BLASTX nr result

ID: Cimicifuga21_contig00006988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006988
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245...   232   9e-59
ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254...   210   5e-54
gb|ACG43637.1| hypothetical protein [Zea mays]                        198   9e-52
ref|XP_002299754.1| predicted protein [Populus trichocarpa] gi|1...   208   2e-51
gb|AFW87196.1| hypothetical protein ZEAMMB73_642213 [Zea mays]        197   2e-51

>ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245670 [Vitis vinifera]
           gi|297738963|emb|CBI28208.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  232 bits (592), Expect = 9e-59
 Identities = 107/160 (66%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
 Frame = +3

Query: 222 MHGCRGCLGCCTEPRPIISVDEPSKGLRVRGQTVKKPSISEDFWSTSTCEMDNSAVPXXX 401
           MHG RGCLGCCT+P PII+VDEPSKGLR++G+TVKKPSISEDFWSTSTCE+DNS V    
Sbjct: 1   MHGSRGCLGCCTKPTPIIAVDEPSKGLRIQGRTVKKPSISEDFWSTSTCEIDNSTVQSQR 60

Query: 402 XXXXXXXXXXXDPH-SGSSSTSNPPEYVNHGLLLWNQTRQQWLGNKRRQSKTQKVQEPKL 578
                        H SG  STSN  E++NHGLLLWNQTR QW+GNKR ++++Q+++EP+L
Sbjct: 61  SISSISTSNQSLTHYSGIGSTSNNSEFINHGLLLWNQTRLQWVGNKRSENQSQQIREPRL 120

Query: 579 SWNATYDSLLGTNKAFPQAIPLTEMVDFLVDVWEQEGMYD 698
            WNATY+ LLGTN+ F Q IPL+EM+DFLVDVWEQEGMYD
Sbjct: 121 RWNATYEGLLGTNRRFSQPIPLSEMIDFLVDVWEQEGMYD 160


>ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254371 isoform 1 [Vitis
           vinifera]
          Length = 173

 Score =  210 bits (534), Expect(2) = 5e-54
 Identities = 101/155 (65%), Positives = 118/155 (76%), Gaps = 1/155 (0%)
 Frame = +3

Query: 237 GCLGCCTEPRPIISVDEPSKGLRVRGQTVKKPSISEDFWSTSTCEMDNSAVPXXXXXXXX 416
           GCLGCC++P  II V E  KGL ++G+T  +PS  EDFWSTST EMDNSAV         
Sbjct: 20  GCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGEMDNSAVQSQGSISSI 79

Query: 417 XXXXXX-DPHSGSSSTSNPPEYVNHGLLLWNQTRQQWLGNKRRQSKTQKVQEPKLSWNAT 593
                  DPHS + STSNPPE+VNHGLLLWNQTRQQW+GN++ Q++ Q VQEP++SWNAT
Sbjct: 80  STSNQTFDPHSNAGSTSNPPEFVNHGLLLWNQTRQQWIGNQKSQNRKQ-VQEPRISWNAT 138

Query: 594 YDSLLGTNKAFPQAIPLTEMVDFLVDVWEQEGMYD 698
           Y+SLLGTNK  PQ IPL EMVDFLVDVWEQEG+YD
Sbjct: 139 YESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD 173



 Score = 28.5 bits (62), Expect(2) = 5e-54
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 175 MLYCRSVSAWIRRVVECMG 231
           M  CRSV +WI  +V CMG
Sbjct: 1   MQICRSVPSWICHIVACMG 19


>gb|ACG43637.1| hypothetical protein [Zea mays]
          Length = 174

 Score =  198 bits (504), Expect(2) = 9e-52
 Identities = 90/154 (58%), Positives = 113/154 (73%)
 Frame = +3

Query: 237 GCLGCCTEPRPIISVDEPSKGLRVRGQTVKKPSISEDFWSTSTCEMDNSAVPXXXXXXXX 416
           GC GCC +P PII+VDEPSK LR++G++V+K S+SEDFWSTS  EM+NS +         
Sbjct: 21  GCFGCCAKPTPIIAVDEPSKRLRIQGRSVRKASLSEDFWSTSAHEMENSGIQSQRSMSSI 80

