGENKIPWKQVHCVLWFPKLSS-SEGFD 616
            T + +T+  +  L GVRI+WGL HP QTI+  AG + IPW +V CVLWFP   S  E  D
Sbjct: 863  TSLSETTFTEPSLTGVRILWGLYHPYQTIIAKAGRSLIPWNEVQCVLWFPCFDSYGEDLD 922

Query: 615  GQRSLLQKFFEYLAIRIFGDSLYELRVILTMNNVRFSQLKVEKLARECFFFLTESFPFDE 436
            G++  LQ FF+YLA RI  D L E++VI+TMNN+RFSQL+VEKLAR+CFF LTESF FDE
Sbjct: 923  GKKKALQNFFQYLAFRILADDLQEVQVIITMNNIRFSQLQVEKLARDCFFILTESFAFDE 982

Query: 435  SSFGAFADNVVAKKTMTVSRPISYVFDVHPPSDLQFGDYASKLHNCLHK 289
             SFG   D+V  ++ M VSR ISYVF + PP+D   GDY + +   LHK
Sbjct: 983  ISFGILHDSVTNRRPMVVSRSISYVFSLQPPTDELCGDYVATMKRHLHK 1031


>ref|XP_002882127.1| zinc finger helicase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297327966|gb|EFH58386.1| zinc finger helicase
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score = 1203 bits (3113), Expect = 0.0
 Identities = 595/992 (59%), Positives = 746/992 (75%), Gaps = 9/992 (0%)
 Frame = -2

Query: 3240 LPVMALKDKIVEKILENRVTLIIGETGCGKSSQVPQFILQEGMEPILCTQPXXXXXXXXX 3061
            LP+MA+K +I++KILENRVTLI+GE GCGKSSQVPQF+L+  M PILCTQP         
Sbjct: 26   LPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAPILCTQPRRFAVVAVA 85

Query: 3060 XXXXXXRGCEVGQEVGYHIGHSKVISEGSKIVFKTAGVLLDEMRDKGIDALRYKVIILDE 2881
                  R  ++G E+GYHIGHSK+++EGSKI+FKTAGVLLDEM DKG++AL+YKVIILDE
Sbjct: 86   KMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALQYKVIILDE 145

Query: 2880 VHERSVESDLVLAFVKQFLLKNNDLRVVLMSATADIARYRDYFRDLGRGERVEVLAIPTS 2701
            VHERSVESDLVL  VKQFL+KNNDLRVVLMSATADI RYRDYF++LGRGERVEV+AIP+ 
Sbjct: 146  VHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVVAIPSP 205

Query: 2700 TQQAIFQRRVLYLEQVNEVLGMDSE-------PSGHSTEAEIKPEEHKLIHNLVLHIHEN 2542
             Q+ IFQRRVLYLEQV  +LGM S+       PS  S +AEIKPE   LIH+L+L+IHE 
Sbjct: 206  DQRTIFQRRVLYLEQVAGLLGMSSDFSAYCPGPSPSSADAEIKPELQNLIHDLILYIHEK 265

Query: 2541 EPDLEKSILVFLPTYYSLEQQWSLLKPFSSHFKVHILHRSIDTDQALMAMKIWKSHRKVI 2362
            EPD+EKSILVFLPTYYSLEQQW  L+PF + F+VHILHRSIDT+QAL AMKI +S RKVI
Sbjct: 266  EPDIEKSILVFLPTYYSLEQQWHQLEPFRASFEVHILHRSIDTEQALAAMKICRSRRKVI 325

Query: 2361 LATNIAESSVTIPGVAYVIDSCRSLQVFWDNIRKKDSPELVWVSKSQAEQRKGRTGRTCD 2182
            LATNIAESSVTIP VAYVIDSCRSLQVFWD  RK+D+ +L WVS+SQAEQR+GRTGRTCD
Sbjct: 326  LATNIAESSVTIPKVAYVIDSCRSLQVFWDASRKRDAVQLDWVSRSQAEQRRGRTGRTCD 385

Query: 2181 GQIYRLVSRSFFNKLNEHEQPAILRLSLRQQVLLICSAQSKAINDPKVLLQKALDPPDSE 2002
            G++YRLV  +FFNKL EHE PAIL+LSLRQQVL IC  +S+AIND  VLL KA+DPPD  
Sbjct: 386  GEVYRLVPSAFFNKLEEHEPPAILKLSLRQQVLHICCTESRAINDANVLLAKAMDPPDPN 445

