BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006952
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT98264.1| rar [Malus hupehensis]                                 295   6e-78
ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domai...   285   6e-75
gb|ACU14236.1| unknown [Glycine max]                                  278   1e-72
ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|A...   278   1e-72
ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycin...   276   2e-72

>gb|ACT98264.1| rar [Malus hupehensis]
          Length = 225

 Score =  295 bits (755), Expect = 6e-78
 Identities = 126/199 (63%), Positives = 155/199 (77%), Gaps = 2/199 (1%)
 Frame = -3

Query: 591 EKGTRFRCQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALP 412
           ++   FRCQRIGC+AMF++DDNP+ SC+YHD+GPIFH+G KEWSCCK+RSHDF+LFL LP
Sbjct: 4   QRAALFRCQRIGCNAMFSEDDNPEGSCQYHDSGPIFHBGIKEWSCCKKRSHDFTLFLELP 63

Query: 411 GCKTGKHTIEKPVMTKPVTRKP--SASVSPVNGASSKLDCSRCRQGFFCSEHGSQIKDVN 238
           GCKTGKHT EKPV+ KP  + P  + + +P   ASSK  CSRCRQGFFCSEHG+Q K++ 
Sbjct: 64  GCKTGKHTTEKPVLAKPKPKAPVPAPTAAPATDASSKQSCSRCRQGFFCSEHGAQAKELK 123

Query: 237 SKPLHASPXXXXXXXXXXXNSTASVKKIVDLNVPQMCKNKGCGKTFKEKDNHDTACSYHP 58
           SKP++               ++A  KKIVD+N PQ C NKGC +TFKEKDNH+ ACSYHP
Sbjct: 124 SKPVNVETTPIPESITDDQGTSAPPKKIVDINQPQTCMNKGCDQTFKEKDNHENACSYHP 183

Query: 57  GPAVFHDRMRGWKCCDIHV 1
           GPA+FHDR+RGWKCCD+HV
Sbjct: 184 GPAIFHDRVRGWKCCDVHV 202



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 23/63 (36%), Positives = 33/63 (52%)
 Frame = -3

Query: 570 CQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKH 391
           C   GCD  F + DN +++C YH    IFHD  + W CC     +F  F+++P C  G H
Sbjct: 160 CMNKGCDQTFKEKDNHENACSYHPGPAIFHDRVRGWKCCDVHVKEFDEFMSIPPCTKGWH 219

Query: 390 TIE 382
             +
Sbjct: 220 NAD 222


>ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domain-containing protein
           RAR1-like [Vitis vinifera]
          Length = 219

 Score =  285 bits (729), Expect = 6e-75
 Identities = 129/198 (65%), Positives = 147/198 (74%), Gaps = 1/198 (0%)
 Frame = -3

Query: 591 EKGTRFRCQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALP 412
           E+  + RCQR+GCD MF+ DDNPDDSC+YHD+GP FHDG KEWSCCK+RSHDFSLFLA+P
Sbjct: 3   EQAAKVRCQRMGCDVMFSPDDNPDDSCQYHDSGPFFHDGMKEWSCCKKRSHDFSLFLAIP 62

Query: 411 GCKTGKHTIEKPVMTKPVTRKPSA-SVSPVNGASSKLDCSRCRQGFFCSEHGSQIKDVNS 235
           GCKTGKHT EKPV+ KP   K    + +P   ASSK  CSRC+QGFFCSEHGSQ ++   
Sbjct: 63  GCKTGKHTTEKPVLAKPAPPKNQVPAPAPAPDASSKQTCSRCQQGFFCSEHGSQAREKRL 122

Query: 234 KPLHASPXXXXXXXXXXXNSTASVKKIVDLNVPQMCKNKGCGKTFKEKDNHDTACSYHPG 55
           +    +               A  KKIVD+N PQ C NKGCG TFKEKDNHDTACSYHPG
Sbjct: 123 Q----TDLPAENNTGVQEGLAAPAKKIVDINQPQTCGNKGCGMTFKEKDNHDTACSYHPG 178

Query: 54  PAVFHDRMRGWKCCDIHV 1
           PAVFHDR+RGWKCCDIHV
Sbjct: 179 PAVFHDRLRGWKCCDIHV 196



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = -3

Query: 570 CQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKH 391
           C   GC   F + DN D +C YH    +FHD  + W CC     +F  F+++P C  G H
Sbjct: 154 CGNKGCGMTFKEKDNHDTACSYHPGPAVFHDRLRGWKCCDIHVKEFDEFMSIPPCTKGWH 213


>gb|ACU14236.1| unknown [Glycine max]
          Length = 224

 Score =  278 bits (710), Expect = 1e-72
 Identities = 133/202 (65%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 MEK-GTRFRCQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLA 418
           MEK   + RCQRIGCDAMF++DDNPD  C+YHD+GPIFHDGTKEWSCCK+RSHDFSLFL 
Sbjct: 1   MEKTAVKVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLE 60

