BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006949
         (3180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   369   3e-99
ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   369   4e-99
gb|EEC82400.1| hypothetical protein OsI_26768 [Oryza sativa Indi...   357   9e-96
ref|XP_002460972.1| hypothetical protein SORBIDRAFT_02g038550 [S...   356   2e-95
ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Sela...   355   4e-95

>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
            gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
            putative [Ricinus communis]
          Length = 654

 Score =  369 bits (947), Expect = 3e-99
 Identities = 193/362 (53%), Positives = 246/362 (67%), Gaps = 5/362 (1%)
 Frame = -3

Query: 3049 KVGLVHDELMYKHRPPKYNPNKPCHVENPGRLKAIWDRLNLEGIPQRCELVKAEAAKYED 2870
            +VGL++DE M KH    + P+   H ENP R+ AIW++L    IPQRC ++ A+ A+ ++
Sbjct: 14   RVGLLYDERMRKH----HTPDDDNHPENPNRISAIWNKLLANSIPQRCVVLNAKEAEDKN 69

Query: 2869 LIRVHSESHIELFEKVRSGDDLSKAE--ADKFDA-YLNNYSSQSALLACGSFTKVSMKVA 2699
            L+ VHS++H+ L   + S    S+ +  A KF++ Y N  SS++A LA GS  +V+ +VA
Sbjct: 70   LLAVHSKNHVNLIRNISSKQYESQRDNIASKFNSIYFNQGSSEAAYLAAGSVVEVAERVA 129

Query: 2698 KGELQSAVALVRPPGHHAEPNAAKGFCIFNNVAVAASSLLHNC--LQIKKILIIDWDVHH 2525
            KGEL SA A+VRPPGHHAE + A GFC+FNNVAVAAS LL     L IKKILI+DWDVHH
Sbjct: 130  KGELDSAAAIVRPPGHHAEHDKAMGFCLFNNVAVAASFLLDENPELGIKKILIVDWDVHH 189

Query: 2524 GNGTQDMFWKDPKVLFFSVHRYEPNFFYPQSELANYDKIGENLGVGYNINVPLTKESGND 2345
            GNGTQ  FWKDP+VLFFSVHR+E   FYP ++   Y  IGE  G GYNINVP       D
Sbjct: 190  GNGTQKTFWKDPRVLFFSVHRHEFGSFYPANDDGFYTMIGEGPGAGYNINVPWENGRCGD 249

Query: 2344 ADYLAIWDEILVPVVKTFEPDMILISGGFDAAEGDPLGEFKLTPRGFATMLKKLMEFAGG 2165
            ADYLA+WD IL+PV K F PDMI+IS GFDAA GDPLG  ++TP G++ MLKKLM+FA G
Sbjct: 250  ADYLAVWDHILIPVAKEFNPDMIIISAGFDAAVGDPLGGCRITPYGYSVMLKKLMDFANG 309

Query: 2164 KIAMTLEGGYNPTSLSNSVLLCVKTLLGDEIDCDVRDALVSKETKNVIRLVRKKLREVWK 1985
            KI + LEGGYN  S++NS   C++ LL  +      +A   + T  VI+ VRKKL   W 
Sbjct: 310  KIVLALEGGYNLESIANSFFACMEVLLESKPIAGSSEAYPFESTWRVIQAVRKKLSGYWA 369

Query: 1984 IL 1979
             L
Sbjct: 370  TL 371


>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
            gi|297733877|emb|CBI15124.3| unnamed protein product
            [Vitis vinifera]
          Length = 646

 Score =  369 bits (946), Expect = 4e-99
 Identities = 190/360 (52%), Positives = 243/360 (67%), Gaps = 3/360 (0%)
 Frame = -3

Query: 3049 KVGLVHDELMYKHRPPKYNPNKPCHVENPGRLKAIWDRLNLEGIPQRCELVKAEAAKYED 2870
            +VGLV+D+ M +H     +P    H ENP R++AIW +L   GIPQRC +  A+ A+ + 
Sbjct: 13   RVGLVYDDRMCEHATADGDP----HPENPDRIRAIWKKLESAGIPQRCVVFNAKEAEDKH 68

Query: 2869 LIRVHSESHIELFEKVRSG--DDLSKAEADKFDA-YLNNYSSQSALLACGSFTKVSMKVA 2699
            ++ VHS +H+ L + + S   D      A KF++ Y+N  SS++A LA GS  +V+ +VA
Sbjct: 69   ILSVHSNNHVNLIKNISSKQFDSRRNRIASKFNSIYMNEGSSEAAYLAAGSVIEVAERVA 128

Query: 2698 KGELQSAVALVRPPGHHAEPNAAKGFCIFNNVAVAASSLLHNCLQIKKILIIDWDVHHGN 2519
            KGEL SA A+VRPPGHHAE N   GFC++NNVA+A S LL+    IKKILI+DWDVHHGN
Sbjct: 129  KGELSSAFAIVRPPGHHAEQNEPMGFCLYNNVAIATSFLLNERPDIKKILIVDWDVHHGN 188

