BLASTX nr result

ID: Cimicifuga21_contig00007117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007117
         (1539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Rici...   568   e-159
ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, c...   564   e-158
pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase Fr...   559   e-157
ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
gb|AAG28565.1|AF200325_1 dihydrodipicolinate synthase 2 [Arabido...   544   e-152

>ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Ricinus communis]
            gi|223539104|gb|EEF40700.1| dihydrodipicolinate synthase,
            putative [Ricinus communis]
          Length = 367

 Score =  568 bits (1464), Expect = e-159
 Identities = 272/330 (82%), Positives = 302/330 (91%)
 Frame = +2

Query: 2    SPKAAVIPNFHLPMRSLEVKNRTSSEDIKALRLITAIKTPYLPDGRFDLEAYDALMHMQI 181
            SP+AAVIPNFHLPMRS EVKNRTSSEDIK+LRLITAIKTPYLPDGRFDLEAYDAL++MQI
Sbjct: 38   SPQAAVIPNFHLPMRSFEVKNRTSSEDIKSLRLITAIKTPYLPDGRFDLEAYDALLNMQI 97

Query: 182  VNXXXXXXXXXXXXXXHLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHASEQG 361
            VN               LMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHA+EQG
Sbjct: 98   VNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQG 157

Query: 362  FAVGMHAALHINPYYGKTSLDGLVSHFEAVLSMGPTIIYNVPSRTGQDIPPSVIRSVAQN 541
            FAVGMHAALHINPYYGKTSL+GLVSHF++VL MGPTIIYNVPSRTGQDIPP VI ++AQ+
Sbjct: 158  FAVGMHAALHINPYYGKTSLEGLVSHFDSVLPMGPTIIYNVPSRTGQDIPPCVIHTIAQS 217

Query: 542  ANFAGIKECMGNDRNKEYTDNGIVVWSGNDDQCHDARWNVGAVGVVSVTSNLVPGLMQEL 721
             N AG+KEC+GNDR +EYT+ GIVVWSGNDDQCHD+RWN GA GV+SVTSNLVPGLM++L
Sbjct: 218  PNLAGVKECVGNDRVEEYTEKGIVVWSGNDDQCHDSRWNHGATGVISVTSNLVPGLMRQL 277

Query: 722  MFGGRNTSLNSKLMPLIDWLFREPNPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVN 901
            +F G+N +LNSKL+PLIDWLF+EPNPIGLNTALAQLGVVRPVFRLPYVPLPLA+R+EFVN
Sbjct: 278  VFEGKNPALNSKLLPLIDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAQRVEFVN 337

Query: 902  IVKELGRENFVGEKDVQVLDDDDFILVGRY 991
            +VK +GRENFVGEKDV+VLDDDDFIL+GRY
Sbjct: 338  LVKAIGRENFVGEKDVRVLDDDDFILIGRY 367


>ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, chloroplastic [Vitis
            vinifera] gi|296089164|emb|CBI38867.3| unnamed protein
            product [Vitis vinifera]
          Length = 365

 Score =  564 bits (1454), Expect = e-158
 Identities = 270/330 (81%), Positives = 301/330 (91%)
 Frame = +2

Query: 2    SPKAAVIPNFHLPMRSLEVKNRTSSEDIKALRLITAIKTPYLPDGRFDLEAYDALMHMQI 181
            S +AAVIPNFHLPMRS EVKNRTS +DIK+LRLITAIKTPYLPDGRFDLEAYDAL++MQI
Sbjct: 36   SAQAAVIPNFHLPMRSFEVKNRTSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQI 95

Query: 182  VNXXXXXXXXXXXXXXHLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHASEQG 361
            V+               LMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHA+EQG
Sbjct: 96   VDGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQG 155

Query: 362  FAVGMHAALHINPYYGKTSLDGLVSHFEAVLSMGPTIIYNVPSRTGQDIPPSVIRSVAQN 541
            FAVGMHAALHINPYYGKTSL+GLVSHFE+VL MGPT+IYNVPSRTGQDIPP VI +VAQ+
Sbjct: 156  FAVGMHAALHINPYYGKTSLEGLVSHFESVLPMGPTVIYNVPSRTGQDIPPGVIHTVAQS 215