Query: 417 LPGCKTGKHTIEKPVMTKPVTRK--PSASVSPVNGASSKLDCSRCRQGFFCSEHGSQIKD 244
           +PGCKTGKHT  K V+T PV +   PS +      ASSK  C RC+QGFFCS+HGSQ K 
Sbjct: 61  IPGCKTGKHTTVKQVIT-PVKKSTMPSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKP 119

Query: 243 VN-SKPLHASPXXXXXXXXXXXNSTASVKKIVDLNVPQMCKNKGCGKTFKEKDNHDTACS 67
            N      A+                  KKIVD+N PQ+CKNKGCG+TFKEKDNHDTACS
Sbjct: 120 ANIIGDKAANLAGDASVDNNSSVHAPKPKKIVDINEPQVCKNKGCGQTFKEKDNHDTACS 179

Query: 66  YHPGPAVFHDRMRGWKCCDIHV 1
           YHPGPAVFHDRMRGWKCCDIHV
Sbjct: 180 YHPGPAVFHDRMRGWKCCDIHV 201



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -3

Query: 570 CQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKH 391
           C+  GC   F + DN D +C YH    +FHD  + W CC     +F  F+++P C  G H
Sbjct: 159 CKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWH 218

Query: 390 TIE 382
             +
Sbjct: 219 NAD 221


>ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|ACI31548.1| RAR1 protein
           [Glycine max] gi|288310308|gb|ADC45393.1| RAR1-1
           [Glycine max]
          Length = 224

 Score =  278 bits (710), Expect = 1e-72
 Identities = 133/202 (65%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 MEK-GTRFRCQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLA 418
           MEK   + RCQRIGCDAMF++DDNPD  C+YHD+GPIFHDGTKEWSCCK+RSHDFSLFL 
Sbjct: 1   MEKTAVKVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLE 60

Query: 417 LPGCKTGKHTIEKPVMTKPVTRK--PSASVSPVNGASSKLDCSRCRQGFFCSEHGSQIKD 244
           +PGCKTGKHT  K V+T PV +   PS +      ASSK  C RC+QGFFCS+HGSQ K 
Sbjct: 61  IPGCKTGKHTTVKQVIT-PVKKNTMPSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKP 119

Query: 243 VN-SKPLHASPXXXXXXXXXXXNSTASVKKIVDLNVPQMCKNKGCGKTFKEKDNHDTACS 67
            N      A+                  KKIVD+N PQ+CKNKGCG+TFKEKDNHDTACS
Sbjct: 120 ANIIGDKAANLAGDASVDNNSSVHAPKPKKIVDINEPQVCKNKGCGQTFKEKDNHDTACS 179

Query: 66  YHPGPAVFHDRMRGWKCCDIHV 1
           YHPGPAVFHDRMRGWKCCDIHV
Sbjct: 180 YHPGPAVFHDRMRGWKCCDIHV 201



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -3

Query: 570 CQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKH 391
           C+  GC   F + DN D +C YH    +FHD  + W CC     +F  F+++P C  G H
Sbjct: 159 CKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWH 218

Query: 390 TIE 382
             +
Sbjct: 219 NAD 221


>ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycine max]
           gi|255640086|gb|ACU20334.1| unknown [Glycine max]
           gi|288310306|gb|ADC45392.1| RAR1-2 [Glycine max]
          Length = 224

 Score =  276 bits (707), Expect = 2e-72
 Identities = 134/202 (66%), Positives = 150/202 (74%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 MEK-GTRFRCQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLA 418
           MEK   + RCQRIGCDAMF++ DNPD SC+YHD+GPIFHDGTKEWSCCK+RSHDFSLFL 
Sbjct: 1   MEKTAVKVRCQRIGCDAMFSEADNPDGSCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLE 60

Query: 417 LPGCKTGKHTIEKPVMTKPVTRK--PSASVSPVNGASSKLDCSRCRQGFFCSEHGSQIKD 244
           +PGCKTGKHT  K V+T PV +   PS +      ASSK  C RCRQGFFCS HGSQ K 
Sbjct: 61  IPGCKTGKHTTVKQVIT-PVKKNTMPSPTAVSSTNASSKESCPRCRQGFFCSNHGSQSKP 119

Query: 243 VNSKPLHASPXXXXXXXXXXXNSTA-SVKKIVDLNVPQMCKNKGCGKTFKEKDNHDTACS 67
           VN     A+            +  A   KKIVD+N  Q+CKNKGCG+TFKEKDNHDTAC+
Sbjct: 120 VNVVGDKAANLAGDVSADNNSSVEAPKPKKIVDINEAQVCKNKGCGQTFKEKDNHDTACN 179

Query: 66  YHPGPAVFHDRMRGWKCCDIHV 1
           YHPGPAVFHDRMRGWKCCDIHV
Sbjct: 180 YHPGPAVFHDRMRGWKCCDIHV 201



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -3

Query: 570 CQRIGCDAMFTDDDNPDDSCKYHDAGPIFHDGTKEWSCCKQRSHDFSLFLALPGCKTGKH 391
           C+  GC   F + DN D +C YH    +FHD  + W CC     +F  F+++P C  G H
Sbjct: 159 CKNKGCGQTFKEKDNHDTACNYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWH 218

Query: 390 TIE 382
             +
Sbjct: 219 NAD 221