Query: 417 XXXXXXDPHSGSSSTSNPPEYVNHGLLLWNQTRQQWLGNKRRQSKTQKVQEPKLSWNATY 596
                      S S SNP E++N GL+LWNQTRQQW+G+K+R S++Q+ +EPKLSWN TY
Sbjct: 81  STLAQSSDQHASGSCSNPNEFMNQGLMLWNQTRQQWVGSKKRHSRSQQPREPKLSWNTTY 140

Query: 597 DSLLGTNKAFPQAIPLTEMVDFLVDVWEQEGMYD 698
           +SLLG+NK F Q IPL EMVD LVD WEQEG+YD
Sbjct: 141 ESLLGSNKPFSQPIPLGEMVDLLVDAWEQEGLYD 174



 Score = 32.3 bits (72), Expect(2) = 9e-52
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +1

Query: 175 MLYCRSVSAWIRRVVECMG 231
           +L CR++S W+RR+V CMG
Sbjct: 2   LLSCRTLSTWVRRLVACMG 20


>ref|XP_002299754.1| predicted protein [Populus trichocarpa] gi|118485078|gb|ABK94402.1|
           unknown [Populus trichocarpa]
           gi|222847012|gb|EEE84559.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  208 bits (529), Expect = 2e-51
 Identities = 102/160 (63%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
 Frame = +3

Query: 222 MHGCRGCLGCCTEPRPIISVDEPSKGLRVRGQTVKKPSISEDFWSTSTCEMDNSAVPXXX 401
           MHG  GCLGC  +P  I SV E SKG +V+ +TVKKPSISEDFW+TSTC+MD SAV    
Sbjct: 1   MHGSSGCLGCYNKPTLITSVGEQSKGPKVKCETVKKPSISEDFWTTSTCDMDYSAVQSQG 60

Query: 402 XXXXXXXXXXX-DPHSGSSSTSNPPEYVNHGLLLWNQTRQQWLGNKRRQSKTQKVQEPKL 578
                       D H GS S +N  E+VNHGLLLWNQTR  W+GNKR  ++ Q  QEPKL
Sbjct: 61  SISSISIANQTLDQHGGSGSINNVSEFVNHGLLLWNQTRHCWVGNKRSGNEEQLPQEPKL 120

Query: 579 SWNATYDSLLGTNKAFPQAIPLTEMVDFLVDVWEQEGMYD 698
           +WNATY+SLLG+NK FPQ IPLTEMVDFLVD+WEQEGMYD
Sbjct: 121 NWNATYESLLGSNKPFPQPIPLTEMVDFLVDIWEQEGMYD 160


>gb|AFW87196.1| hypothetical protein ZEAMMB73_642213 [Zea mays]
          Length = 174

 Score =  197 bits (501), Expect(2) = 2e-51
 Identities = 89/154 (57%), Positives = 114/154 (74%)
 Frame = +3

Query: 237 GCLGCCTEPRPIISVDEPSKGLRVRGQTVKKPSISEDFWSTSTCEMDNSAVPXXXXXXXX 416
           GC GCC +P PII+VDEPSK LR++G++V+K S+SEDFWSTS  EM+NS +         
Sbjct: 21  GCFGCCAKPTPIIAVDEPSKRLRIQGRSVRKASLSEDFWSTSAHEMENSGIQSQRSMSSI 80

Query: 417 XXXXXXDPHSGSSSTSNPPEYVNHGLLLWNQTRQQWLGNKRRQSKTQKVQEPKLSWNATY 596
                      + S+SNP E++N GL+LWNQTRQQW+G+K+R S++Q+ +EPKLSWN TY
Sbjct: 81  STLAQSSDQHTAGSSSNPNEFMNQGLMLWNQTRQQWVGSKKRHSRSQQPREPKLSWNTTY 140

Query: 597 DSLLGTNKAFPQAIPLTEMVDFLVDVWEQEGMYD 698
           +SLLG+NK F Q IPL EMVD LVD WEQEG+YD
Sbjct: 141 ESLLGSNKPFSQPIPLGEMVDLLVDAWEQEGLYD 174



 Score = 32.3 bits (72), Expect(2) = 2e-51
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +1

Query: 175 MLYCRSVSAWIRRVVECMG 231
           +L CR++S W+RR+V CMG
Sbjct: 2   LLSCRTLSTWVRRLVACMG 20


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