Query: 542  ANFAGIKECMGNDRNKEYTDNGIVVWSGNDDQCHDARWNVGAVGVVSVTSNLVPGLMQEL 721
            AN AG+KEC+GNDR K+YTDN IVVWSGNDDQCHDA+W+ GA GV+SVTSNL+PGLM++L
Sbjct: 216  ANLAGVKECVGNDRIKQYTDNRIVVWSGNDDQCHDAKWDYGATGVISVTSNLIPGLMRQL 275

Query: 722  MFGGRNTSLNSKLMPLIDWLFREPNPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVN 901
            +F G+N SLN+K+MPL++WLF EPNPIGLNTALAQLGVVRPVFRLPYVPLPLA+R+EFVN
Sbjct: 276  LFKGKNPSLNAKIMPLVNWLFEEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVN 335

Query: 902  IVKELGRENFVGEKDVQVLDDDDFILVGRY 991
            IVKE+GRENFVGEKDV+VLDDDDFILVGRY
Sbjct: 336  IVKEIGRENFVGEKDVKVLDDDDFILVGRY 365


>pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase From The Common
           Grapevine gi|400261064|pdb|3TUU|B Chain B, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261065|pdb|3TUU|C Chain C, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261066|pdb|3TUU|D Chain D, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261067|pdb|3TUU|E Chain E, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261068|pdb|3TUU|F Chain F, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261069|pdb|3TUU|G Chain G, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261070|pdb|3TUU|H Chain H, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
          Length = 346

 Score =  559 bits (1440), Expect = e-157
 Identities = 267/326 (81%), Positives = 297/326 (91%)
 Frame = +2

Query: 14  AVIPNFHLPMRSLEVKNRTSSEDIKALRLITAIKTPYLPDGRFDLEAYDALMHMQIVNXX 193
           AVIPNFHLPMRS EVKNRTS +DIK+LRLITAIKTPYLPDGRFDLEAYDAL++MQIV+  
Sbjct: 21  AVIPNFHLPMRSFEVKNRTSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDGA 80

Query: 194 XXXXXXXXXXXXHLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHASEQGFAVG 373
                        LMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHA+EQGFAVG
Sbjct: 81  EGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVG 140

Query: 374 MHAALHINPYYGKTSLDGLVSHFEAVLSMGPTIIYNVPSRTGQDIPPSVIRSVAQNANFA 553
           MHAALHINPYYGKTSL+GLVSHFE+VL MGPT+IYNVPSRTGQDIPP VI +VAQ+AN A
Sbjct: 141 MHAALHINPYYGKTSLEGLVSHFESVLPMGPTVIYNVPSRTGQDIPPGVIHTVAQSANLA 200

Query: 554 GIKECMGNDRNKEYTDNGIVVWSGNDDQCHDARWNVGAVGVVSVTSNLVPGLMQELMFGG 733
           G+ EC+GNDR K+YTDN IVVWSGNDDQCHDA+W+ GA GV+SVTSNL+PGLM++L+F G
Sbjct: 201 GVXECVGNDRIKQYTDNRIVVWSGNDDQCHDAKWDYGATGVISVTSNLIPGLMRQLLFKG 260

Query: 734 RNTSLNSKLMPLIDWLFREPNPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVNIVKE 913
           +N SLN+K+MPL++WLF EPNPIGLNTALAQLGVVRPVFRLPYVPLPLA+R+EFVNIVKE
Sbjct: 261 KNPSLNAKIMPLVNWLFEEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVNIVKE 320

Query: 914 LGRENFVGEKDVQVLDDDDFILVGRY 991
           +GRENFVGEKDV+VLDDDDFILVGRY
Sbjct: 321 IGRENFVGEKDVKVLDDDDFILVGRY 346


>ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|222843027|gb|EEE80574.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  551 bits (1420), Expect = e-154
 Identities = 262/330 (79%), Positives = 296/330 (89%)
 Frame = +2

Query: 2    SPKAAVIPNFHLPMRSLEVKNRTSSEDIKALRLITAIKTPYLPDGRFDLEAYDALMHMQI 181
            SP+AA IP+ HLPMRS EVKNRTS+EDIK+LRLITAIKTPYLPDGRFDLEAYDAL++MQI
Sbjct: 36   SPQAAAIPDLHLPMRSFEVKNRTSAEDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQI 95

