BLASTX nr result

ID: Cimicifuga21_contig00007055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007055
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica]         72   1e-10
ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo...    72   1e-10
emb|CBI15104.3| unnamed protein product [Vitis vinifera]               70   3e-10
emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife...    70   3e-10
ref|XP_002283896.1| PREDICTED: transcription factor MYB1R1-like ...    68   2e-09

>dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica]
          Length = 255

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 58/164 (35%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
 Frame = +2

Query: 2   QKYFLXXXXXXXXXXXSSLFDITTE-----EEIVPHDPIPLQSPLSMPT---FSLSLGP- 154
           QKYFL           SSLFDITT+     EE V  +P P QSP  M     FS+S  P 
Sbjct: 100 QKYFLRKNNQNRRRRRSSLFDITTDTYMVDEESVQQEPTP-QSPQEMSCNLGFSMSTNPV 158

Query: 155 -------ENSTIVQGDSTTNMATKVIRPTPVLPIPPTSRMAGLNLNKKSTGEDXXXXXXX 313
                    + + Q D    +   ++RP PV+P P  SRM  L+LN+K T +        
Sbjct: 159 PISPVLFSENHMEQSDFIA-IPANIVRPIPVIPTPQASRMVDLDLNQKCTMD-----PSA 212

Query: 314 XXXXXXXXXHQDSPSRHSAFQVMSTNFSSPGDLDSNGGNIISVA 445
                     + + SRHSAFQ M  + S+  ++D   GN+ISVA
Sbjct: 213 LSLQLSNSFEKQTSSRHSAFQAM-LSLSTGNNVDCGSGNMISVA 255


>ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera]
          Length = 288

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 60/167 (35%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
 Frame = +2

Query: 2   QKYFLXXXXXXXXXXXSSLFDITTE--------EEIVPHD----PIPLQSPLS------- 124
           QKYFL           SSLFDIT +        EE   H     P  L S L+       
Sbjct: 129 QKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEEDQVHQETVSPPQLHSHLNGSAGGFP 188

Query: 125 MPTFSLSLGPENSTIVQGDSTTNMATKVIRPTPVLPIPPTSRMAGLNLNKKSTGEDXXXX 304
           +PTF +++ P   T+ Q +      TK+IRP P+LP+PP+S+MA LNLN  ST +     
Sbjct: 189 VPTFPVTMAPI-LTLGQSNQAKG-PTKLIRPIPILPVPPSSKMADLNLNIPSTADPLPLS 246

Query: 305 XXXXXXXXXXXXHQDSPSRHSAFQVMSTNFSSPGDLDSNGGNIISVA 445
                          +    SAFQ MS +F+S     S G NIISVA
Sbjct: 247 LKPSSSTSTSPQSPTATRHSSAFQAMSESFNS-----STGDNIISVA 288


>emb|CBI15104.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 60/157 (38%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
 Frame = +2

Query: 2   QKYFLXXXXXXXXXXXSSLFDITTE---------EEIVPHDPIPLQSPLSMPTFSLSLGP 154
           QKYFL           SSLFDITTE         E+++ H     QS  S  TFS     
Sbjct: 123 QKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQVLHHQENTSQSQQSPKTFS----- 177

Query: 155 ENSTIVQGDSTTNMATKVIRPTPVLPIPPTSRMAGLNLNKKSTGEDXXXXXXXXXXXXXX 334
              T   G +  N  T+++RP PVLPIPP S    LNLN KS+ +               
Sbjct: 178 --ETGSGGQNDVN--TRLVRPIPVLPIPPES--TDLNLNLKSSVD--PSPLSLKLSLSSN 229

Query: 335 XXHQDSPSRHSAFQVMSTNFSSPGDLDSNGGNIISVA 445
             H + PSRHSAFQ MS+         +NG +IISVA
Sbjct: 230 QNHPNQPSRHSAFQAMSS--------FNNGDSIISVA 258


>emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera]
           gi|296086475|emb|CBI32064.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 61/177 (34%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
 Frame = +2

Query: 2   QKYFLXXXXXXXXXXXSSLFDITTE--------EEIVPHD----PIPLQSPLS------- 124
           QKYFL           SSLFDIT +        EE   H     P  L S L+       
Sbjct: 129 QKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEEDQVHQETVSPPQLHSHLNGSAGGFP 188

Query: 125 MPTFSLSLGPENSTIVQGDST-------TNMA---TKVIRPTPVLPIPPTSRMAGLNLNK 274
           +PTF +++ P    +    S        +N A   TK+IRP P+LP+PP+S+MA LNLN 
Sbjct: 189 VPTFPVTMAPVVLPVASNGSMEILTLGQSNQAKGPTKLIRPIPILPVPPSSKMADLNLNI 248

Query: 275 KSTGEDXXXXXXXXXXXXXXXXHQDSPSRHSAFQVMSTNFSSPGDLDSNGGNIISVA 445
            ST +                    +    SAFQ MS +F+S     S G NIISVA
Sbjct: 249 PSTADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAMSESFNS-----STGDNIISVA 300


>ref|XP_002283896.1| PREDICTED: transcription factor MYB1R1-like [Vitis vinifera]
          Length = 323

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 62/183 (33%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
 Frame = +2

Query: 2   QKYFLXXXXXXXXXXXSSLFDITTE---------EEIVPHDPIPLQSPLS---------- 124
           QKYFL           SSLFDITTE         E+++ H     QS  S          
Sbjct: 157 QKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQVLHHQENTSQSQQSPKTFSETGSG 216

Query: 125 -----MPTFSLSLGP-----------ENSTIVQGDSTTNMATKVIRPTPVLPIPPTSRMA 256
                +P F + + P           EN T+ Q D    + T+++RP PVLPIPP S   
Sbjct: 217 GGFPVVPAFPMPINPVVVPVPIQNPMENLTLGQND----VNTRLVRPIPVLPIPPES--T 270

Query: 257 GLNLNKKSTGEDXXXXXXXXXXXXXXXXHQDSPSRHSAFQVMSTNFSSPGDLDSNGGNII 436
            LNLN KS+ +                 H + PSRHSAFQ MS+         +NG +II
Sbjct: 271 DLNLNLKSSVD--PSPLSLKLSLSSNQNHPNQPSRHSAFQAMSS--------FNNGDSII 320

Query: 437 SVA 445
           SVA
Sbjct: 321 SVA 323


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