BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007118
         (1823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   659   0.0  
ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...   639   0.0  
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   576   e-162
gb|ACU18704.1| unknown [Glycine max]                                  423   e-116
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...   421   e-115

>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
            [Cucumis sativus] gi|449484825|ref|XP_004156991.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  659 bits (1699), Expect = 0.0
 Identities = 335/548 (61%), Positives = 407/548 (74%), Gaps = 3/548 (0%)
 Frame = -1

Query: 1676 NHKNSKSLTRNPRIKSPNAIASRATREIRYESDVITPDFSETSSSSDAV-LICSLLFNSV 1500
            +H  S S T N    +P A+A R T          TP    T  SSD V  +CSLL N  
Sbjct: 24   SHFFSTSKTTNHIAIAPRALARRPTSRT-----APTPRSPNTLGSSDVVNSVCSLLSNKN 78

Query: 1499 GQSQNLD--HLLKGFKNKINSNLVLEILMNYRHLGPANTLDFFSWAGFQMGFGFDDSVVE 1326
             Q+ NLD  HLLK FK+ ++S+ VL+ILMNY+ LG A TL+FFSW+G QMGF FD SVVE
Sbjct: 79   PQTPNLDLDHLLKRFKDNLSSDFVLQILMNYKLLGRAKTLEFFSWSGLQMGFRFDASVVE 138

Query: 1325 YMADFLGRRKLFDDLKCLLKTVYSSKGYVSSRTVSICIRFLGRQGRIKDALCLFEEMEAE 1146
            YMADFLGRRKLFDD+KCLL TV S KG +S RT SICIRFLGRQGR+++ALCLFEEME +
Sbjct: 139  YMADFLGRRKLFDDMKCLLVTVLSHKGRISCRTFSICIRFLGRQGRVREALCLFEEMEPK 198

Query: 1145 FNCKPDNFVFNNVLYVLCKKETSGEFIDVALMIFRKIETPDVYSYSNILVGLCKFYRVEN 966
            F CKPDN VFNN+LY LCKKE +GE ID AL IFR+IE PD YSYSN+++GLCKF R   
Sbjct: 199  FGCKPDNLVFNNMLYALCKKEPTGELIDTALKIFRRIELPDKYSYSNVIIGLCKFGRYST 258

Query: 965  AVEVFHEMCRANLLPTRSAVNILIGELCKMNISEECVEKVRVTNFRRPFTILVPNVGLKG 786
            A+E F EM RA L+PTR+AVNILIG LC ++  E  VEKVRV +  RPFT+LVPNV  K 
Sbjct: 259  AIEAFGEMYRAGLVPTRTAVNILIGNLCSLSAKEGAVEKVRVNSTYRPFTVLVPNVNPKS 318

Query: 785  GAILAAAQIFWSMGDLGLLPSPFIINQLISELCRSRKIDDAIKIFQVVESRKLKCLEESY 606
            GAI  A  IFW+   L L+PS F+  QLISELCR  ++ +AI++ +VVE  KL+C EE Y
Sbjct: 319  GAIEPAVGIFWAANKLSLVPSSFVTVQLISELCRLGQMQEAIRVLKVVEGDKLRCAEECY 378

Query: 605  TIIIQALCEVRRVEEACKLFGQMLSQDIKPKLTVYNSIICMLCKLGKVEKAGRLFEIMNK 426
            +++++ALCE R V+EA  LFG+MLSQ +KPKL +YN +ICMLCKLG ++ A R+F IMNK
Sbjct: 379  SVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAIYNYVICMLCKLGNLDSAERVFGIMNK 438

Query: 425  RRCGPDNVTYTALIHGYGGAFNWEAAHGLLVEMLKMGWCPHFHTYSLVDKLLKEHGHIDL 246
            +RC PD+VTY+ALIH YG   +W AA+GLL EML +G  PHFH YS+VDKL++EHG IDL
Sbjct: 439  KRCAPDHVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYSIVDKLMREHGQIDL 498

Query: 245  ALKLERKLEIQLLHKYCKEGRLEAAYEKLSYMLERGFHLPIYTRDAFQRAFQKAGKQKIA 66
             LKLE K E Q+L K CK+G+LEAAYEK+  MLE+G   PIY RDAF+ AFQK GK KIA
Sbjct: 499  CLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDAFESAFQKKGKFKIA 558

Query: 65   CELLKKID 42
             ELL+K+D
Sbjct: 559  RELLQKMD 566


>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
            predicted protein [Populus trichocarpa]
          Length = 484

