BLASTX nr result
ID: Cimicifuga21_contig00007139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007139
(2386 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 737 0.0
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 737 0.0
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2... 714 0.0
ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 709 0.0
ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicag... 705 0.0
>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
[Vitis vinifera]
Length = 828
Score = 737 bits (1902), Expect = 0.0
Identities = 381/578 (65%), Positives = 438/578 (75%), Gaps = 1/578 (0%)
Frame = +3
Query: 162 RYAPEDPTLPKPWRGLVDGNTGYLYFWNPVTNTTQYERPTASLDXXXXXXXXXXXLRSCV 341
RYAPEDPTLPKPW+GLVDG TGYLYFWNP TN TQYERP
Sbjct: 9 RYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP--------------------- 47
Query: 342 EVEHSSPEKQQPDTSNGDPKFGATDGGRTIRSCVQVDRSSPEKQPLDTSNGEAVRHDGGR 521
++P S+ +I S VQV +SS ++ N E +++ R
Sbjct: 48 ---------ERPGASSNASLAPPPKSSASISSSVQVQQSSQGQRRDHGLNEEDDKYNRAR 98
Query: 522 T-EQSMRNGGGHLNEVSANANNNGSDMHNTQSLRSSASLGANIGSAVSGDAYRRQHEITV 698
+QS R G H ++ G H S+R S G GS S ++YRR+HEITV
Sbjct: 99 NLQQSARGGTVHSHDPPNGIVGAG---HGGSSVRGQGSSGP--GSGASTESYRRRHEITV 153
Query: 699 IGNNVPQPFTSFESTGFPSEILREMNKAGFNAPTPIQAQSWPIALQNHDIVAVAKTGSGK 878
G++VPQPFTSFESTGFP EI+RE+ AGF+APTPIQAQSWP+ALQ+ DIVA+AKTGSGK
Sbjct: 154 TGDDVPQPFTSFESTGFPPEIIREVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGK 213
Query: 879 TLGYLLPGFIHLKRSRKNPKLGPTVLVLSPTRELATQIQDEAEKFGQSSSFQCTCLYGGA 1058
TLGYL+PGFIHLKR R NP++GPTVLVLSPTRELATQIQDEA KFG+SS CTCLYGGA
Sbjct: 214 TLGYLIPGFIHLKRIRNNPQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGA 273
Query: 1059 PKGPQLRDLEQGVDIVVATPGRLNDILEMGKITLSQVSYLVLDEADRMLDMGFEPQIRKI 1238
PKGPQLRDL++G DIVVATPGRLNDILEM +++L QVSYLVLDEADRMLDMGFEPQIRKI
Sbjct: 274 PKGPQLRDLDRGADIVVATPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKI 333
Query: 1239 VKEIPARRQTLMYTATWPKSVRNIAAELLNNPVQVNIGRTDELVANKSISQHVEVVKYME 1418
VKE+PARRQTLMYTATWPK VR IAA+LL NPVQVNIG DELVANK+I+Q+VEV+ YME
Sbjct: 334 VKEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYME 393
Query: 1419 KNKRLEQIVQSQEPRSKIIIFCSTKRMCDQLVQYIPRQLGAAAIHGDKSQGERDSVLNKF 1598
K+KRLEQI++SQEP SKIIIFCSTK+MCDQL + + R GAAAIHGDKSQGERD VLN+F
Sbjct: 394 KHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQF 453
Query: 1599 RAGSSPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXXXYTFFTD 1778
R G SP+LVATDVAARGLD+KDIRVVINYDFPTG+EDYVHRI YTFF +
Sbjct: 454 RTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAE 513
Query: 1779 KDAKHASDLVKILEGANQRVPPELREFTSRGWGMSRDR 1892
+DAK+ASDLVK+LEGANQRVPPE+R+ SRG GM R R
Sbjct: 514 QDAKYASDLVKVLEGANQRVPPEIRDMASRGGGMGRSR 551
>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
[Vitis vinifera]
Length = 863
Score = 737 bits (1902), Expect = 0.0
Identities = 381/578 (65%), Positives = 438/578 (75%), Gaps = 1/578 (0%)
Frame = +3
