BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006942
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]       452   e-125
ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo...   449   e-124
ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|1...   440   e-121
ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteo...   439   e-121
ref|XP_003635075.1| PREDICTED: ATP-dependent Clp protease proteo...   437   e-120

>gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
          Length = 305

 Score =  452 bits (1162), Expect = e-125
 Identities = 235/307 (76%), Positives = 256/307 (83%), Gaps = 2/307 (0%)
 Frame = +1

Query: 37  MEVSTMSSPFTLDTRMLASTRSPPNRIXXXXXXXXXXXXXXXXXXXXTTNFTAPFVGGSV 216
           MEV+T +S F L TRMLA+   P  R                     +T+F  PF G S+
Sbjct: 1   MEVATTASSFALHTRMLATPTIPRAR---NTTRPHPTSSRSLPRASLSTSFLCPFAGNSL 57

Query: 217 SADFSGQRIRPASLNPSS--SSRGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYL 390
           S++FSG ++RP+SLNP+S   S  KRGVVTMVI F RGSAWEQPPPDLASYLYKNRIVYL
Sbjct: 58  SSEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYL 117

Query: 391 GMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 570
           GMSLVPSVTELILAEFLYLQYED  KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177

Query: 571 KPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIELARKEVT 750
           KPPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIMMKQPIARFQGQATDIELAR+EV 
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIARFQGQATDIELARREVR 237

Query: 751 NVKAELVNLYSRHIGKPPEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGSEDRGIVSD 930
           NVK ELV L+++H+GK  EQIE DIRRPKYFSPSEAVEYGIIDKVLYNER +EDRG+VSD
Sbjct: 238 NVKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERSTEDRGVVSD 297

Query: 931 LKRAQLI 951
           LK+AQLI
Sbjct: 298 LKKAQLI 304


>ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
           gi|449510487|ref|XP_004163680.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
          Length = 304

 Score =  449 bits (1155), Expect = e-124
 Identities = 231/307 (75%), Positives = 254/307 (82%), Gaps = 2/307 (0%)
 Frame = +1

Query: 37  MEVSTMSSPFTLDTRMLASTRSPPNRIXXXXXXXXXXXXXXXXXXXXTTNFTAPFVGGSV 216
           MEV+T +S F L  R+     S  N                      +TNF  PF GGSV
Sbjct: 1   MEVATTASSFALTKRISPLITSSHN---GKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSV 57

Query: 217 SADFSGQRIRPASLNPSSS--SRGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYL 390
           S +FSG ++RP+SLNP+ S  S+GKRGVVTMVIPF RGSAWEQPPPDLASYLYKNRIVYL
Sbjct: 58  SGEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYL 117

Query: 391 GMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 570
           GMSLVPSVTELILAEFLYLQYED  KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYV 177

Query: 571 KPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIELARKEVT 750
           KPPIFTLCVGNAWGEAALLLA+GA GNRSALPSSTIM+K+PIARFQGQATD+E+ARKEV 
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVR 237

Query: 751 NVKAELVNLYSRHIGKPPEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGSEDRGIVSD 930
           NVKAELV LY++HIGK  E+IE DIRRPKYFSPSEAVEYGIIDKVLYNER +EDRG+VSD
Sbjct: 238 NVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSD 297

Query: 931 LKRAQLI 951
           LK+AQLI
Sbjct: 298 LKKAQLI 304


>ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|118483146|gb|ABK93479.1|
           unknown [Populus trichocarpa]
           gi|222870265|gb|EEF07396.1| predicted protein [Populus
           trichocarpa]
          Length = 310

 Score =  440 bits (1131), Expect = e-121
 Identities = 217/260 (83%), Positives = 239/260 (91%), Gaps = 2/260 (0%)
 Frame = +1

Query: 178 TTNFTAPFVGGSVSADFSGQRIRPASLNPSS--SSRGKRGVVTMVIPFLRGSAWEQPPPD 351
           +T F +PF GGS++ DFSG +IRP  LNP+S  SS+GKR VVTMVIP+ RGSAWEQPPPD
Sbjct: 51  STCFLSPFAGGSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPD 110

Query: 352 LASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYE 531
           LASYL+KNRIVYLGMSLVPSVTELILAEFLYLQYED EKPIYLYINSTGTTKGGEKLGYE
Sbjct: 111 LASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYE 170