Query: 182  VNXXXXXXXXXXXXXXHLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHASEQG 361
            VN               LMSWDEHIMLIGHTVNCFG S+KVIGNTGSNSTREAIHA+EQG
Sbjct: 96   VNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGSSVKVIGNTGSNSTREAIHATEQG 155

Query: 362  FAVGMHAALHINPYYGKTSLDGLVSHFEAVLSMGPTIIYNVPSRTGQDIPPSVIRSVAQN 541
            FAVGMHAALHINPYYGKTS++G+VSHF+ VL MGPTIIYNVPSRTGQDIPP VI ++AQ+
Sbjct: 156  FAVGMHAALHINPYYGKTSVEGMVSHFDCVLPMGPTIIYNVPSRTGQDIPPRVIHTIAQS 215

Query: 542  ANFAGIKECMGNDRNKEYTDNGIVVWSGNDDQCHDARWNVGAVGVVSVTSNLVPGLMQEL 721
             N AG+KEC+GNDR ++YTD GIVVWSGNDDQCHDARWN GA GV+SVTSNL+PGLM++L
Sbjct: 216  PNLAGVKECVGNDRVEQYTDKGIVVWSGNDDQCHDARWNHGATGVISVTSNLLPGLMRKL 275

Query: 722  MFGGRNTSLNSKLMPLIDWLFREPNPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVN 901
            MF G+N+ LNSKL+PLIDWLF+EPNPI LNTALAQLGVVRPVFRLPY+PLPLA+RIEFVN
Sbjct: 276  MFEGKNSELNSKLLPLIDWLFQEPNPIALNTALAQLGVVRPVFRLPYMPLPLAKRIEFVN 335

Query: 902  IVKELGRENFVGEKDVQVLDDDDFILVGRY 991
            +VK++GRENFVGE +VQVLDDDDFIL+ RY
Sbjct: 336  LVKKIGRENFVGENNVQVLDDDDFILISRY 365


>gb|AAG28565.1|AF200325_1 dihydrodipicolinate synthase 2 [Arabidopsis thaliana]
          Length = 365

 Score =  544 bits (1402), Expect = e-152
 Identities = 256/330 (77%), Positives = 295/330 (89%)
 Frame = +2

Query: 2    SPKAAVIPNFHLPMRSLEVKNRTSSEDIKALRLITAIKTPYLPDGRFDLEAYDALMHMQI 181
            SPKAAV+PNFHLPMRSLEVKNRT+++DIKALR+ITAIKTPYLPDGRFDLEAYD L+++QI
Sbjct: 36   SPKAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQI 95

Query: 182  VNXXXXXXXXXXXXXXHLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHASEQG 361
             N               LMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHA+EQG
Sbjct: 96   QNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQG 155

Query: 362  FAVGMHAALHINPYYGKTSLDGLVSHFEAVLSMGPTIIYNVPSRTGQDIPPSVIRSVAQN 541
            FAVGMHAALHINPYYGKTS++GL++HF++VL MGPTIIYNVP RTGQDIPP  I  ++QN
Sbjct: 156  FAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTGQDIPPRAIFKLSQN 215

Query: 542  ANFAGIKECMGNDRNKEYTDNGIVVWSGNDDQCHDARWNVGAVGVVSVTSNLVPGLMQEL 721
             N AG+KEC+GN R +EYT+NG+VVWSGNDD+CHD+RW+ GA GV+SVTSNLVPGLM++L
Sbjct: 216  PNLAGVKECVGNKRVEEYTENGVVVWSGNDDECHDSRWDYGATGVISVTSNLVPGLMRKL 275

Query: 722  MFGGRNTSLNSKLMPLIDWLFREPNPIGLNTALAQLGVVRPVFRLPYVPLPLARRIEFVN 901
            MF GRN+SLNSKL+PL+ WLF EPNPIG+NTALAQLGV RPVFRLPYVPLPL++R+EFV 
Sbjct: 276  MFEGRNSSLNSKLLPLMAWLFHEPNPIGINTALAQLGVSRPVFRLPYVPLPLSKRLEFVK 335

Query: 902  IVKELGRENFVGEKDVQVLDDDDFILVGRY 991
            +VKE+GRE+FVGEKDVQ LDDDDFIL+GRY
Sbjct: 336  LVKEIGREHFVGEKDVQALDDDDFILIGRY 365


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