Query: 2001 VVDDALSLLVRIQALERSTSHRGRYEPTFYGRLLATLSLSFDASFLILKFGNVGLLHEGI 1822
            V+DDAL +L+ I+AL +S   RGRYEPTFYGRLLA+  LSFDA  L++KFG +G+L EGI
Sbjct: 446  VIDDALKMLLSIRALRKSP--RGRYEPTFYGRLLASFPLSFDACILVVKFGEMGMLREGI 503

Query: 1821 VIGILMDQQPLPIFHPFGQDFLFKKYIESYFGGDNDNMVLTGRKEIIFMGNLCAYQFWQR 1642
            ++G+LMD QPLPI HPFG D LF +Y++ YFGG     + +GR+E++ M N CA+QFWQR
Sbjct: 504  LLGVLMDTQPLPIHHPFGDDSLFLEYLDHYFGG--SKTICSGRREMVLMANFCAFQFWQR 561

Query: 1641 VFKDKHRLERMKRLLNSDESKGTQVLLPKLEEEWCSFHNLVPSSLHHVSDIYEEILSAIH 1462
            VFKDKHRLE +K+LL  ++ K  +++ P++E+EWC FHN++ SS +HVS++YE+ LS+ H
Sbjct: 562  VFKDKHRLENLKQLLAKEKDKDLKLMFPEIEKEWCDFHNILQSSFYHVSEMYEDTLSSFH 621

Query: 1461 RYRPSFLARSTGLPSYYDPYEFEHTCFLQSLPKGATGANPADNEQLDEAIETRTCLALPF 1282
            R+RP F++ S  LP+YY+PYEF+HTC+++         +  D +      E R C+++PF
Sbjct: 622  RFRPQFISSSDSLPTYYNPYEFDHTCYIECQLSEDKYLHSEDEDNNQPPPEVRKCVSMPF 681

Query: 1281 VASNHFQTGAVAEKLAAIIKEVRIQWTEETTANEQEIVDNSGSHLTKEVSLCRFFVNGLC 1102
            V  N FQ  AVAE +A+IIKE+R Q T   + N    ++        E  +C +F+NG C
Sbjct: 682  VPPNAFQAYAVAENMASIIKEIRTQCTPSESDNGHGAIEPEDYVEDGEAPVCVYFLNGFC 741

Query: 1101 NKGSECNFSHSLQSKRPVCRFFFSYQGCRNGESCFFSHDHGPSVPSINSSSLCLPEADQP 922
            N+G +C FSH+LQS  P C+FF S QGCRNGESC FSH       S      CL E D  
Sbjct: 742  NRGDQCTFSHTLQSTGPACKFFASLQGCRNGESCLFSHVMRRRATSYRLPPQCLAEEDGS 801

Query: 921  DAASFLNLMPTTSDGCVLVLDDTELHFSSNLCHHCDPTKIISTTCVPQTSIFDNYLPGVR 742
              +  L+L PT+S+GC+LV DD+ + F+S++ +     +I++T+    T + D+ L   R
Sbjct: 802  STSPLLDLFPTSSEGCILVFDDSAMRFTSSIANCYPSWRILATSSSSDTLLCDSSLANTR 861

Query: 741  IMWGLNHPSQTILPNA-GENKIPWKQVHCVLWFPKLSS-SEGFDGQRSLLQKFFEYLAIR 568
            I WGLNHP QTI+  A GEN IPW +V CVLWF    S ++  +GQ+++LQ FFEY+AIR
Sbjct: 862  IFWGLNHPYQTIISKAGGENPIPWSEVKCVLWFLNPDSYADTPEGQKTILQNFFEYMAIR 921

Query: 567  IFGDSLYELRVILTMNNVRFSQLKVEKLARECFFFLTESFPFDESSFGAFADNVVAKKTM 388
            + GD+LYE+RVILTMNNVRFS L+VEKLAR+ FFFL ESFP +  SFG F D +  +K M
Sbjct: 922  LLGDNLYEIRVILTMNNVRFSLLQVEKLARDSFFFLGESFPHNSVSFGEFQDTLTIQKPM 981

Query: 387  TVSRPISYVFDVHPPSDLQFGDYASKLHNCLH 292
             VSRPISYVF++H PSD+QFGDY S LH  LH
Sbjct: 982  QVSRPISYVFNLHSPSDIQFGDYTSLLHKSLH 1013