BLASTX nr result
ID: Cimicifuga21_contig00007152
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007152
(1634 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 788 0.0
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 750 0.0
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 749 0.0
ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|2... 729 0.0
ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 721 0.0
>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
Length = 635
Score = 788 bits (2035), Expect = 0.0
Identities = 408/543 (75%), Positives = 463/543 (85%), Gaps = 7/543 (1%)
Frame = -3
Query: 1629 MVGCGRTLLSLSFSTNVLSHSLFSATKRYPFRKTS-SSTLRFFQGFKPLCSIATAPTSTI 1453
M G GRTL+ LS S+N+ S SL S + R P K + +T R F GFKP+ S +++ ++T
Sbjct: 1 MGGTGRTLVGLSLSSNLFSFSLLSPSMRRPLYKLAIPTTTRVFLGFKPI-SCSSSSSTTA 59
Query: 1452 LDEDHALEPMRHSILLERLRSRHLKDSSKAQPNR-PPSARGNEKLLQDEKLSKSRTPHRV 1276
++ D AL+PMRHSILLE+LR RHLKDS+K+ R PP + G ++ + KS+ ++
Sbjct: 60 IEADQALQPMRHSILLEKLRFRHLKDSAKSPQTRSPPLSTGGKE--GEPGSMKSQKKPKM 117
Query: 1275 FSSFGELGLDEEVMGAVQELGISVPTEIQGVGIPEVLEGKSVVLGSHTGSGKTLAYMLPL 1096
SSF ELGL EEVM AV+E GISVPTEIQ +G+P VLEG+SVVLGSHTGSGKTLAYMLPL
Sbjct: 118 VSSFEELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPL 177
Query: 1095 VQLLRRDETLSGMMMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLR 916
VQLLRRDE LSG++MKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLR
Sbjct: 178 VQLLRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLR 237
Query: 915 PQEDSLNAPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLAP 736
PQEDSLN PIDMVVGTPGRVLQHIEEGN+VYG+IKY+VLDEADTMFDRGFGPDIRKFLAP
Sbjct: 238 PQEDSLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAP 297
Query: 735 LKNRALKSHDQGFQTILVTATMTKAVQTLVDEEFEGIIHLRTSTLHKKIASARHDFIAIK 556
LKNRA KS DQGFQT+LVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFI +
Sbjct: 298 LKNRASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 357
Query: 555 GDENKLDSLLQILEPSLSKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRV 376
G ENKL++LLQ+LEPSL+KGN+VMVFCNTLNSSRAVDHFLGENQI TVNYHGEVPAEQRV
Sbjct: 358 GSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRV 417
Query: 375 ENLKKFKSEAGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 196
ENLKKFK+E GDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 418 ENLKKFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 477
Query: 195 VTSLVAKKDTTLANRIEEAIRKNESLESISVDNVRSGPSRPRVA-----GRGTARVSNQK 31
VTSLVAKKD LA RIEEAIRKNESLE+++ DN+R +R +++ +VS QK
Sbjct: 478 VTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQK 537
Query: 30 NNS 22
N +
Sbjct: 538 NKT 540
>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
sativus]
Length = 634
Score = 750 bits (1937), Expect = 0.0
Identities = 395/547 (72%), Positives = 445/547 (81%), Gaps = 4/547 (0%)
Frame = -3
Query: 1629 MVGCGRTLLSLSFSTNVLSHSLFSATKRYPFRKTSSSTLRFFQGFKPLCSIATAPTSTIL 1450
M G GRTLLSLS STN+L S S K P K R F GF+PL S A TST
Sbjct: 1 MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKP-FRNFSGFRPLSSATAATTSTES 59
Query: 1449 DED-HALEPMRHSILLERLRSRHLKDSS-KAQPNRPPSARGNEKLLQDEKLSKSRTPHRV 1276
E +EP++HS LLERLR+RHLK+S+ K +P R ++ +DE + ++
Sbjct: 60 TETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSA-EDEMKKSEKKKKKL 118
Query: 1275 FSSFGELGLDEEVMGAVQELGISVPTEIQGVGIPEVLEGKSVVLGSHTGSGKTLAYMLPL 1096
SF ELGL+EEVMGAV+E+GI VP+EIQ +GIP VLEGKSV+LGSHTGSGKTLAY+LPL
Sbjct: 119 DESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 178
Query: 1095 VQLLRRDETLSGMMMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLR 916
VQLLRRDE L G +MKPRRPRAVVLCPTRELSEQVFRV+KSISHHARFRSTMVSGGGRLR
Sbjct: 179 VQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 238
Query: 915 PQEDSLNAPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLAP 736
