BLASTX nr result

ID: Cimicifuga21_contig00006982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006982
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321301.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-35
ref|XP_004173151.1| PREDICTED: WD repeat-containing protein 26-l...   107   5e-35
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi...   109   1e-34
ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-l...   107   4e-34
ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [...   100   5e-34

>ref|XP_002321301.1| predicted protein [Populus trichocarpa] gi|222862074|gb|EEE99616.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  107 bits (268), Expect(2) = 3e-35
 Identities = 49/59 (83%), Positives = 52/59 (88%)
 Frame = -2

Query: 402 GSENSQVYIWNRRNQKPIEVLTGHSMTVNCVSWNPSRPQMLASASDDQTIRIWGPSGNK 226
           GSENSQVYIWNRRN +PIEVL+GH MTVNCV WNP R QMLASASDD TIRIWGPS +K
Sbjct: 196 GSENSQVYIWNRRNSRPIEVLSGHLMTVNCVCWNPKRHQMLASASDDHTIRIWGPSRSK 254



 Score = 66.6 bits (161), Expect(2) = 3e-35
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = -3

Query: 590 AGTGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQ 471
           AG   KPLKY GH+Q KYVIRSCFGG+D  FIASGSENSQ
Sbjct: 162 AGKWKKPLKYIGHQQHKYVIRSCFGGLDSSFIASGSENSQ 201


>ref|XP_004173151.1| PREDICTED: WD repeat-containing protein 26-like, partial [Cucumis
           sativus]
          Length = 224

 Score =  107 bits (267), Expect(2) = 5e-35
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -2

Query: 402 GSENSQVYIWNRRNQKPIEVLTGHSMTVNCVSWNPSRPQMLASASDDQTIRIWGPSGNK 226
           GSENS+VYIW+R + KPIEVL+GHS TVNCVSWNP RP+MLASASDDQTIRIWGP+ +K
Sbjct: 159 GSENSEVYIWSRHSSKPIEVLSGHSTTVNCVSWNPKRPKMLASASDDQTIRIWGPTSSK 217



 Score = 66.2 bits (160), Expect(2) = 5e-35
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 590 AGTGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQ 471
           AG   +PLKYTGH+Q KYVIRSCFGGV+  FIASGSENS+
Sbjct: 125 AGEWQQPLKYTGHQQNKYVIRSCFGGVNSAFIASGSENSE 164


>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
           gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 523

 Score =  109 bits (273), Expect(2) = 1e-34
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = -2

Query: 402 GSENSQVYIWNRRNQKPIEVLTGHSMTVNCVSWNPSRPQMLASASDDQTIRIWGPSGNK 226
           GSENSQVYIWNR+N +PIEVL+GH MTVNCVSWNP R QMLASASDDQTIRIWGPS +K
Sbjct: 457 GSENSQVYIWNRQNSRPIEVLSGHLMTVNCVSWNPRRHQMLASASDDQTIRIWGPSQSK 515



 Score = 62.4 bits (150), Expect(2) = 1e-34
 Identities = 29/40 (72%), Positives = 32/40 (80%)
 Frame = -3

Query: 590 AGTGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQ 471
           AG   K L+Y GHKQ KYVIRSCFGG++  FIASGSENSQ
Sbjct: 423 AGNWEKALRYMGHKQHKYVIRSCFGGLNSSFIASGSENSQ 462


>ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-like [Glycine max]
          Length = 523

 Score =  107 bits (267), Expect(2) = 4e-34
 Identities = 49/59 (83%), Positives = 52/59 (88%)
 Frame = -2

Query: 402 GSENSQVYIWNRRNQKPIEVLTGHSMTVNCVSWNPSRPQMLASASDDQTIRIWGPSGNK 226
           GSENSQVYIWN RN +P+EVL+GHSMTVNCVSWNP  PQMLASASDD TIRIWGPS  K
Sbjct: 459 GSENSQVYIWNCRNSRPVEVLSGHSMTVNCVSWNPKIPQMLASASDDYTIRIWGPSLQK 517



 Score = 63.2 bits (152), Expect(2) = 4e-34
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = -3

Query: 590 AGTGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQ 471
           AG  +KPL++ GHKQ KYVIRSCFGG++  FIASGSENSQ
Sbjct: 425 AGKWDKPLRFMGHKQHKYVIRSCFGGLNNTFIASGSENSQ 464


>ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 520

 Score =  100 bits (249), Expect(2) = 5e-34
 Identities = 46/56 (82%), Positives = 48/56 (85%)
 Frame = -2

Query: 402 GSENSQVYIWNRRNQKPIEVLTGHSMTVNCVSWNPSRPQMLASASDDQTIRIWGPS 235
           GSENS VYIWNR N  P+EVL+GH MTVNCVSWNP R QMLASASDD TIRIWGPS
Sbjct: 457 GSENSLVYIWNRGNSTPLEVLSGHLMTVNCVSWNPRRHQMLASASDDHTIRIWGPS 512



 Score = 69.7 bits (169), Expect(2) = 5e-34
 Identities = 32/39 (82%), Positives = 32/39 (82%)
 Frame = -3

Query: 590 AGTGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENS 474
           AG   KPLKYTGHKQ KYVIRSCFGG  C FIASGSENS
Sbjct: 423 AGKWEKPLKYTGHKQNKYVIRSCFGGFHCTFIASGSENS 461


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