BLASTX nr result

ID: Cimicifuga21_contig00007151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007151
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   292   1e-76
ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   288   2e-75
gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]                     284   3e-74
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...   283   4e-74
gb|AAY82249.1| mitochrondrial voltage-dependent anion-selective ...   282   1e-73

>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
           gi|449523227|ref|XP_004168625.1| PREDICTED:
           mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
          Length = 276

 Score =  292 bits (747), Expect = 1e-76
 Identities = 155/275 (56%), Positives = 187/275 (68%), Gaps = 6/275 (2%)
 Frame = +2

Query: 113 GLGPGLYSDIGKEIRDLLYKDFQEDQKFALTG----GITFHKYGSS--DSFLAGLKTQVK 274
           G GPGLYSDIGK  RDLLYKD+Q D KF +T     G+     G+   D FLA + TQ+K
Sbjct: 2   GKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLK 61

Query: 275 IENITTDIKVDTDSRLFATITADQPAPGLKAIVNFIAPDQNSGKVMLQYQHDNVGISTSI 454
            +NITTDIKVDT S L  TIT D+PAPGLKAI +F  PDQ SGKV LQY HD  GISTSI
Sbjct: 62  NKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSI 121

Query: 455 GLTRNPIVNFSGVVGEHFLSFGADVSFDIATQNLTKFNVGYRVINDNRITSLTLIDKGNT 634
           GLT NPIVNFSGVVG + L+ G D+SFD  T N TK N G    N + I SLTL DKG+T
Sbjct: 122 GLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTLNDKGDT 181

Query: 635 LKYSMYYVVNPRTHAAIGCDISVNIQPDTMAAKVGGQLAWNPLTMVKACVSTCGNAGVMV 814
           L  S Y+ VNP T  A+G +++ +   +     VG Q A +PLT VKA V+  G A  ++
Sbjct: 182 LSASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFGKASALI 241

Query: 815 QHEFQPKSLFTISGEFNVRDIEKGYRIGLALALKP 919
           QHE++PKS FT+SGE + + IEK  ++GLALALKP
Sbjct: 242 QHEWRPKSFFTVSGEVDTKAIEKSAKVGLALALKP 276


>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 1 [Vitis vinifera]
          Length = 276

 Score =  288 bits (736), Expect = 2e-75
 Identities = 152/275 (55%), Positives = 189/275 (68%), Gaps = 6/275 (2%)
 Frame = +2

Query: 113 GLGPGLYSDIGKEIRDLLYKDFQEDQKFALT----GGITFHKYGSS--DSFLAGLKTQVK 274
           G GPGLYSDIGK  RDLLY+D+Q D KF +T     G+     G+   + F+A + TQ+K
Sbjct: 2   GKGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQLK 61

Query: 275 IENITTDIKVDTDSRLFATITADQPAPGLKAIVNFIAPDQNSGKVMLQYQHDNVGISTSI 454
            +NITTD+KVDT+S LF TIT D+PAPGLK I +FI PDQ SGKV LQY H+  GISTSI
Sbjct: 62  NKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSI 121

Query: 455 GLTRNPIVNFSGVVGEHFLSFGADVSFDIATQNLTKFNVGYRVINDNRITSLTLIDKGNT 634
           GLT NPIVNFSGVVG + LS G D+SFD AT N TK N G    N + I +LTL DKG+T
Sbjct: 122 GLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDT 181

Query: 635 LKYSMYYVVNPRTHAAIGCDISVNIQPDTMAAKVGGQLAWNPLTMVKACVSTCGNAGVMV 814
           L  S Y+ V+P T+ A+G ++S     +     +G Q A +PLT VKA  +  G    ++
Sbjct: 182 LNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSALI 241

Query: 815 QHEFQPKSLFTISGEFNVRDIEKGYRIGLALALKP 919
           QHE++PKSLFTISGE + R +EK  +IGLALALKP
Sbjct: 242 QHEWRPKSLFTISGEVDARAVEKSAKIGLALALKP 276


>gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
          Length = 276

 Score =  284 bits (726), Expect = 3e-74
 Identities = 150/273 (54%), Positives = 187/273 (68%), Gaps = 6/273 (2%)
 Frame = +2

Query: 119 GPGLYSDIGKEIRDLLYKDFQEDQKFALTG----GITFHKYG--SSDSFLAGLKTQVKIE 280
           GPGLY DIGK+ RDLLYKD+Q D KF +T     G+     G    D +L  + TQ+K +
Sbjct: 4   GPGLYLDIGKKARDLLYKDYQSDHKFTVTTYTSTGVAISSTGIRKGDLYLGDVSTQLKNK 63

Query: 281 NITTDIKVDTDSRLFATITADQPAPGLKAIVNFIAPDQNSGKVMLQYQHDNVGISTSIGL 460
           NITTD+KVDTDS L  TIT D+PAPGLKAI +FI PDQ SGKV LQYQH+  GISTSIGL
Sbjct: 64  NITTDVKVDTDSNLRTTITIDEPAPGLKAIFSFIVPDQRSGKVELQYQHEYAGISTSIGL 123