Query: 2518 GTQDMFWKDPKVLFFSVHRYEPNFFYPQSELANYDKIGENLGVGYNINVPLTKESGNDAD 2339
            GTQ MFWKDP+VLFFSVHR+E   FYP ++   Y   GE  G GYNINVP       DAD
Sbjct: 189  GTQKMFWKDPRVLFFSVHRHEFGSFYPANDEGFYAMTGEGPGAGYNINVPWENGRCGDAD 248

Query: 2338 YLAIWDEILVPVVKTFEPDMILISGGFDAAEGDPLGEFKLTPRGFATMLKKLMEFAGGKI 2159
            YLA+WD IL+PV K F PD+++IS GFDAA GDPLG   +TP G++ MLKKLMEF+ GKI
Sbjct: 249  YLAVWDHILIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKI 308

Query: 2158 AMTLEGGYNPTSLSNSVLLCVKTLLGDEIDCDVRDALVSKETKNVIRLVRKKLREVWKIL 1979
             M LEGGYN  SL+NSVL CV+ LL D+      +A   + T  VI+ VR++L   W  L
Sbjct: 309  IMALEGGYNLVSLANSVLACVEVLLEDKPIAGSSEAYPFESTWRVIQAVRQELSAFWPTL 368


>gb|EEC82400.1| hypothetical protein OsI_26768 [Oryza sativa Indica Group]
          Length = 695

 Score =  357 bits (917), Expect = 9e-96
 Identities = 189/362 (52%), Positives = 244/362 (67%), Gaps = 5/362 (1%)
 Frame = -3

Query: 3049 KVGLVHDELMYKHRPPKYNPNKPCHVENPGRLKAIWDRLNLEGIPQRCELVKAEAAKYED 2870
            +VGL++DE M  H  P        H ENP RL+AIW +L+ +G+  RC ++KA+ A+ + 
Sbjct: 12   RVGLLYDERMCAHATPDGEE----HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKY 67

Query: 2869 LIRVHSESHIELFEKVRSGDDLSKAE--ADKFDA-YLNNYSSQSALLACGSFTKVSMKVA 2699
            +  VHS++HI+L   + S +  S+    A KF++ Y N  SS+SA LA GS  +V+ KVA
Sbjct: 68   IASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVA 127

Query: 2698 KGELQSAVALVRPPGHHAEPNAAKGFCIFNNVAVAASSLLHNC--LQIKKILIIDWDVHH 2525
             GEL SA+ALVRPPGHHAE N A GFC+FNNVA+AA  LL+    L IKKILI+DWDVHH
Sbjct: 128  AGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHH 187

Query: 2524 GNGTQDMFWKDPKVLFFSVHRYEPNFFYPQSELANYDKIGENLGVGYNINVPLTKESGND 2345
            GNGTQ MF+ DP+VLFFSVHR++   FYP    A+Y  IGE  G GYNINVP       D
Sbjct: 188  GNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGD 247

Query: 2344 ADYLAIWDEILVPVVKTFEPDMILISGGFDAAEGDPLGEFKLTPRGFATMLKKLMEFAGG 2165
            ADY+A WD +L+PV +TF PD++L+S GFDAA GDPLG   +TP G+A +L KL+ FA G
Sbjct: 248  ADYIAAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQG 307

Query: 2164 KIAMTLEGGYNPTSLSNSVLLCVKTLLGDEIDCDVRDALVSKETKNVIRLVRKKLREVWK 1985
            +I M LEGGYN  S++NSV  C K LLGD+   D  D    + +  VI+ VR +L+  W 
Sbjct: 308  RIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWP 367

Query: 1984 IL 1979
            IL
Sbjct: 368  IL 369


>ref|XP_002460972.1| hypothetical protein SORBIDRAFT_02g038550 [Sorghum bicolor]
            gi|241924349|gb|EER97493.1| hypothetical protein
            SORBIDRAFT_02g038550 [Sorghum bicolor]
          Length = 703

 Score =  356 bits (914), Expect = 2e-95
 Identities = 193/378 (51%), Positives = 251/378 (66%), Gaps = 12/378 (3%)
 Frame = -3

Query: 3049 KVGLVHDELMYKHRPPKYNPNKPCHVENPGRLKAIWDRLNLEGIPQRCELVKAEAAKYED 2870
            +VGL++D+ M  H  P        H ENP RL+AIW +LN EG+  RC  +KA+ A+ + 
Sbjct: 16   RVGLLYDDRMRAHATPDGEE----HPENPERLRAIWRKLNAEGVAPRCVALKAKEAEDKY 71

Query: 2869 LIRVHSESHIELFEKVRSG--DDLSKAEADKFDA-YLNNYSSQSALLACGSFTKVSMKVA 2699
            +  VHS+SHI+L +++ S   D      A KF++ Y N  SS+SA+LA GS  +V+ KVA
Sbjct: 72   IASVHSKSHIKLMKEISSKKYDATRNKIARKFNSIYFNKGSSESAVLAAGSVIEVAEKVA 131

