BLASTX nr result

ID: Cimicifuga21_contig00007077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007077
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...   249   8e-64
emb|CBI28266.3| unnamed protein product [Vitis vinifera]              244   3e-62
ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...   242   1e-61
ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60
ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...   236   1e-59

>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
            vinifera] gi|147866225|emb|CAN79937.1| hypothetical
            protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score =  249 bits (637), Expect = 8e-64
 Identities = 146/287 (50%), Positives = 178/287 (62%), Gaps = 23/287 (8%)
 Frame = +3

Query: 411  MKKYGLQLRI--QQQNRQPIGPPVLCAAGFGXXXXXXXXXXXIARQATKKKVLKDIEEQH 584
            MKKYGLQLR+   QQ +QP  PP+    GF            I+RQA+K K LKDIEEQH
Sbjct: 1    MKKYGLQLRVPPSQQKKQPTRPPLPPPLGF-CDENEDDIEREISRQASKNKTLKDIEEQH 59

Query: 585  KKALEEDPSVFDYDGVYEQMKEVAVRPLAQDRQERKSKYIERLMVKAKEREREHEVIYER 764
            KKALEEDP+ FDYD VYE+MKE  +RPLAQDRQERK KYI++L+ KAK+REREHE+IYE+
Sbjct: 60   KKALEEDPTAFDYDDVYEEMKEKTIRPLAQDRQERKPKYIQKLIEKAKQREREHEIIYEK 119

Query: 765  KLAKERSKDEHLFADKDKFITSAYKRKLAEQEKWXXXXXXXXXXXXKDDVTKKSDISEFY 944
            KL KERSKD+ L+ADKDKFIT AYK+KLAEQ KW            KDDVTKKSD+S+FY
Sbjct: 120  KLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDFY 179

Query: 945  FNLSKNVAFGANASESGGQAKQEEKTVVPRIDSPSNS---------------------GK 1061
            +NLSKNVAFG   ++     K+EEK      +  S+S                     GK
Sbjct: 180  YNLSKNVAFGGIEAK---LRKREEKVDADTSEKGSSSTNTHTDSSVINEGHEGHEGHEGK 236

Query: 1062 MVVRDQADSDSLNVIAEVNITTGQGNFVAEEELPSAVDKKKQDHHNK 1202
                 +  S SL+ I  V+  + Q   +AEE L     + K DHH +
Sbjct: 237  TSTPSKESSQSLD-IKPVSDASAQEKALAEETL---AQQPKSDHHKR 279


>emb|CBI28266.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  244 bits (623), Expect = 3e-62
 Identities = 130/217 (59%), Positives = 155/217 (71%), Gaps = 2/217 (0%)
 Frame = +3

Query: 411  MKKYGLQLRI--QQQNRQPIGPPVLCAAGFGXXXXXXXXXXXIARQATKKKVLKDIEEQH 584
            MKKYGLQLR+   QQ +QP  PP+    GF            I+RQA+K K LKDIEEQH
Sbjct: 1    MKKYGLQLRVPPSQQKKQPTRPPLPPPLGF-CDENEDDIEREISRQASKNKTLKDIEEQH 59

Query: 585  KKALEEDPSVFDYDGVYEQMKEVAVRPLAQDRQERKSKYIERLMVKAKEREREHEVIYER 764
            KKALEEDP+ FDYD VYE+MKE  +RPLAQDRQERK KYI++L+ KAK+REREHE+IYE+
Sbjct: 60   KKALEEDPTAFDYDDVYEEMKEKTIRPLAQDRQERKPKYIQKLIEKAKQREREHEIIYEK 119

Query: 765  KLAKERSKDEHLFADKDKFITSAYKRKLAEQEKWXXXXXXXXXXXXKDDVTKKSDISEFY 944
            KL KERSKD+ L+ADKDKFIT AYK+KLAEQ KW            KDDVTKKSD+S+FY
Sbjct: 120  KLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDFY 179

Query: 945  FNLSKNVAFGANASESGGQAKQEEKTVVPRIDSPSNS 1055
            +NLSKNVAFG   ++     K+EEK      +  S+S
Sbjct: 180  YNLSKNVAFGGIEAK---LRKREEKVDADTSEKGSSS 213


>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
            gi|223536956|gb|EEF38594.1| Coiled-coil domain-containing
            protein, putative [Ricinus communis]
          Length = 327

 Score =  242 bits (618), Expect = 1e-61
 Identities = 144/304 (47%), Positives = 182/304 (59%), Gaps = 36/304 (11%)
 Frame = +3

Query: 399  AEDNMKKYGLQLRI--QQQNRQPIGP--PVLCAAGFGXXXXXXXXXXXIARQATKKKVLK 566
            +E   +KYGLQLR+  QQQ ++P  P  P+L    FG           I+R A+K K LK
Sbjct: 9    SEMQQQKYGLQLRVKPQQQAKKPPLPTKPLL----FGQDEDDDNVEKEISRHASKNKSLK 64

