BLASTX nr result

ID: Cimicifuga21_contig00006991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006991
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34146.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein lig...   151   6e-35
ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002510629.1| guanine nucleotide exchange factor P532, put...   142   3e-32
ref|NP_200895.2| regulator of chromosome condensation repeat-con...   139   2e-31

>emb|CBI34146.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/110 (66%), Positives = 80/110 (72%)
 Frame = +1

Query: 1   ELGRGDKVGGWKPQPIPSLQDVRISQIACGGFHSLALTDEGKILSWXXXXXXXXXXSSIQ 180
           ELGRGDKVGGWKPQPIPSLQDVRI QIA GG+HSLALTD+GK+LSW          SSI+
Sbjct: 176 ELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIE 235

Query: 181 NLKAPMVVEALADERIVYXXXXXXXXXXXXDKGKLYMWGNAKDFQLGVPG 330
           N K P V+EALADE ++Y            D GKLYMWGNAKD QLGVPG
Sbjct: 236 NQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPG 285


>ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/110 (66%), Positives = 80/110 (72%)
 Frame = +1

Query: 1   ELGRGDKVGGWKPQPIPSLQDVRISQIACGGFHSLALTDEGKILSWXXXXXXXXXXSSIQ 180
           ELGRGDKVGGWKPQPIPSLQDVRI QIA GG+HSLALTD+GK+LSW          SSI+
Sbjct: 281 ELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIE 340

Query: 181 NLKAPMVVEALADERIVYXXXXXXXXXXXXDKGKLYMWGNAKDFQLGVPG 330
           N K P V+EALADE ++Y            D GKLYMWGNAKD QLGVPG
Sbjct: 341 NQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPG 390


>ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|222873761|gb|EEF10892.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/110 (60%), Positives = 79/110 (71%)
 Frame = +1

Query: 1   ELGRGDKVGGWKPQPIPSLQDVRISQIACGGFHSLALTDEGKILSWXXXXXXXXXXSSIQ 180
           ELGRGDKVGGW+P+PIPSL+D RI QIA GG+H LALTDEGK+LSW          SSIQ
Sbjct: 169 ELGRGDKVGGWRPKPIPSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGHSSIQ 228

Query: 181 NLKAPMVVEALADERIVYXXXXXXXXXXXXDKGKLYMWGNAKDFQLGVPG 330
           + K P V++ALAD+ ++Y            DKGKLYMWGNAKD QLG+PG
Sbjct: 229 SQKIPAVIDALADQHVIYIACGGSSSAAITDKGKLYMWGNAKDSQLGIPG 278


>ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis] gi|223551330|gb|EEF52816.1| guanine nucleotide
           exchange factor P532, putative [Ricinus communis]
          Length = 450

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/110 (60%), Positives = 80/110 (72%)
 Frame = +1

Query: 1   ELGRGDKVGGWKPQPIPSLQDVRISQIACGGFHSLALTDEGKILSWXXXXXXXXXXSSIQ 180
           ELGRG+K GGW+P+PIP+L+ VR+ QIA GG+HSLALTDEGK+LSW           SIQ
Sbjct: 297 ELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQ 356

Query: 181 NLKAPMVVEALADERIVYXXXXXXXXXXXXDKGKLYMWGNAKDFQLGVPG 330
           N K PMV++ALAD+R+VY            D+GKLYMWGNAKD QLGVPG
Sbjct: 357 NQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPG 406


>ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|10176914|dbj|BAB10107.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010005|gb|AED97388.1| regulator of chromosome
           condensation repeat-containing protein [Arabidopsis
           thaliana]
          Length = 445

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/110 (58%), Positives = 80/110 (72%)
 Frame = +1

Query: 1   ELGRGDKVGGWKPQPIPSLQDVRISQIACGGFHSLALTDEGKILSWXXXXXXXXXXSSIQ 180
           ELGRGD +GGW+P P+PSL+ VRI+QIACGG+HSLALT+EGK+LSW          SS++
Sbjct: 293 ELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLR 352

Query: 181 NLKAPMVVEALADERIVYXXXXXXXXXXXXDKGKLYMWGNAKDFQLGVPG 330
           N K P  +EALAD++IV+            D G+L+MWGNAKDFQLGVPG
Sbjct: 353 NQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPG 402


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