Query: 162 RYAPEDPTLPKPWRGLVDGNTGYLYFWNPVTNTTQYERPTASLDXXXXXXXXXXXLRSCV 341
RYAPEDPTLPKPW+GLVDG TGYLYFWNP TN TQYERP
Sbjct: 9 RYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP--------------------- 47
Query: 342 EVEHSSPEKQQPDTSNGDPKFGATDGGRTIRSCVQVDRSSPEKQPLDTSNGEAVRHDGGR 521
++P S+ +I S VQV +SS ++ N E +++ R
Sbjct: 48 ---------ERPGASSNASLAPPPKSSASISSSVQVQQSSQGQRRDHGLNEEDDKYNRAR 98
Query: 522 T-EQSMRNGGGHLNEVSANANNNGSDMHNTQSLRSSASLGANIGSAVSGDAYRRQHEITV 698
+QS R G H ++ G H S+R S G GS S ++YRR+HEITV
Sbjct: 99 NLQQSARGGTVHSHDPPNGIVGAG---HGGSSVRGQGSSGP--GSGASTESYRRRHEITV 153
Query: 699 IGNNVPQPFTSFESTGFPSEILREMNKAGFNAPTPIQAQSWPIALQNHDIVAVAKTGSGK 878
G++VPQPFTSFESTGFP EI+RE+ AGF+APTPIQAQSWP+ALQ+ DIVA+AKTGSGK
Sbjct: 154 TGDDVPQPFTSFESTGFPPEIIREVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGK 213
Query: 879 TLGYLLPGFIHLKRSRKNPKLGPTVLVLSPTRELATQIQDEAEKFGQSSSFQCTCLYGGA 1058
TLGYL+PGFIHLKR R NP++GPTVLVLSPTRELATQIQDEA KFG+SS CTCLYGGA
Sbjct: 214 TLGYLIPGFIHLKRIRNNPQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGA 273
Query: 1059 PKGPQLRDLEQGVDIVVATPGRLNDILEMGKITLSQVSYLVLDEADRMLDMGFEPQIRKI 1238
PKGPQLRDL++G DIVVATPGRLNDILEM +++L QVSYLVLDEADRMLDMGFEPQIRKI
Sbjct: 274 PKGPQLRDLDRGADIVVATPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKI 333
Query: 1239 VKEIPARRQTLMYTATWPKSVRNIAAELLNNPVQVNIGRTDELVANKSISQHVEVVKYME 1418
VKE+PARRQTLMYTATWPK VR IAA+LL NPVQVNIG DELVANK+I+Q+VEV+ YME
Sbjct: 334 VKEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYME 393
Query: 1419 KNKRLEQIVQSQEPRSKIIIFCSTKRMCDQLVQYIPRQLGAAAIHGDKSQGERDSVLNKF 1598
K+KRLEQI++SQEP SKIIIFCSTK+MCDQL + + R GAAAIHGDKSQGERD VLN+F
Sbjct: 394 KHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQF 453
Query: 1599 RAGSSPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXXXYTFFTD 1778
R G SP+LVATDVAARGLD+KDIRVVINYDFPTG+EDYVHRI YTFF +
Sbjct: 454 RTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAE 513
Query: 1779 KDAKHASDLVKILEGANQRVPPELREFTSRGWGMSRDR 1892
+DAK+ASDLVK+LEGANQRVPPE+R+ SRG GM R R
Sbjct: 514 QDAKYASDLVKVLEGANQRVPPEIRDMASRGGGMGRSR 551
>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
predicted protein [Populus trichocarpa]
Length = 791
Score = 714 bits (1842), Expect = 0.0
Identities = 377/572 (65%), Positives = 429/572 (75%)
Frame = +3
Query: 162 RYAPEDPTLPKPWRGLVDGNTGYLYFWNPVTNTTQYERPTASLDXXXXXXXXXXXLRSCV 341
RYAPEDPTLPKPWRGLVDG TGYLYFWNP TN TQYERPT + S V
Sbjct: 13 RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTLPKSVSSLP------ITSSV 66
Query: 342 EVEHSSPEKQQPDTSNGDPKFGATDGGRTIRSCVQVDRSSPEKQPLDTSNGEAVRHDGGR 521
+V SS P D A + G S +AV
Sbjct: 67 QVHQSSHRGYNPSVKEDDRYGRANNAG---------------------SKPDAVTRSISS 105
Query: 522 TEQSMRNGGGHLNEVSANANNNGSDMHNTQSLRSSASLGANIGSAVSGDAYRRQHEITVI 701
+ QS R G +E N NG + + SSA GS +SG+AYRR+HEITV
Sbjct: 106 SNQSAR-GAAIQSENVPNGTANGL---SARVYGSSAG-----GSGMSGEAYRRRHEITVT 156
Query: 702 GNNVPQPFTSFESTGFPSEILREMNKAGFNAPTPIQAQSWPIALQNHDIVAVAKTGSGKT 881
