BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006948
         (1902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281125.1| PREDICTED: 50S ribosomal protein L1-like [Vi...   434   e-119
gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]                    416   e-113
ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG3...   416   e-113
ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Br...   409   e-111
gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japo...   406   e-110

>ref|XP_002281125.1| PREDICTED: 50S ribosomal protein L1-like [Vitis vinifera]
          Length = 429

 Score =  434 bits (1117), Expect = e-119
 Identities = 255/471 (54%), Positives = 297/471 (63%), Gaps = 14/471 (2%)
 Frame = +3

Query: 93   MAALELFFSHARRHCTTLQSSYISFLLPRSSTYIQPSRDLGFCKSPSTTSGSPFLGFHRL 272
            MAALEL  SHARRHCT                               T + +  LGFHR 
Sbjct: 1    MAALELLLSHARRHCT-------------------------------TRARASLLGFHRS 29

Query: 273  FCSSDSKNEDLDKVPPPTP--------SIKPVSYSIKPKDPS-ETPDKXXXXXXXXXXXX 425
             CSS S + + D   P  P         I+ VSY++KPKD S  +P+             
Sbjct: 30   LCSSSSSSSNPDPPQPDEPLKRSTESVPIQSVSYAMKPKDQSPPSPENPQPQTPSPQLPL 89

Query: 426  XXXXXXXSITTDSEQPSNAEPQAWTREDIRYVKDVPSISPVSYPFHVAPLPEDKASAPXX 605
                       +S+  S      WTRED+RYVKD PSISPVSYP  VAPLPED+ +A   
Sbjct: 90   PRRPR----QPESDWGSAESRSMWTREDMRYVKDAPSISPVSYPTRVAPLPEDRVTA--- 142

Query: 606  XXXXXXXXXXXXXXXNVQLERERWRTQTDARI-RRTLRVEDEKVLPFPTLIKVEKK-KQK 779
                           + ++E+ER R + + RI RR  RVE+EK  PFP LIKVEKK +QK
Sbjct: 143  -----EAEEEVGKKESEEMEKERIRIEAENRIRRRVFRVEEEKAFPFPRLIKVEKKQEQK 197

Query: 780  VVLDLQEAIREVKANARGKFDETIEAHVILGVDPRRGDQMVRGATTLPHGTGKTTRIAVF 959
            V+LDL +AIREVKANA   FDETIEAHV LG+D RR D  VRGA TLPHG+GK  R+AVF
Sbjct: 198  VILDLMDAIREVKANANRNFDETIEAHVRLGIDRRRSDMTVRGAATLPHGSGKVVRVAVF 257

Query: 960  XXXXXXXXXXXXXXDIVGGDELIEEIK---KGGAKLNFDKCIATPIFMPRLGKIARILGP 1130
                          DIVGGD+LI+EIK   +GG KLNFD+CIATP  MPRL KI+RIL  
Sbjct: 258  AEGTAAEEARAAGADIVGGDDLIDEIKNLHQGGGKLNFDRCIATPQMMPRLTKISRIL-- 315

Query: 1131 RGLMPNPKLGSVTSDVTAAVREAKRGRIDFKIDKTAIVHVGLGKVSFTEESLRENVGAFV 1310
            R LMPN   GSVT D+  AV EAKRGR++FK+DKTAIVHVGLGKVSF+E+ LREN+GAFV
Sbjct: 316  RSLMPNANRGSVTVDIAKAVGEAKRGRVEFKMDKTAIVHVGLGKVSFSEKVLRENIGAFV 375

Query: 1311 NALLLAKPVGLKKTSKYAGYVNSFALSSTMGPGFPVSIQSLSIAADHYSKL 1463
            NALLLAKP GLKKTSKYAGYVN+F L STMGPGFPVSIQSLS+AADHY+KL
Sbjct: 376  NALLLAKPAGLKKTSKYAGYVNAFHLCSTMGPGFPVSIQSLSMAADHYNKL 426


>gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]
          Length = 409

 Score =  416 bits (1069), Expect = e-113
 Identities = 232/410 (56%), Positives = 275/410 (67%), Gaps = 8/410 (1%)
 Frame = +3