 Score =  639 bits (1649), Expect = 0.0
 Identities = 310/479 (64%), Positives = 381/479 (79%)
 Frame = -1

Query: 1451 INSNLVLEILMNYRHLGPANTLDFFSWAGFQMGFGFDDSVVEYMADFLGRRKLFDDLKCL 1272
            +NS++VL++LMNY+ LG   TL+FFSWAG QMGF FDD V+EYM DFLGRRKLFDD+KC 
Sbjct: 2    LNSDIVLQVLMNYKQLGRVKTLEFFSWAGMQMGFKFDDCVIEYMVDFLGRRKLFDDMKCF 61

Query: 1271 LKTVYSSKGYVSSRTVSICIRFLGRQGRIKDALCLFEEMEAEFNCKPDNFVFNNVLYVLC 1092
            L TV    G V+ R  SICIRFLGRQGR ++ALCLF+EME +FNC+PDNFV+NN+LYVLC
Sbjct: 62   LMTVLFHNGRVTCRAFSICIRFLGRQGRFREALCLFQEMETKFNCRPDNFVYNNMLYVLC 121

Query: 1091 KKETSGEFIDVALMIFRKIETPDVYSYSNILVGLCKFYRVENAVEVFHEMCRANLLPTRS 912
            KK+TSGE IDVAL IFR IE+PD YSYSN+LVGLCKF R E A+E F EM RA L+PTRS
Sbjct: 122  KKDTSGELIDVALSIFRGIESPDTYSYSNVLVGLCKFGRFETAIEFFQEMGRARLVPTRS 181

Query: 911  AVNILIGELCKMNISEECVEKVRVTNFRRPFTILVPNVGLKGGAILAAAQIFWSMGDLGL 732
            AVN L+ ELC ++  E  V +VRV + R+P+TILVPNVG K GAI  A  +F ++ DLGL
Sbjct: 182  AVNFLMRELCLLSAKEGAVNEVRVHSSRKPYTILVPNVGPKSGAIRPAVGVFLAVCDLGL 241

Query: 731  LPSPFIINQLISELCRSRKIDDAIKIFQVVESRKLKCLEESYTIIIQALCEVRRVEEACK 552
            LPS F+I QLI+ELCR  K+ +A +I +VVE RK  C+ E Y+I++QALCE R VEEA  
Sbjct: 242  LPSTFVIIQLITELCRLGKMTEAFEILKVVEERKQNCVAEGYSIVMQALCEYRLVEEASH 301

Query: 551  LFGQMLSQDIKPKLTVYNSIICMLCKLGKVEKAGRLFEIMNKRRCGPDNVTYTALIHGYG 372
            LFG+MLS ++KPKL VYNSIICMLCK+G+++ A R+F+IM+K+RC PD+VTYTAL+H YG
Sbjct: 302  LFGRMLSLELKPKLVVYNSIICMLCKVGRLDDAQRVFQIMSKKRCLPDSVTYTALVHAYG 361

Query: 371  GAFNWEAAHGLLVEMLKMGWCPHFHTYSLVDKLLKEHGHIDLALKLERKLEIQLLHKYCK 192
             A NWE A+ LL+EML +GW PHFH Y+LVDKLL+EHG IDL+ KLERKLE Q+LHK+CK
Sbjct: 362  EARNWEVAYDLLMEMLGLGWIPHFHAYTLVDKLLREHGRIDLSNKLERKLESQILHKHCK 421

Query: 191  EGRLEAAYEKLSYMLERGFHLPIYTRDAFQRAFQKAGKQKIACELLKKIDHGISKSAIE 15
             G+LEAAYEKL  MLE+GF+ P+Y RDAF+ AFQK GK +IA ELL+ +D     S  E
Sbjct: 422  AGQLEAAYEKLRSMLEKGFYPPMYVRDAFEHAFQKYGKLEIARELLENMDKACEPSTTE 480


>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499354|gb|AES80557.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  576 bits (1484), Expect = e-162
 Identities = 290/541 (53%), Positives = 385/541 (71%), Gaps = 1/541 (0%)
 Frame = -1

Query: 1667 NSKSLTRNPRIKSPNAIASRATREIRYESDVITPDFSETSSSSDA-VLICSLLFNSVGQS 1491
            +SK    NP + +P + +S++ R    +     P  S  S  +    L+  L+       
Sbjct: 30   SSKKNKTNPNLINPKSPSSKSPRPTSSK-----PSISNLSPKTTLYTLLTDLVSCPTDTD 84

