BLASTX nr result

ID: Cimicifuga21_contig00007067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007067
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882074.1| hypothetical protein ARALYDRAFT_483814 [Arab...    92   8e-17
ref|NP_566079.1| uncharacterized protein [Arabidopsis thaliana] ...    92   1e-16
gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]                  90   4e-16
ref|XP_002302638.1| predicted protein [Populus trichocarpa] gi|1...    90   4e-16
ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785...    89   5e-16

>ref|XP_002882074.1| hypothetical protein ARALYDRAFT_483814 [Arabidopsis lyrata subsp.
           lyrata] gi|297327913|gb|EFH58333.1| hypothetical protein
           ARALYDRAFT_483814 [Arabidopsis lyrata subsp. lyrata]
          Length = 65

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = +1

Query: 52  MAIMEKLRMFVAQEPVVAVSCLMASVGLFLPAVVRPILDSFEASKKEQQPALTDVVAGM 228
           M IMEKLRMFVAQEPVVA SCL+  VGLFLPAVVRPILDS EASK+ + P LTDV+AG+
Sbjct: 1   MPIMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGV 59


>ref|NP_566079.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15215610|gb|AAK91350.1| F11C10.23/F11C10.23
           [Arabidopsis thaliana] gi|20197774|gb|AAD20165.2|
           expressed protein [Arabidopsis thaliana]
           gi|20334882|gb|AAM16197.1| At2g46540/F11C10.23
           [Arabidopsis thaliana] gi|21554416|gb|AAM63521.1|
           unknown [Arabidopsis thaliana]
           gi|330255624|gb|AEC10718.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 65

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 52  MAIMEKLRMFVAQEPVVAVSCLMASVGLFLPAVVRPILDSFEASKKEQQPALTDVVAGM 228
           M +MEKLRMFVAQEPVVA SCL+  VGLFLPAVVRPILDS EASK+ + P LTDV+AG+
Sbjct: 1   MPVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGV 59


>gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]
          Length = 65

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = +1

Query: 52  MAIMEKLRMFVAQEPVVAVSCLMASVGLFLPAVVRPILDSFEASKKEQQPALTDVVAGM 228
           MA+M KLRMFV QEPVVA SCL+A  GLFLPAVVRPILDSFE+SK+   P L+DVVAGM
Sbjct: 1   MAVMGKLRMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPAPPLSDVVAGM 59


>ref|XP_002302638.1| predicted protein [Populus trichocarpa] gi|118482840|gb|ABK93335.1|
           unknown [Populus trichocarpa]
           gi|222844364|gb|EEE81911.1| predicted protein [Populus
           trichocarpa]
          Length = 67

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/61 (73%), Positives = 53/61 (86%), Gaps = 2/61 (3%)
 Frame = +1

Query: 52  MAIMEKLRMFVAQEPVVAVSCLMASVGLFLPAVVRPILDSFEASK--KEQQPALTDVVAG 225
           M +MEKLRMFVAQEPVVA SCL+A +GLFLPAVVRPILDS E SK   E+QP+++DV+AG
Sbjct: 1   MPVMEKLRMFVAQEPVVAASCLIAGIGLFLPAVVRPILDSLEGSKHVPEKQPSISDVLAG 60

Query: 226 M 228
           M
Sbjct: 61  M 61


>ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785256 [Glycine max]
           gi|356573241|ref|XP_003554771.1| PREDICTED:
           uncharacterized protein LOC100795854 isoform 1 [Glycine
           max] gi|356573243|ref|XP_003554772.1| PREDICTED:
           uncharacterized protein LOC100795854 isoform 2 [Glycine
           max]
          Length = 63

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/59 (71%), Positives = 52/59 (88%)
 Frame = +1

Query: 52  MAIMEKLRMFVAQEPVVAVSCLMASVGLFLPAVVRPILDSFEASKKEQQPALTDVVAGM 228
           MA+ME+L+MFV QEPVVA SCL+A  GLFLPA VRP+LDS++A+K+  QPAL+DVVAGM
Sbjct: 1   MAVMERLKMFVVQEPVVAASCLIAGFGLFLPAFVRPMLDSYQATKQPPQPALSDVVAGM 59


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