Query: 264  HRLFC----SSDSKNEDLDKVPPPTPSIKPVSYSIKPKDPSETPDKXXXXXXXXXXXXXX 431
            HRL      SSD+K+       PP P IKPVSY+ KP+  +   +               
Sbjct: 18   HRLLSLFHFSSDAKSSSAS---PPPPPIKPVSYAPKPQQQAPPEESAAPTTPDVAPRDQS 74

Query: 432  XXXXXSITTDSEQPSNAEPQAWTREDIRYVKDV-PSISPVSYPFHVAPLPEDKASAPXXX 608
                  +    +QP    P+ WTR+D+RYVKD  P+ISPVSYP  VAPLPED+       
Sbjct: 75   P-----LPRRPQQPM--PPREWTRQDMRYVKDAAPAISPVSYPSRVAPLPEDRPVG---- 123

Query: 609  XXXXXXXXXXXXXXNVQLERERWRTQTDARIRRTLRVEDEKVLPFPTLIKVEKKKQKVVL 788
                           +Q E ER +       R    + +E  LP+PT+I V K+ QKV +
Sbjct: 124  -----GEVEEVQDGGLQGESERIQMNAARPTRSVFGMHEEDRLPYPTVIPVVKRPQKVAI 178

Query: 789  DLQEAIREVKANARGK---FDETIEAHVILGVDPRRGDQMVRGATTLPHGTGKTTRIAVF 959
            DL +AIR VK +A  K   F ET+EAHVILGVDPRRGDQMVRGA TLPHGTGKT R+AVF
Sbjct: 179  DLIDAIRLVKTSANEKKRNFVETVEAHVILGVDPRRGDQMVRGALTLPHGTGKTVRVAVF 238

Query: 960  XXXXXXXXXXXXXXDIVGGDELIEEIKKGGAKLNFDKCIATPIFMPRLGKIARILGPRGL 1139
                          D+VGGDELIEEI+ GG KL+FDKCIATP+FMPRL K+ARILGPRGL
Sbjct: 239  AEGPGADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMFMPRLSKVARILGPRGL 298

Query: 1140 MPNPKLGSVTSDVTAAVREAKRGRIDFKIDKTAIVHVGLGKVSFTEESLRENVGAFVNAL 1319
            MPNPKLGSVT+DV+ AV+ AK GR+DFKIDKTAIVHVGLGKV+FTEESLREN+GAFV+AL
Sbjct: 299  MPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFTEESLRENIGAFVHAL 358

Query: 1320 LLAKPVGLKKTSKYAGYVNSFALSSTMGPGFPVSIQSLSIAADHYSKLKL 1469
            LLAKPVGLKKTSKY GYV  F LSSTMGPG PV+I SLS+AADHY+K+++
Sbjct: 359  LLAKPVGLKKTSKYVGYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408


>ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG34349.1| 50S ribosomal
            protein L1 [Zea mays]
          Length = 409

 Score =  416 bits (1068), Expect = e-113
 Identities = 232/410 (56%), Positives = 275/410 (67%), Gaps = 8/410 (1%)
 Frame = +3

Query: 264  HRLFC----SSDSKNEDLDKVPPPTPSIKPVSYSIKPKDPSETPDKXXXXXXXXXXXXXX 431
            HRL      SSD+K+       PP P IKPVSY+ KP+  +   +               
Sbjct: 18   HRLLSLFHFSSDAKSSSAS---PPPPPIKPVSYAPKPQQQAPPEESAAPTTPDVAPRDQS 74

Query: 432  XXXXXSITTDSEQPSNAEPQAWTREDIRYVKDV-PSISPVSYPFHVAPLPEDKASAPXXX 608
                  +    +QP    P+ WTR+D+RYVKD  P+ISPVSYP  VAPLPED+       
Sbjct: 75   P-----LPRRPQQPM--PPREWTRQDMRYVKDAAPAISPVSYPSRVAPLPEDRPVG---- 123