Query: 1490 QNLDHLLKGFKNKINSNLVLEILMNYRHLGPANTLDFFSWAGFQMGFGFDDSVVEYMADF 1311
              +D++L  +K ++ S+LVL +LM+Y HLG   TL FFSWAG +M F FDDSV+EYM DF
Sbjct: 85   TAIDNVLDCYKAELTSDLVLRVLMSYNHLGRTKTLKFFSWAGTKMDFQFDDSVIEYMVDF 144

Query: 1310 LGRRKLFDDLKCLLKTVYSSKGYVSSRTVSICIRFLGRQGRIKDALCLFEEMEAEFNCKP 1131
             GRRKLFDD+KCLL T+ + KG VSS+ +SICIRFLGR+GRI + L LF+EME+ F CKP
Sbjct: 145  FGRRKLFDDIKCLLMTIVAHKGQVSSKALSICIRFLGREGRINEVLSLFDEMESVFGCKP 204

Query: 1130 DNFVFNNVLYVLCKKETSGEFIDVALMIFRKIETPDVYSYSNILVGLCKFYRVENAVEVF 951
            DN V NNVLYVLCKK++S E I++AL IF KIE+PD YS SN++VGLC+  R E A+E+F
Sbjct: 205  DNLVCNNVLYVLCKKQSSEEMIELALSIFDKIESPDTYSCSNMIVGLCRLGRFEAALEIF 264

Query: 950  HEMCRANLLPTRSAVNILIGELCKMNISEECVEKVRVTNFRRPFTILVPNVGLKGGAILA 771
             +M R  + PTRSA+N+LIG+LC M+  E  VEKV+VT  RRP++ILVPN+G    AI  
Sbjct: 265  RKMDRVGVHPTRSAMNVLIGDLCLMSAKEGSVEKVKVTKTRRPYSILVPNMGGNRAAIQP 324

Query: 770  AAQIFWSMGDLGLLPSPFIINQLISELCRSRKIDDAIKIFQVVESRKLKCLEESYTIIIQ 591
            A ++F ++ + GLLPS F++ +L+SELCR    ++A+K+ ++VE +KL C++E Y+I+I+
Sbjct: 325  AVEVFSAVVNSGLLPSTFVVFRLMSELCRLGNTEEAVKVLRIVEEKKLTCVQEGYSIVIK 384

Query: 590  ALCEVRRVEEACKLFGQMLSQDIKPKLTVYNSIICMLCKLGKVEKAGRLFEIMNKRRCGP 411
            ALC+ RRVEEA KLFG+ML   +KPKL VYNS+I MLCKLG ++ A  +FEIMNK RC P
Sbjct: 385  ALCDHRRVEEAGKLFGRMLEIGLKPKLVVYNSVISMLCKLGDLDNANGVFEIMNKNRCFP 444

Query: 410  DNVTYTALIHGYGGAFNWEAAHGLLVEMLKMGWCPHFHTYSLVDKLLKEHGHIDLALKLE 231
            D++TY ALIH      NW+ A+ LL+EML +GW PHFHTY+LVD LL+EH  +DL  KLE
Sbjct: 445  DSITYIALIHAQCACKNWKVAYELLMEMLGLGWIPHFHTYNLVDSLLREHDQLDLCHKLE 504

Query: 230  RKLEIQLLHKYCKEGRLEAAYEKLSYMLERGFHLPIYTRDAFQRAFQKAGKQKIACELLK 51
            RKLE Q L K CKEG+L  AYEK+  MLE+G  L  Y RD F+  FQK GK +IA +LL+
Sbjct: 505  RKLENQKLLKLCKEGQLGDAYEKVKAMLEKGVRLSAYARDTFEHEFQKCGKLEIAHDLLE 564

Query: 50   K 48
            K
Sbjct: 565  K 565


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score =  423 bits (1087), Expect = e-116
 Identities = 208/356 (58%), Positives = 268/356 (75%)
 Frame = -1

Query: 1109 VLYVLCKKETSGEFIDVALMIFRKIETPDVYSYSNILVGLCKFYRVENAVEVFHEMCRAN 930
            +LYVLCK+E+S E I++AL IF KI+ PD YS SN++VGLCK  R+E+A+E+F  M R  
Sbjct: 1    MLYVLCKRESSLEMIELALSIFHKIDAPDTYSCSNMIVGLCKLGRLESALEIFDRMNRIG 60