Query: 567  DIEEQHKKALEEDPSVFDYDGVYEQMKEVAVRPLAQDRQERKSKYIERLMVKAKEREREH 746
            DIEE HKKALEEDPS FDYDGVY+ MK+   +P  QDRQERK KYIE LM KA+ R+REH
Sbjct: 65   DIEEMHKKALEEDPSAFDYDGVYDDMKQKVAQPRHQDRQERKPKYIEALMKKAEIRQREH 124

Query: 747  EVIYERKLAKERSKDEHLFADKDKFITSAYKRKLAEQEKWXXXXXXXXXXXXKDDVTKKS 926
            E+IYE+KL KER+KD+HL+ADKDKF+TSAYK+KLAEQ KW            KDDVTKKS
Sbjct: 125  EIIYEKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEERLRQLKEEKDDVTKKS 184

Query: 927  DISEFYFNLSKNVAFGANASESGGQAKQEEKTVVPRID---SPSNSGK------------ 1061
            D+S+FYFNL KNVAFGA   +S  Q KQ E     ++D   + S SG+            
Sbjct: 185  DLSDFYFNLGKNVAFGAKEIDSRKQEKQTELRKSEKLDDEAAGSTSGRGRPLPDSKSIME 244

Query: 1062 ----------------MVVRDQADSDSLNVIAEVNITTG-QGNFVAEEELPSAVDKKKQD 1190
                            ++ R  ++S  +N ++E  + T  Q N   EE L    ++ KQD
Sbjct: 245  SSRVNEEHHDGTSPVPILPRRNSESSDVNPVSERKVDTSVQENTATEEPL---ANQPKQD 301

Query: 1191 HHNK 1202
            HH +
Sbjct: 302  HHKR 305


>ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|222849233|gb|EEE86780.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  239 bits (609), Expect = 1e-60
 Identities = 126/212 (59%), Positives = 154/212 (72%)
 Frame = +3

Query: 411  MKKYGLQLRIQQQNRQPIGPPVLCAAGFGXXXXXXXXXXXIARQATKKKVLKDIEEQHKK 590
            MKKYGL LR Q Q ++P  PP   A GFG           I+RQA K K LKDIEEQHKK
Sbjct: 1    MKKYGLLLR-QPQQKKPPRPPPPTALGFGDDDEDDVEKE-ISRQAAKNKSLKDIEEQHKK 58

Query: 591  ALEEDPSVFDYDGVYEQMKEVAVRPLAQDRQERKSKYIERLMVKAKEREREHEVIYERKL 770
            ALEEDPSVFDYDGVY++MK+   +P A DRQ+R+SKYI+ LM KA+ER+R+H+VI+E+ L
Sbjct: 59   ALEEDPSVFDYDGVYDEMKQKIAQPKALDRQKRESKYIKTLMGKAEERKRQHDVIFEKNL 118

Query: 771  AKERSKDEHLFADKDKFITSAYKRKLAEQEKWXXXXXXXXXXXXKDDVTKKSDISEFYFN 950
            AKERSK++HLFADKDKF+T+AYKRKLAEQEKW            K+DVTKKSD+S+FYFN
Sbjct: 119  AKERSKEDHLFADKDKFVTAAYKRKLAEQEKWMEEERLRELREEKEDVTKKSDLSDFYFN 178

Query: 951  LSKNVAFGANASESGGQAKQEEKTVVPRIDSP 1046
            L KNVA GA    S  Q KQ+++T   + + P
Sbjct: 179  LGKNVALGAKDLLSKKQEKQDKQTEFRKPEKP 210


>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
            [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
            PREDICTED: nuclear speckle splicing regulatory protein
            1-like [Cucumis sativus]
          Length = 322

 Score =  236 bits (601), Expect = 1e-59
 Identities = 124/202 (61%), Positives = 147/202 (72%), Gaps = 2/202 (0%)
 Frame = +3

Query: 411  MKKYGLQLRIQ-QQNRQPIGPPVLCAAGFGXXXXXXXXXXXIARQATKKKVLKDIEEQHK 587
            M KYGLQLR++  Q +QP  PP+    GF            I+RQA+K K LKDIEEQHK
Sbjct: 1    MSKYGLQLRVKPSQQKQPTRPPLPAPLGF-QDDDDDDVEREISRQASKNKALKDIEEQHK 59

Query: 588  KALEEDPSVFDYDGVYEQMKEVAVRPLAQDRQERKSKYIERLMVKAKEREREHEVIYERK 767
            KALEEDPSVFDYDGVY++MKE  V+P A DR+ERK KYI+ LM KA+ERERE E+IYERK
Sbjct: 60   KALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERK 119

Query: 768  LAKERSKDEHLFADKDKFITSAYKRKLAEQEKWXXXXXXXXXXXXKDDVTKKSDISEFYF 947
            LAKERSKD+HL+A KDKF+T AYK+KLAEQ KW            K+DVTKKSD+S+FYF
Sbjct: 120  LAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYF 179

Query: 948  NLSKNVAFGA-NASESGGQAKQ 1010
            +L KNVA+GA NA E     K+
Sbjct: 180  SLQKNVAYGARNAIEPTAPPKK 201


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