Query: 609  XXXXXXXXXXXXXXNVQLERERWRTQTDARIRRTLRVEDEKVLPFPTLIKVEKKKQKVVL 788
                           +Q E ER +       R    + +E  LP+PT+I V K+ QKV +
Sbjct: 124  -----GEVEEVQDGGLQGESERIQMNAVRPTRSVFGMHEEDRLPYPTVIPVVKRPQKVAI 178

Query: 789  DLQEAIREVKANARGK---FDETIEAHVILGVDPRRGDQMVRGATTLPHGTGKTTRIAVF 959
            DL +AIR VK +A  K   F ET+EAHVILGVDPRRGDQMVRGA TLPHGTGKT R+AVF
Sbjct: 179  DLIDAIRLVKTSANEKKRNFVETVEAHVILGVDPRRGDQMVRGALTLPHGTGKTVRVAVF 238

Query: 960  XXXXXXXXXXXXXXDIVGGDELIEEIKKGGAKLNFDKCIATPIFMPRLGKIARILGPRGL 1139
                          D+VGGDELIEEI+ GG KL+FDKCIATP+FMPRL K+ARILGPRGL
Sbjct: 239  AEGPGADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMFMPRLSKVARILGPRGL 298

Query: 1140 MPNPKLGSVTSDVTAAVREAKRGRIDFKIDKTAIVHVGLGKVSFTEESLRENVGAFVNAL 1319
            MPNPKLGSVT+DV+ AV+ AK GR+DFKIDKTAIVHVGLGKV+FTEESLREN+GAFV+AL
Sbjct: 299  MPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFTEESLRENIGAFVHAL 358

Query: 1320 LLAKPVGLKKTSKYAGYVNSFALSSTMGPGFPVSIQSLSIAADHYSKLKL 1469
            LLAKPVGLKKTSKY GYV  F LSSTMGPG PV+I SLS+AADHY+K+++
Sbjct: 359  LLAKPVGLKKTSKYVGYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408


>ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Brachypodium distachyon]
          Length = 405

 Score =  409 bits (1051), Expect = e-111
 Identities = 232/415 (55%), Positives = 282/415 (67%), Gaps = 13/415 (3%)
 Frame = +3

Query: 264  HRLFCSSDSKNEDLDKVPPPTPSIKPVSYSIKPKDPSETPDKXXXXXXXXXXXXXXXXXX 443
            HRL       ++     PPP   IKPVSY+ KP+ P E                      
Sbjct: 18   HRLLPLFRFFSDSSTSAPPP---IKPVSYAPKPQAPPEETSAAEAP-------------- 60

Query: 444  XSITTDSEQPSNAEPQA------WTREDIRYVKDV-PSISPVSYPFHVAPLPEDKASAPX 602
             S + DS+ P    PQ       +TR+++R+VKD  P+I+PVSYP  V PLP+D  +   
Sbjct: 61   -SASPDSQFPPPRRPQQQPPPPQFTRQEMRFVKDAGPAIAPVSYPSRVVPLPDDHPA--- 116

Query: 603  XXXXXXXXXXXXXXXXNVQLERERWRTQTDARIRRTL---RVEDEKVLPFPTLIKVEKKK 773
                             ++ E ER   +  AR RR++   +VE+E V P+PTLI V K+ 
Sbjct: 117  -----DEGAGEGAVEEGLRGEGERIEMEV-ARARRSIFGVQVEEETV-PYPTLIPVVKRP 169

Query: 774  QKVVLDLQEAIREVKANARGK---FDETIEAHVILGVDPRRGDQMVRGATTLPHGTGKTT 944
            QKV +DL +A+RE+K++A  K   F ET+EAHV+LGVDPRRGDQMVRGA TLPHGTGKT 
Sbjct: 170  QKVAIDLVDALREIKSSANEKKRNFTETVEAHVMLGVDPRRGDQMVRGAITLPHGTGKTV 229