PQEDSL+ PIDMVVGTPGRVLQHIE GN+VYGDIKY+VLDEADTMFD GFGPDIRKF+ P
Sbjct: 239 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 298
Query: 735 LKNRALKSHDQGFQTILVTATMTKAVQTLVDEEFEGIIHLRTSTLHKKIASARHDFIAIK 556
LK+RA DQGFQTILVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFI +
Sbjct: 299 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 358
Query: 555 GDENKLDSLLQILEPSLSKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRV 376
G ENKL++LLQ+LEPSL+KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPA++RV
Sbjct: 359 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRV 418
Query: 375 ENLKKFKSEAGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 196
ENLKKFKS+ DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK
Sbjct: 419 ENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 478
Query: 195 VTSLVAKKDTTLANRIEEAIRKNESLESISVDNVRSGPSRPRVAGRGT--ARVSNQKNNS 22
VTSLV KKD LA RIEEAIRKNESLES++ D+V +R R+ T A++
Sbjct: 479 VTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGR 538
Query: 21 ASARPST 1
+ A+ +T
Sbjct: 539 SGAKSAT 545
>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
sativus]
Length = 634
Score = 749 bits (1935), Expect = 0.0
Identities = 394/547 (72%), Positives = 445/547 (81%), Gaps = 4/547 (0%)
Frame = -3
Query: 1629 MVGCGRTLLSLSFSTNVLSHSLFSATKRYPFRKTSSSTLRFFQGFKPLCSIATAPTSTIL 1450
M G GRTLLSLS STN+L S S K P K R F GF+P+ S A TST
Sbjct: 1 MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKP-FRNFSGFRPISSATAATTSTES 59
Query: 1449 DED-HALEPMRHSILLERLRSRHLKDSS-KAQPNRPPSARGNEKLLQDEKLSKSRTPHRV 1276
E +EP++HS LLERLR+RHLK+S+ K +P R ++ +DE + ++
Sbjct: 60 TETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSA-EDEMKKSEKKKKKL 118
Query: 1275 FSSFGELGLDEEVMGAVQELGISVPTEIQGVGIPEVLEGKSVVLGSHTGSGKTLAYMLPL 1096
SF ELGL+EEVMGAV+E+GI VP+EIQ +GIP VLEGKSV+LGSHTGSGKTLAY+LPL
Sbjct: 119 DESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 178
Query: 1095 VQLLRRDETLSGMMMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLR 916
VQLLRRDE L G +MKPRRPRAVVLCPTRELSEQVFRV+KSISHHARFRSTMVSGGGRLR
Sbjct: 179 VQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 238
Query: 915 PQEDSLNAPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLAP 736
PQEDSL+ PIDMVVGTPGRVLQHIE GN+VYGDIKY+VLDEADTMFD GFGPDIRKF+ P
Sbjct: 239 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 298
Query: 735 LKNRALKSHDQGFQTILVTATMTKAVQTLVDEEFEGIIHLRTSTLHKKIASARHDFIAIK 556
LK+RA DQGFQTILVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFI +
Sbjct: 299 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 358
Query: 555 GDENKLDSLLQILEPSLSKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRV 376
G ENKL++LLQ+LEPSL+KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPA++RV
Sbjct: 359 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRV 418
Query: 375 ENLKKFKSEAGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 196
ENLKKFKS+ DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK
Sbjct: 419 ENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 478
Query: 195 VTSLVAKKDTTLANRIEEAIRKNESLESISVDNVRSGPSRPRVAGRGT--ARVSNQKNNS 22
VTSLV KKD LA RIEEAIRKNESLES++ D+V +R R+ T A++
Sbjct: 479 VTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGR 538
Query: 21 ASARPST 1
+ A+ +T
Sbjct: 539 SGAKSAT 545
>ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|222856972|gb|EEE94519.1|
predicted protein [Populus trichocarpa]
Length = 573
Score = 729 bits (1881), Expect = 0.0
Identities = 384/543 (70%), Positives = 438/543 (80%), Gaps = 14/543 (2%)
Frame = -3
Query: 1608 LLSLSFSTNVLSHSLFSATKRY-PFRKTSSSTLRFFQGF--KPLCSIATAPTSTILDEDH 1438
+ + S S +L+ SL S+TK Y F K R GF +PLC++++ +T DE
Sbjct: 1 MAAASSSRTLLNLSLSSSTKLYHTFLKLPKKPSRVLLGFNFRPLCTLSSTTAATERDE-- 58
Query: 1437 ALEPMRHSILLERLRSRHLKDSSKAQPNRPPSARGNEKLL------QDEKLSKSRTPHRV 1276
++HSILLERLR RHLK S K Q + + ++ +++ KS+ ++