Query: 929  LLPTRSAVNILIGELCKMNISEECVEKVRVTNFRRPFTILVPNVGLKGGAILAAAQIFWS 750
            +LPTRSAVN+LIGELC M+  E  VEKVRV N RRP+TILVPN+G   GAI  A Q+FW+
Sbjct: 61   VLPTRSAVNLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWA 120

Query: 749  MGDLGLLPSPFIINQLISELCRSRKIDDAIKIFQVVESRKLKCLEESYTIIIQALCEVRR 570
            +   GLLPS F++ +L+SELCR     +A+++ ++VE RKL  ++E Y+++I ALCE  R
Sbjct: 121  VCSSGLLPSAFVVVKLMSELCRLGNTVEAVRVLRIVEERKLTSVQEGYSVVINALCECCR 180

Query: 569  VEEACKLFGQMLSQDIKPKLTVYNSIICMLCKLGKVEKAGRLFEIMNKRRCGPDNVTYTA 390
            VEEA  LFG+MLS  +KPKL VYNS+I MLCK GK++ A R+FEIMNK RC PD +TYTA
Sbjct: 181  VEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFGKLKDATRVFEIMNKNRCLPDGLTYTA 240

Query: 389  LIHGYGGAFNWEAAHGLLVEMLKMGWCPHFHTYSLVDKLLKEHGHIDLALKLERKLEIQL 210
            LIH +G   NW+ ++ LL+EML +GW PHFHT++LV+ LL+EHG +DL +KLERKLE Q 
Sbjct: 241  LIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLVESLLREHGQLDLCVKLERKLENQK 300

Query: 209  LHKYCKEGRLEAAYEKLSYMLERGFHLPIYTRDAFQRAFQKAGKQKIACELLKKID 42
            L K CK G L+AAYEK   MLE+G  L  Y RD FQ+ FQK GK KIA +LL+K +
Sbjct: 301  LQKLCKGGELDAAYEKARSMLEKGIPLSAYARDIFQQVFQKCGKIKIARQLLEKTE 356


>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
            [Glycine max]
          Length = 367

 Score =  421 bits (1081), Expect = e-115
 Identities = 207/356 (58%), Positives = 267/356 (75%)
 Frame = -1

Query: 1109 VLYVLCKKETSGEFIDVALMIFRKIETPDVYSYSNILVGLCKFYRVENAVEVFHEMCRAN 930
            +LYVLCK+E+S E I++AL IF KI+ PD YS SN++VGLCK  R+E+A+E+F  M R  
Sbjct: 1    MLYVLCKRESSLEMIELALSIFHKIDAPDTYSCSNMIVGLCKLGRLESALEIFDRMNRIG 60

Query: 929  LLPTRSAVNILIGELCKMNISEECVEKVRVTNFRRPFTILVPNVGLKGGAILAAAQIFWS 750
            +LPTRSAVN+LIGELC M+  E  VEKVRV N RRP+TILVPN+G   GAI  A Q+FW+
Sbjct: 61   VLPTRSAVNLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWA 120

Query: 749  MGDLGLLPSPFIINQLISELCRSRKIDDAIKIFQVVESRKLKCLEESYTIIIQALCEVRR 570
            +   GLLPS F++ +L+SELCR     +A+++ ++VE RKL  ++E Y+++I ALCE  R
Sbjct: 121  VCSSGLLPSAFVVVKLMSELCRLGNTVEAVRVLRIVEERKLTSVQEGYSVVINALCECCR 180

Query: 569  VEEACKLFGQMLSQDIKPKLTVYNSIICMLCKLGKVEKAGRLFEIMNKRRCGPDNVTYTA 390
            VEEA  LFG+MLS  +KPKL VYNS+I MLCK GK++ A R+FEIMNK RC PD +TYTA
Sbjct: 181  VEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFGKLKDATRVFEIMNKNRCLPDGLTYTA 240

Query: 389  LIHGYGGAFNWEAAHGLLVEMLKMGWCPHFHTYSLVDKLLKEHGHIDLALKLERKLEIQL 210
            LIH +G   NW+ ++ LL+EML +GW PHFHT++LV+ LL+EH  +DL +KLERKLE Q 
Sbjct: 241  LIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLVESLLREHDQLDLCVKLERKLENQK 300

Query: 209  LHKYCKEGRLEAAYEKLSYMLERGFHLPIYTRDAFQRAFQKAGKQKIACELLKKID 42
            L K CK G L+AAYEK   MLE+G  L  Y RD FQ+ FQK GK KIA +LL+K +
Sbjct: 301  LQKLCKGGELDAAYEKAQSMLEKGIPLSAYARDIFQQVFQKCGKIKIARQLLEKTE 356