BLASTX nr result

ID: Cimicifuga21_contig00007026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007026
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    82   8e-14
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    82   1e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    81   1e-13
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/103 (41%), Positives = 58/103 (56%)
 Frame = -1

Query: 528 YSTVGFTILKLDTVSLGWTEVNTLGGRILFLGDXXXXXXXXSDMPGCKPNSIYFTDDYHE 349
           Y T  F + +LD+ +  W  V++LG R LFLG+         D PGCK N IY+TDDY E
Sbjct: 285 YRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 348 GYFYEDQLGPHDMGVFNLEDRSIEPHYPMESSMIVPAPIFIQP 220
              Y+   G  D+G+FNLED SIEP       +  P P+++ P
Sbjct: 345 DN-YDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
 Frame = -1

Query: 528 YSTVGFTILKLDTVSLGWTEVNTLGGRILFLGDXXXXXXXXSDMPGCKPNSIYFTDDYHE 349
           Y TVGF + K++   L W  V TLG R+LF+G         SD  GC  + IYFTDDY E
Sbjct: 285 YRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE 344

Query: 348 GYFYEDQLGPHDMGVFNLEDRSIEP----HYPMESSMIVPAPIFIQP 220
               +D  G HD+GVF L D+SIEP    +    S +  P PI++ P
Sbjct: 345 SN-DDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSP 390


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/103 (41%), Positives = 57/103 (55%)
 Frame = -1

Query: 528 YSTVGFTILKLDTVSLGWTEVNTLGGRILFLGDXXXXXXXXSDMPGCKPNSIYFTDDYHE 349
           Y T  F + +LD  +  W  V++LG R LFLG+         D PGCK N IY+TDDY E
Sbjct: 285 YRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 348 GYFYEDQLGPHDMGVFNLEDRSIEPHYPMESSMIVPAPIFIQP 220
              Y+   G  D+G+FNLED SIEP       +  P P+++ P
Sbjct: 345 DN-YDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/103 (35%), Positives = 58/103 (56%)
 Frame = -1

Query: 528 YSTVGFTILKLDTVSLGWTEVNTLGGRILFLGDXXXXXXXXSDMPGCKPNSIYFTDDYHE 349
           Y T+ F + ++D     W  + +L  + +F+G          D+PGC+ NS+YFTDDY E
Sbjct: 357 YRTLLFGLFRMDFDKETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWE 416

Query: 348 GYFYEDQLGPHDMGVFNLEDRSIEPHYPMESSMIVPAPIFIQP 220
               +   G HDMGVFNL+D+S++  Y +++  I P P +  P
Sbjct: 417 RMNEDYLYGGHDMGVFNLKDKSVKHFYQLDALKIQPPPCWFLP 459


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = -1

Query: 543 YDPSNYSTVGFTILKLDTVSLGWTEVNTLGGRILFLGDXXXXXXXXSDMPGCKPNSIYFT 364
           +D   Y T  F + KLD     W  V +LG  +LF+G+        S + GC  + IY+T
Sbjct: 280 FDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYT 339

Query: 363 DDYHEGYFYEDQLGPHDMGVFNLEDRSIE--PHYPME--SSMIVPAPIFIQP 220
           DDY     Y+  +G HD+G+F L D SIE  P YP    S +  P P++I P
Sbjct: 340 DDYSANN-YDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISP 390


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