Query: 945  RIAVFXXXXXXXXXXXXXXDIVGGDELIEEIKKGGAKLNFDKCIATPIFMPRLGKIARIL 1124
            R+AVF              D+VGGDELIEEI+KGG KL+FDKCIATP+FMPRL K+ARIL
Sbjct: 230  RVAVFAEGPAAEEAKAAGADVVGGDELIEEIRKGGGKLSFDKCIATPMFMPRLSKVARIL 289

Query: 1125 GPRGLMPNPKLGSVTSDVTAAVREAKRGRIDFKIDKTAIVHVGLGKVSFTEESLRENVGA 1304
            GPRGLMPNPKLGSVT+DV+ AV+ AK GR+DFKIDKTAIVHVGLGKV+F+EESLREN+GA
Sbjct: 290  GPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFSEESLRENIGA 349

Query: 1305 FVNALLLAKPVGLKKTSKYAGYVNSFALSSTMGPGFPVSIQSLSIAADHYSKLKL 1469
            FVNALLLAKPVGLKKTSKY GYV  F LSSTMGPGFPV+I SLS AADHY+K+++
Sbjct: 350  FVNALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFPVTIPSLSAAADHYNKVQV 404


>gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japonica Group]
          Length = 417

 Score =  406 bits (1043), Expect = e-110
 Identities = 233/429 (54%), Positives = 280/429 (65%), Gaps = 26/429 (6%)
 Frame = +3

Query: 264  HRL-----FCSSDSKNEDLDKVPPPTPSIKPVSYSIKPKD-PSETPDKXXXXXXXXXXXX 425
            HRL     F S+          PPP   IKPVSY+ KP+  P E P              
Sbjct: 19   HRLISLLRFSSNTGSGSGSGPTPPP---IKPVSYAPKPQPAPEEAPAAAEE--------- 66

Query: 426  XXXXXXXSITTDSEQPSNAEP------------QAWTREDIRYVKDV-PSISPVSYPFHV 566
                        S+ P +  P            Q WTRE++R+VKD  PSI+PVSYP  V
Sbjct: 67   ---------AAPSDDPGSRPPPPPRRSQGPPQRQQWTREEMRFVKDAGPSITPVSYPARV 117

Query: 567  APLPEDKASAPXXXXXXXXXXXXXXXXXNVQLERERWRTQTDA-RIRRT---LRVEDEKV 734
            APLPED+ +                      L  E  R + DA R RR+   ++ E+E+ 
Sbjct: 118  APLPEDRPAEEAPPEGPADEG----------LRGEGERIEMDATRARRSFFGMQAEEEQA 167

Query: 735  LPFPTLIKVEKKKQKVVLDLQEAIREVKANARGK---FDETIEAHVILGVDPRRGDQMVR 905
             P+PTLI VEK+ QKV +DL +AIRE+K +A  K   F ET+EAHV+LGVDPRRGDQMVR
Sbjct: 168  -PYPTLIPVEKRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGVDPRRGDQMVR 226

Query: 906  GATTLPHGTGKTTRIAVFXXXXXXXXXXXXXXDIVGGDELIEEIKKGGAKLNFDKCIATP 1085
            GA TLPHGTGKT R+AVF              D+VGGDELIEEI+ GG KL+FDKCIATP
Sbjct: 227  GALTLPHGTGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATP 286

Query: 1086 IFMPRLGKIARILGPRGLMPNPKLGSVTSDVTAAVREAKRGRIDFKIDKTAIVHVGLGKV 1265
            ++MPRL K+ARILGPRGLMPNPKLGSVT+DV+ AV+ AK GR+DFKIDKTAIVHVGLGK+
Sbjct: 287  MYMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKI 346

Query: 1266 SFTEESLRENVGAFVNALLLAKPVGLKKTSKYAGYVNSFALSSTMGPGFPVSIQSLSIAA 1445
            +F++E+LREN+GAFV+ALLLAKPVGLKKTSKY GYV  F LSSTMGPGFPV+I SLS AA
Sbjct: 347  NFSDENLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFPVTIPSLSAAA 406

Query: 1446 DHYSKLKLK 1472
            DHY+  K++
Sbjct: 407  DHYNNSKVQ 415