BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007122
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...   267   3e-69
ref|XP_004166615.1| PREDICTED: mediator of RNA polymerase II tra...   257   4e-66
ref|XP_004146891.1| PREDICTED: mediator of RNA polymerase II tra...   255   1e-65
gb|AFK36513.1| unknown [Medicago truncatula]                          249   6e-64
gb|AFK35607.1| unknown [Lotus japonicus]                              248   2e-63

>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score =  267 bits (683), Expect = 3e-69
 Identities = 133/196 (67%), Positives = 141/196 (71%)
 Frame = -2

Query: 865 MASDKDGKDADLTSLSPPNLYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEA 686
           M S K+   A  T  SP N+YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEA
Sbjct: 1   MDSGKESDSAADTPTSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEA 60

Query: 685 FIGYLKYLQYWQKPEYAKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFFWKN 506
           FIGYLKYLQYWQ+PEY KFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFF+WKN
Sbjct: 61  FIGYLKYLQYWQQPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFYWKN 120

Query: 505 YRNNRLKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMQFGVPPGPVLA 326
           YRNNRLKHI                                      PMQ+G+P G  L+
Sbjct: 121 YRNNRLKHILPKPLPEPLAGTPAPGPPPQSAPPTTIAVTSAGSPALSPMQYGIPAGSSLS 180

Query: 325 KNDMRNIGGDRRKRKE 278
           KNDMRN   DRRKRK+
Sbjct: 181 KNDMRNSAIDRRKRKK 196


>ref|XP_004166615.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Cucumis sativus]
          Length = 206

 Score =  257 bits (656), Expect = 4e-66
 Identities = 131/198 (66%), Positives = 144/198 (72%), Gaps = 5/198 (2%)
 Frame = -2

Query: 844 KDADLTSLSPPNLYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKY 665
           ++AD  S SP N+YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRY EDEAFIGYLKY
Sbjct: 10  EEADNPS-SPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKY 68

Query: 664 LQYWQKPEYAKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFFWKNYRNNRLK 485
           LQYWQ+PEY KFIMYPHCLFFLELLQN+NFRNAMAHPG+KELAHRQQF+FWKNYRNNRLK
Sbjct: 69  LQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLK 128

Query: 484 HI----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMQFGVPPGPVLAKND 317
           HI                                          PMQ+G+PPGP L KND
Sbjct: 129 HILPRPLPEPAALPPPVTAPPQAAVPAPTSAPNMAASPAAPALSPMQYGIPPGPGLPKND 188

Query: 316 MRNIGGDRRKRK-ERNVS 266
           M+  G DRRKRK ER+++
Sbjct: 189 MKGAGIDRRKRKHERSMT 206


>ref|XP_004146891.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Cucumis sativus]
          Length = 206

 Score =  255 bits (652), Expect = 1e-65
 Identities = 130/198 (65%), Positives = 144/198 (72%), Gaps = 5/198 (2%)
 Frame = -2

Query: 844 KDADLTSLSPPNLYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKY 665
           ++AD  S SP N+YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRY EDEAFIGYLKY
Sbjct: 10  EEADNPS-SPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKY 68

Query: 664 LQYWQKPEYAKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFFWKNYRNNRLK 485
           LQYWQ+PEY KFIMYPHCLFFLELLQN+NFRNAMAHPG+KELAHRQQF+FWKNYRNNRLK
Sbjct: 69  LQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLK 128

Query: 484 HI----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMQFGVPPGPVLAKND 317
           HI                                          P+Q+G+PPGP L KND
Sbjct: 129 HILPRPLPEPAALPPPVTAPPQAAVPAPTSAPNMAASPAAPALSPIQYGIPPGPGLPKND 188

Query: 316 MRNIGGDRRKRK-ERNVS 266
           M+  G DRRKRK ER+++
Sbjct: 189 MKGAGIDRRKRKHERSMT 206


>gb|AFK36513.1| unknown [Medicago truncatula]
          Length = 204

 Score =  249 bits (637), Expect = 6e-64
 Identities = 124/199 (62%), Positives = 134/199 (67%), Gaps = 8/199 (4%)
 Frame = -2

Query: 853 KDGKDADLTSLSPPNLYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGY 674
           + G   D     P ++YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGY
Sbjct: 6   ESGSPRDTPPSPPKSIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGY 65

Query: 673 LKYLQYWQKPEYAKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFFWKNYRNN 494
           LKYLQYWQ+PEY KFIMYPHCL+FLELLQNANFRNAMAHP +KEL HRQQF+FWKNYRNN
Sbjct: 66  LKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELTHRQQFYFWKNYRNN 125

Query: 493 RLKHI--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMQFGVPPG 338
           RLKHI                                              PM +G+PPG
Sbjct: 126 RLKHILPRSLAEPSAALPAPASTQPQPPVPALPPVPATSVAVTTSSSQAPSPMPYGIPPG 185

Query: 337 PVLAKNDMRNIGGDRRKRK 281
             +AKNDMRN   DRRKRK
Sbjct: 186 SGIAKNDMRNTSADRRKRK 204


>gb|AFK35607.1| unknown [Lotus japonicus]
          Length = 206

 Score =  248 bits (632), Expect = 2e-63
 Identities = 127/206 (61%), Positives = 140/206 (67%), Gaps = 11/206 (5%)
 Frame = -2

Query: 865 MASDKDGKDA-DLTSLSPPNLYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 689
           M S  DG+++ D T   P N+YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MTSKTDGENSTDTTPSLPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 688 AFIGYLKYLQYWQKPEYAKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFFWK 509
           AFIGYLKYLQYWQ+PEY KFIMYPHCL+FLE LQNANFR+AMAHP +KELAHRQQF+FWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLERLQNANFRSAMAHPNNKELAHRQQFYFWK 120

Query: 508 NYRNNRLKHI----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPM 359
           NYRNNRLKHI                                                PM
Sbjct: 121 NYRNNRLKHILPRSLPEPSATPALPAPASTPIQPPVPALPPAPATNVAVTASSAQAPSPM 180

Query: 358 QFGVPPGPVLAKNDMRNIGGDRRKRK 281
            +G+PPG  LAK+DMRN   DRR+RK
Sbjct: 181 PYGIPPGSGLAKSDMRNPTVDRRRRK 206