Query: 2698 KGELQSAVALVRPPGHHAEPNAAKGFCIFNNVAVAASSLLHNC--LQIKKILIIDWDVHH 2525
             GEL SA+ALVRPPGHHAE + A GFC+FNNVAVAA+ LL+    L IKKILI+DWDVHH
Sbjct: 132  AGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHH 191

Query: 2524 GNGTQDMFWKDPKVLFFSVHRYEPNFFYPQSELANYDKIGENLGVGYNINVPLTKESGND 2345
            GNGTQ MF+ DP+VLFFSVHR++   FYP    A++  IGE  G GYNINVP       D
Sbjct: 192  GNGTQKMFYNDPRVLFFSVHRFDYGSFYPAEGDASHCFIGEEGGKGYNINVPWEHGKCGD 251

Query: 2344 ADYLAIWDEILVPVVKTFEPDMILISGGFDAAEGDPLGEFKLTPRGFATMLKKLMEFAGG 2165
            ADY+A WD +L+PV K F+PD+IL+S GFDAA GDPLG   +TP G+A +L KL+ FA G
Sbjct: 252  ADYIAAWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQG 311

Query: 2164 KIAMTLEGGYNPTSLSNSVLLCVKTLLGDEIDCDVRDALVSKETKNVIRLVRKKLREVWK 1985
            +I M LEGGYN  S++NSV  C K LLGD+   +  +    + T +VI+ VR +L+  W 
Sbjct: 312  RIVMALEGGYNLRSIANSVCACAKVLLGDKFTFNAPEMQPFESTWSVIQAVRNELKTCWP 371

Query: 1984 ILH-------EVRYIPSP 1952
            +L         +R  PSP
Sbjct: 372  VLSSKLPENVSLRIRPSP 389


>ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
            gi|300153124|gb|EFJ19764.1| hypothetical protein
            SELMODRAFT_110614 [Selaginella moellendorffii]
          Length = 630

 Score =  355 bits (911), Expect = 4e-95
 Identities = 185/374 (49%), Positives = 249/374 (66%), Gaps = 8/374 (2%)
 Frame = -3

Query: 3052 LKVGLVHDELMYKHRPPKYNPNKPCHVENPGRLKAIWDRLNLEGIPQRCELVKAEAAKYE 2873
            + VGLV+D  M  HR    +P    H E P R+ AIW RL   G+  RC  V A  A  E
Sbjct: 3    MAVGLVYDRRMCAHR----DPFNKLHPEQPARITAIWKRLEDAGVLDRCVRVDARPATAE 58

Query: 2872 DLIRVHSESHIELFEKVRS---GDDLSKAEADKFDA-YLNNYSSQSALLACGSFTKVSMK 2705
            +L  VH++ HIE    V S   G +   A A ++++ Y N+ SS+SALLA GS  ++S+K
Sbjct: 59   ELATVHTDRHIEKMSSVSSRAYGKEGRAALARRYNSIYFNDGSSESALLAAGSVVELSLK 118

Query: 2704 VAKGELQSAVALVRPPGHHAEPNAAKGFCIFNNVAVAASSLLHNCLQIK---KILIIDWD 2534
            VA+GEL SA A+VRPPGHHAE + A GFC+FNNVAVAA  L    + +    K+LI+DWD
Sbjct: 119  VARGELASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDWD 178

Query: 2533 VHHGNGTQDMFWKDPKVLFFSVHRYEPNFFYPQSELANYDKIGENLGVGYNINVPLTKES 2354
            VHHGNGTQ+MFW+DP VL+FSVHRY+  +FYP  +  N+DK+G   G G+NINVP  +  
Sbjct: 179  VHHGNGTQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRGG 238

Query: 2353 GNDADYLAIWDEILVPVVKTFEPDMILISGGFDAAEGDPLGEFKLTPRGFATMLKKLMEF 2174
             +DADY+A+W+ +L+PV + F PD++LISGGFD+A GDPLG  KLTP G++ M ++LM+ 
Sbjct: 239  YSDADYVAVWEHVLMPVAREFNPDIVLISGGFDSARGDPLGGCKLTPLGYSIMTQELMQL 298

Query: 2173 AGGKIAMTLEGGYNPTSLSNSVLLCVKTLLGDEIDCDVRDALVSKE-TKNVIRLVRKKLR 1997
            AGGKI + LEGGYN  S++ S L CV+ LLGD I  +  D   + E T  +I  VR++L 
Sbjct: 299  AGGKIVLALEGGYNLESIAESYLACVQVLLGD-IQSERHDIERAYESTWTIIDKVRQELC 357

Query: 1996 EVWKILHEVRYIPS 1955
            + W +L E   +P+
Sbjct: 358  QYWPVLREKIEMPA 371