Query: 532 TEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQG 711
           TEAFAIYDVM YVKPPIFTLCVGNAWGEAALLLA+G++GNRSALPSSTIMMKQPI RFQG
Sbjct: 171 TEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQPIGRFQG 230

Query: 712 QATDIELARKEVTNVKAELVNLYSRHIGKPPEQIEEDIRRPKYFSPSEAVEYGIIDKVLY 891
           QATD+ELARKE+ NVK ELVNL ++HIGK PE+IE DI RPKYFSP+EAVEYGIIDKV+Y
Sbjct: 231 QATDVELARKEIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVEYGIIDKVIY 290

Query: 892 NERGSEDRGIVSDLKRAQLI 951
           NER +EDRG+VSDLK+AQLI
Sbjct: 291 NERTTEDRGVVSDLKKAQLI 310


>ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Glycine max]
          Length = 304

 Score =  439 bits (1129), Expect = e-121
 Identities = 227/308 (73%), Positives = 255/308 (82%), Gaps = 3/308 (0%)
 Frame = +1

Query: 37  MEVSTMSSPFTLDTRMLASTRSPPNRIXXXXXXXXXXXXXXXXXXXXTTNFTAPFVG-GS 213
           MEV+T +S F L+  MLA     P+                      +T+F AP+ G  S
Sbjct: 1   MEVATAASSFALNKPMLAL----PSSSRTVTPIRCMNTSTSPVRTSLSTSFVAPYAGICS 56

Query: 214 VSADFSGQRIRPASLNPSS--SSRGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVY 387
            S+ FSG ++RP+SLNP+S   S  KRGVVTMVIPF RGSAWEQPPPDLASYLYKNRIVY
Sbjct: 57  ASSPFSGHKLRPSSLNPASFLGSNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVY 116

Query: 388 LGMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRY 567
           LGMSLVPSVTELILAEFLYLQYED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRY
Sbjct: 117 LGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRY 176

Query: 568 VKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIELARKEV 747
           VKPPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIM++QPIARFQGQATD+ LAR+EV
Sbjct: 177 VKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARREV 236

Query: 748 TNVKAELVNLYSRHIGKPPEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGSEDRGIVS 927
            NVK ELV LY++H+ K PEQIE DI+RPKYFSPSEAVEYGIIDKV+YN+RG+EDRG+VS
Sbjct: 237 NNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGTEDRGVVS 296

Query: 928 DLKRAQLI 951
           DLK+A+LI
Sbjct: 297 DLKKARLI 304


>ref|XP_003635075.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Vitis vinifera]
          Length = 297

 Score =  437 bits (1123), Expect = e-120
 Identities = 231/307 (75%), Positives = 252/307 (82%), Gaps = 2/307 (0%)
 Frame = +1

Query: 37  MEVSTMSSPFTLDTRMLASTRSPPNRIXXXXXXXXXXXXXXXXXXXXTTNFTAPFVGGSV 216
           M V+TM+S     TRMLA    PP                         N  +P+VGGSV
Sbjct: 1   MGVATMASNLFTHTRMLA----PPTN------SGTTSSNRTLASFSLRANLLSPYVGGSV 50

Query: 217 SADFSGQRIRPASLNPSS--SSRGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYL 390
           ++DFSGQ+IRP+SL  +S   S  KRG VTMVIPF RGSA +QPPPDL SYL+KNRIVYL
Sbjct: 51  ASDFSGQKIRPSSLYSASFSGSHAKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYL 110

Query: 391 GMSLVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 570
           GMSLVPSVTELILAEFLYLQY+DAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YV
Sbjct: 111 GMSLVPSVTELILAEFLYLQYDDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 170

Query: 571 KPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIELARKEVT 750
           K PIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIM+KQPIARFQGQATDI+LARKEV 
Sbjct: 171 KSPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQPIARFQGQATDIDLARKEVK 230

Query: 751 NVKAELVNLYSRHIGKPPEQIEEDIRRPKYFSPSEAVEYGIIDKVLYNERGSEDRGIVSD 930
           NVKAELV LY++HIGK PE+IE DIRRPKYFSPSEAVEYGIIDKVLYNER SEDRG+V+D
Sbjct: 231 NVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSSEDRGVVAD 290

Query: 931 LKRAQLI 951
           LK+AQLI
Sbjct: 291 LKKAQLI 297