G+ VP P TSFE+TGFPSEIL+E+ AGF+APTPIQAQSWPIALQ+ DIVAVAKTGSGKT
Sbjct: 157 GDEVPPPLTSFETTGFPSEILKEVLNAGFSAPTPIQAQSWPIALQSRDIVAVAKTGSGKT 216
Query: 882 LGYLLPGFIHLKRSRKNPKLGPTVLVLSPTRELATQIQDEAEKFGQSSSFQCTCLYGGAP 1061
LGYL+PGFIHLKRS +P+LGPTVLVLSPTRELATQIQ EA KFG+SS F CTCLYGGAP
Sbjct: 217 LGYLIPGFIHLKRSCNDPRLGPTVLVLSPTRELATQIQVEAVKFGKSSRFSCTCLYGGAP 276
Query: 1062 KGPQLRDLEQGVDIVVATPGRLNDILEMGKITLSQVSYLVLDEADRMLDMGFEPQIRKIV 1241
KGPQL++L++G DIVVATPGRLNDILEM +++LSQVSYLVLDEADRMLDMGFEPQIRKIV
Sbjct: 277 KGPQLKELDRGADIVVATPGRLNDILEMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIV 336
Query: 1242 KEIPARRQTLMYTATWPKSVRNIAAELLNNPVQVNIGRTDELVANKSISQHVEVVKYMEK 1421
KE+PARRQTLMYTATWPK VR IAA+LL NPVQVNIG DELVANKSI+Q+VE++ +EK
Sbjct: 337 KEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQYVELLAPLEK 396
Query: 1422 NKRLEQIVQSQEPRSKIIIFCSTKRMCDQLVQYIPRQLGAAAIHGDKSQGERDSVLNKFR 1601
++RLEQI++SQE SKIIIFCSTK+MCDQL + + RQ GAAAIHGDKSQ ERD VL++FR
Sbjct: 397 HRRLEQILRSQESGSKIIIFCSTKKMCDQLSRNLTRQFGAAAIHGDKSQSERDYVLSQFR 456
Query: 1602 AGSSPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXXXYTFFTDK 1781
G SPILVATDVAARGLD+KDIRVVINYDFPTG+EDYVHRI YTFF D+
Sbjct: 457 TGRSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQ 516
Query: 1782 DAKHASDLVKILEGANQRVPPELREFTSRGWG 1877
DAKHASDL+K+LEGANQ+VPPE+R+ SRG G
Sbjct: 517 DAKHASDLIKVLEGANQQVPPEIRDMASRGGG 548
>ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
46-like [Cucumis sativus]
Length = 785
Score = 709 bits (1831), Expect = 0.0
Identities = 363/580 (62%), Positives = 435/580 (75%), Gaps = 3/580 (0%)
Frame = +3
Query: 162 RYAPEDPTLPKPWRGLVDGNTGYLYFWNPVTNTTQYERPTASLDXXXXXXXXXXXLRSCV 341
RYAPEDPTLPKPWRGLVDG TGYLYFWNP TN TQYERP A+ + S V
Sbjct: 13 RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSSIVS----ISSSV 68
Query: 342 EVEH-SSPEKQQPDTSNGDPKFGATDGG--RTIRSCVQVDRSSPEKQPLDTSNGEAVRHD 512
+++ SS + + + K+G + + +Q+ Q DTSNG
Sbjct: 69 QIQKPSSGHSYNNNLNENNDKYGRGSHAPKQEVEXKIQIVARGETFQSHDTSNG------ 122
Query: 513 GGRTEQSMRNGGGHLNEVSANANNNGSDMHNTQSLRSSASLGANIGSAVSGDAYRRQHEI 692
+ N + G+ + + ++ G+ +S ++YR++HEI
Sbjct: 123 ------------------TPNTGHGGAPLKGHRP--------SDAGNGISAESYRQRHEI 156
Query: 693 TVIGNNVPQPFTSFESTGFPSEILREMNKAGFNAPTPIQAQSWPIALQNHDIVAVAKTGS 872
T G+NVP PF+SFE+TGFP EILRE++ AGF+APTPIQAQSWPIALQ+ DIVA+AKTGS
Sbjct: 157 TFSGDNVPAPFSSFEATGFPPEILREVHNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGS 216
Query: 873 GKTLGYLLPGFIHLKRSRKNPKLGPTVLVLSPTRELATQIQDEAEKFGQSSSFQCTCLYG 1052
GKTLGYL+PGFIHLKR R +PKLGPTVLVLSPTRELATQIQDEA KFG+SS C CLYG
Sbjct: 217 GKTLGYLIPGFIHLKRIRNDPKLGPTVLVLSPTRELATQIQDEAVKFGKSSRISCACLYG 276
Query: 1053 GAPKGPQLRDLEQGVDIVVATPGRLNDILEMGKITLSQVSYLVLDEADRMLDMGFEPQIR 1232
GAPKG QLRD+++GVDIVVATPGRLNDILEM +I+L QVSYLVLDEADRMLDMGFEPQIR
Sbjct: 277 GAPKGLQLRDIDRGVDIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIR 336
Query: 1233 KIVKEIPARRQTLMYTATWPKSVRNIAAELLNNPVQVNIGRTDELVANKSISQHVEVVKY 1412