Query: 461 TRNPIVNFSGVVGEHFLSFGADVSFDIATQNLTKFNVGYRVINDNRITSLTLIDKGNTLK 640
           T NPIVNFSGVVG + LS G D+SFD A+ N TK N G    + + I SL L DK +T+ 
Sbjct: 124 TANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLILNDKADTVT 183

Query: 641 YSMYYVVNPRTHAAIGCDISVNIQPDTMAAKVGGQLAWNPLTMVKACVSTCGNAGVMVQH 820
            S Y+ V+P T+ A+G ++S +   +  +  +G Q A +PLT VK  V+  G A  ++QH
Sbjct: 184 ASYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYGRASALIQH 243

Query: 821 EFQPKSLFTISGEFNVRDIEKGYRIGLALALKP 919
           E++PKS FTISGE + R IEK  +IGLALALKP
Sbjct: 244 EWRPKSFFTISGEVDTRAIEKSAKIGLALALKP 276


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118484777|gb|ABK94257.1| unknown
           [Populus trichocarpa] gi|222852528|gb|EEE90075.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  283 bits (725), Expect = 4e-74
 Identities = 149/275 (54%), Positives = 188/275 (68%), Gaps = 6/275 (2%)
 Frame = +2

Query: 113 GLGPGLYSDIGKEIRDLLYKDFQEDQKFALTG----GITFHKYG--SSDSFLAGLKTQVK 274
           G GPGLY DIGK+ RDLLYKD+Q D KF +T     G+     G    + FLA +  Q+K
Sbjct: 2   GKGPGLYVDIGKKARDLLYKDYQSDHKFTVTTYTSTGVALTSTGIKKGELFLADVSGQLK 61

Query: 275 IENITTDIKVDTDSRLFATITADQPAPGLKAIVNFIAPDQNSGKVMLQYQHDNVGISTSI 454
            +NITTDIKVDT+S L  TIT D+PAPGLK I +F  PDQ SGKV LQYQH+  GISTS+
Sbjct: 62  NKNITTDIKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSL 121

Query: 455 GLTRNPIVNFSGVVGEHFLSFGADVSFDIATQNLTKFNVGYRVINDNRITSLTLIDKGNT 634
           GLT NPIVNFSGV+G + +S G D+SFD AT N TK+N G    N + I SLT+ DKG+T
Sbjct: 122 GLTANPIVNFSGVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKGDT 181

Query: 635 LKYSMYYVVNPRTHAAIGCDISVNIQPDTMAAKVGGQLAWNPLTMVKACVSTCGNAGVMV 814
           L  S Y+ V P T  A+G +++ +   +     +G Q A +PLT VKA ++  G A  ++
Sbjct: 182 LTASYYHTVRPLTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASALI 241

Query: 815 QHEFQPKSLFTISGEFNVRDIEKGYRIGLALALKP 919
           QHE++PKSLFTISGE + + IEK  +IGLALALKP
Sbjct: 242 QHEWRPKSLFTISGEVDTKAIEKSAKIGLALALKP 276


>gb|AAY82249.1| mitochrondrial voltage-dependent anion-selective channel [Phaseolus
           coccineus]
          Length = 276

 Score =  282 bits (722), Expect = 1e-73
 Identities = 147/273 (53%), Positives = 188/273 (68%), Gaps = 6/273 (2%)
 Frame = +2

Query: 119 GPGLYSDIGKEIRDLLYKDFQEDQKFALTG----GITFHKYGS--SDSFLAGLKTQVKIE 280
           GPGLY+DIGK+ RDLL+KD+  DQKF +T     G+     G+   + FLA + TQ+K +
Sbjct: 4   GPGLYTDIGKKARDLLFKDYHSDQKFTVTTYSPTGVAITSSGTRKGELFLADVNTQLKNK 63

Query: 281 NITTDIKVDTDSRLFATITADQPAPGLKAIVNFIAPDQNSGKVMLQYQHDNVGISTSIGL 460
           NITTDIKVDTDS LF TIT ++PAPGLKAI NF  PDQ SGKV LQY HD  GISTS+GL
Sbjct: 64  NITTDIKVDTDSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKVELQYLHDYAGISTSVGL 123

Query: 461 TRNPIVNFSGVVGEHFLSFGADVSFDIATQNLTKFNVGYRVINDNRITSLTLIDKGNTLK 640
           T NPIVNFSGVVG + L+ GAD+SFD     LTK N G     D+ I SLTL DKG+ L 
Sbjct: 124 TANPIVNFSGVVGTNILALGADLSFDTKIGELTKSNAGLSFTKDDLIASLTLNDKGDALN 183

Query: 641 YSMYYVVNPRTHAAIGCDISVNIQPDTMAAKVGGQLAWNPLTMVKACVSTCGNAGVMVQH 820
            + Y+VVNP T+ A+G +++     +     +G Q A +PLT +KA V+  G +  ++QH
Sbjct: 184 AAYYHVVNPLTNTAVGAEVTHRFSTNENTITLGTQHALDPLTTLKARVNNFGKSSALIQH 243

Query: 821 EFQPKSLFTISGEFNVRDIEKGYRIGLALALKP 919
           E++PKS FTISGE + + IEK  ++GL+L LKP
Sbjct: 244 EWRPKSFFTISGEVDTKAIEKSAKVGLSLVLKP 276


Top