Sbjct: 59 ----VKHSILLERLRLRHLKGSKKPQLTDTQTQTALKPVVLIEGEEEEDGFKKSKKGKKI 114
Query: 1275 FSSFGELGLDEEVMGAVQELGISVPTEIQGVGIPEVLEGKSVVLGSHTGSGKTLAYMLPL 1096
SF ELGL EEVMGAV+E+GI VPTEIQ +GIP +L+ ++VVLGSHTGSGKTLAYMLPL
Sbjct: 115 AGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGIPAILDSRTVVLGSHTGSGKTLAYMLPL 174
Query: 1095 VQLLRRDETLSGMMMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLR 916
VQLLRRDE L G +MKPRRPRAVVLCPTRELSEQVFRVAKSI HHARFRSTMVSGGGR+R
Sbjct: 175 VQLLRRDEALLGRLMKPRRPRAVVLCPTRELSEQVFRVAKSIGHHARFRSTMVSGGGRMR 234
Query: 915 PQEDSLNAPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLAP 736
PQEDSLN PIDMVVGTPGRVLQHI++GN+VYGDIKY+VLDEADTMFDRGFGPDI KFL P
Sbjct: 235 PQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGDIKYLVLDEADTMFDRGFGPDIHKFLGP 294
Query: 735 LKNRALKSHDQGFQTILVTATMTKAVQTLVDEEFEGIIHLRTSTLHKKIASARHDFIAIK 556
LKNR KS QGFQTILVTATMTKAVQ L+DEEF+GI HLRTSTLHKKIASARHDFI +
Sbjct: 295 LKNRTSKSDGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLS 354
Query: 555 GDENKLDSLLQILEPSLSKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRV 376
G ENKL++LLQ+LEPSL+KGNRVMVFCNTLNSSRA DHFL ENQISTVNYHGEVPAEQRV
Sbjct: 355 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRV 414
Query: 375 ENLKKFKSEAGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 196
ENL KFKS+ GDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 415 ENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 474
Query: 195 VTSLVAKKDTTLANRIEEAIRKNESLESISVDNVRSGPSRPRVA---GRGT--ARVSNQK 31
VTSLVA+KD LA RIEEA+RKNESLES++VDNVR +R R+ G+ + SNQK
Sbjct: 475 VTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQGKSAKLIKASNQK 534
Query: 30 NNS 22
+N+
Sbjct: 535 SNN 537
>ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max]
Length = 636
Score = 721 bits (1862), Expect = 0.0
Identities = 375/536 (69%), Positives = 427/536 (79%)
Frame = -3
Query: 1617 GRTLLSLSFSTNVLSHSLFSATKRYPFRKTSSSTLRFFQGFKPLCSIATAPTSTILDEDH 1438
GRTL +LS S++ L KR P K L F+ F+PLCS++ A
Sbjct: 26 GRTLFTLSLSSSSSLTRLSLIPKRVPLPKP----LPLFRRFRPLCSVSAAAPEAA----- 76
Query: 1437 ALEPMRHSILLERLRSRHLKDSSKAQPNRPPSARGNEKLLQDEKLSKSRTPHRVFSSFGE 1258
+HSILLERLRSRHL+D++KA P + ++++ + +SF E
Sbjct: 77 ---DAKHSILLERLRSRHLRDAAKAAPEPRKKEKVAAAAAAAAAAAEAKEKKKAVASFEE 133
Query: 1257 LGLDEEVMGAVQELGISVPTEIQGVGIPEVLEGKSVVLGSHTGSGKTLAYMLPLVQLLRR 1078
LGL EEVMGAV+E+GI VPTEIQ +GIP VLE KSVVLGSHTGSGKTLAY+LPL QLLRR
Sbjct: 134 LGLSEEVMGAVREMGIEVPTEIQSIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRR 193
Query: 1077 DETLSGMMMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSL 898
DE L+G+++KPRRPRAVVLCPTRELSEQVFRVAKSISHHARFR TMVSGGGRLRPQEDSL
Sbjct: 194 DEQLNGILLKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSL 253
Query: 897 NAPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLAPLKNRAL 718
N PID+VVGTPGRVLQHIEEGN+VYGDIKY+VLDEADTMFDRGFGPDIRKF+ PLKNRA
Sbjct: 254 NNPIDVVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRAS 313
Query: 717 KSHDQGFQTILVTATMTKAVQTLVDEEFEGIIHLRTSTLHKKIASARHDFIAIKGDENKL 538
K GFQTILVTATMTKAVQ L+DEEF GI+HLRTSTLHKKI+SARHDFI + G ENKL
Sbjct: 314 KPDGLGFQTILVTATMTKAVQNLIDEEFLGIVHLRTSTLHKKISSARHDFIKLAGSENKL 373
Query: 537 DSLLQILEPSLSKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLKKF 358
++LLQ+LEPSL+KGNRVMVFCNTL+SSRAVDHFLGENQIS VNYHGEVPAEQRVENL+KF
Sbjct: 374 EALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLGENQISAVNYHGEVPAEQRVENLRKF 433
Query: 357 KSEAGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVA 178
KS+ DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSLVA
Sbjct: 434 KSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVA 493
Query: 177 KKDTTLANRIEEAIRKNESLESISVDNVRSGPSRPRVAGRGTARVSNQKNNSASAR 10
KKD LA++IE+A+RKNESLE+I+ ++VR R AR NQ ++
Sbjct: 494 KKDLDLASKIEDALRKNESLEAITKESVR----------RDIARTQNQSTEKGKSK 539