KIVKE+PARRQTLMYTATWPK VR IA++LL NP+QVNIG DELVANKSI+QH+E +
Sbjct: 337 KIVKEVPARRQTLMYTATWPKEVRKIASDLLVNPIQVNIGNVDELVANKSITQHIEALAP 396
Query: 1413 MEKNKRLEQIVQSQEPRSKIIIFCSTKRMCDQLVQYIPRQLGAAAIHGDKSQGERDSVLN 1592
+EK++RLEQI++SQEP SK+IIFCSTK+MCDQL + + RQ GAAAIHGDKSQGERD VL
Sbjct: 397 LEKHRRLEQILRSQEPGSKVIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLG 456
Query: 1593 KFRAGSSPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXXXYTFF 1772
+FR G +P+LVATDVAARGLD+KDIRVVINYDFP+G+EDYVHRI YTFF
Sbjct: 457 QFRTGRTPVLVATDVAARGLDIKDIRVVINYDFPSGVEDYVHRIGRTGRAGATGIAYTFF 516
Query: 1773 TDKDAKHASDLVKILEGANQRVPPELREFTSRGWGMSRDR 1892
++DAK+ASDL+KILEGANQRVPPELR+ SR +GM++ R
Sbjct: 517 GEQDAKYASDLIKILEGANQRVPPELRDMASRSYGMAKFR 556
>ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 619
Score = 705 bits (1820), Expect = 0.0
Identities = 371/578 (64%), Positives = 424/578 (73%), Gaps = 1/578 (0%)
Frame = +3
Query: 147 AAARVRYAPEDPTLPKPWRGLVDGNTGYLYFWNPVTNTTQYERPTASLDXXXXXXXXXXX 326
AA RYAP DPTLPKPW+GLVDG TGYLYFWNP TN TQYERP++S
Sbjct: 7 AAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPL--------- 57
Query: 327 LRSCVEVEHSSPEKQQPDTSNGDPKFGATDGGRTIRSCVQVDRSSPEKQPLDTSNGEAVR 506
V SS + QQ G SP+ NG
Sbjct: 58 --KTSSVPSSSVQVQQSSQGRG---------------------RSPDFSDRYDRNGNGGS 94
Query: 507 HDGG-RTEQSMRNGGGHLNEVSANANNNGSDMHNTQSLRSSASLGANIGSAVSGDAYRRQ 683
++GG R QS + G N N N S++S L G A+S DAYRR+
Sbjct: 95 NEGGSRNHQSSK---GDSFSSHNNVANGTPAAGNGSSIKSQVPL--ETGPALSPDAYRRR 149
Query: 684 HEITVIGNNVPQPFTSFESTGFPSEILREMNKAGFNAPTPIQAQSWPIALQNHDIVAVAK 863
HEITV G+NVP P TSF S+GFPSEILRE+ AGF+APTPIQAQSWPIALQ+ DIVA+AK
Sbjct: 150 HEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAK 209
Query: 864 TGSGKTLGYLLPGFIHLKRSRKNPKLGPTVLVLSPTRELATQIQDEAEKFGQSSSFQCTC 1043
TGSGKTLGYLLP FIHLKR+ N K+GPTVLVLSPTRELATQIQDEA KF ++S CTC
Sbjct: 210 TGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKTSRIACTC 269
Query: 1044 LYGGAPKGPQLRDLEQGVDIVVATPGRLNDILEMGKITLSQVSYLVLDEADRMLDMGFEP 1223
LYGGAPKGPQL+D+++G DIVVATPGRLNDILEM +I+L QVSYLVLDEADRMLDMGFEP
Sbjct: 270 LYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEP 329
Query: 1224 QIRKIVKEIPARRQTLMYTATWPKSVRNIAAELLNNPVQVNIGRTDELVANKSISQHVEV 1403
QIRKIV +PARRQTLM+TATWPK VR IAA+LL NPVQVNIG DELVANKSI+QH+EV
Sbjct: 330 QIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEV 389
Query: 1404 VKYMEKNKRLEQIVQSQEPRSKIIIFCSTKRMCDQLVQYIPRQLGAAAIHGDKSQGERDS 1583
+ Y+EK +RLE I++SQ+ SKIIIFCSTK+MCDQL + + RQ GAAAIHGDKSQ +RD
Sbjct: 390 LTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDH 449
Query: 1584 VLNKFRAGSSPILVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRIXXXXXXXXXXXXY 1763
VLN+FR+G +P+LVATDVAARGLDVKDIRVV+N+DFPTG+EDYVHRI Y
Sbjct: 450 VLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAY 509
Query: 1764 TFFTDKDAKHASDLVKILEGANQRVPPELREFTSRGWG 1877
TFF D+DAKHASDL+KILEGANQRVPPELRE +SRG G
Sbjct: 510 TFFGDQDAKHASDLIKILEGANQRVPPELRELSSRGGG 547