BLASTX nr result

ID: Cimicifuga21_contig00006928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006928
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269365.1| PREDICTED: uncharacterized protein LOC100259...    91   1e-16
ref|XP_002334932.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|AFK45291.1| unknown [Lotus japonicus]                               90   2e-16
ref|XP_002313879.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002300243.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_002269365.1| PREDICTED: uncharacterized protein LOC100259535 [Vitis vinifera]
          Length = 226

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -3

Query: 230 MAPLHLFI-SSLLFLTALQGLQAVEYTATNNAIGTPGGTRFTNEIGIEYSRQTLESASAF 54
           MA  H+F+ SSL+ L AL G+ AVEY  TNNA  + GG RF N+IGIEYSRQTL SA+ F
Sbjct: 1   MAYNHMFLLSSLVVLAALHGIHAVEYVVTNNAENSTGGVRFNNDIGIEYSRQTLVSATEF 60

Query: 53  IWQTFKQTSATDRKNVQ 3
           IW+ F+Q +  DRK+VQ
Sbjct: 61  IWRLFQQNTPADRKDVQ 77


>ref|XP_002334932.1| predicted protein [Populus trichocarpa] gi|222832393|gb|EEE70870.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = -3

Query: 218 HLFISSLLFLTALQGLQAVEYTATNNAIGTPGGTRFTNEIGIEYSRQTLESASAFIWQTF 39
           H+++ SLL   A+  + AV+YT TN A  T GG RFT +IG++YS+QTL SA+ FIW+TF
Sbjct: 4   HVYVLSLLVFLAINAVSAVDYTVTNRASATAGGARFTRDIGVDYSKQTLASATDFIWRTF 63

Query: 38  KQTSATDRKNVQ 3
           +Q++A DRKNVQ
Sbjct: 64  QQSNAADRKNVQ 75


>gb|AFK45291.1| unknown [Lotus japonicus]
          Length = 225

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/70 (58%), Positives = 55/70 (78%)
 Frame = -3

Query: 212 FISSLLFLTALQGLQAVEYTATNNAIGTPGGTRFTNEIGIEYSRQTLESASAFIWQTFKQ 33
           FI  L+FLTA+QG +AV+YT TN A+ TPGG RF ++IG   +RQTL+SA+ FIW+ F+Q
Sbjct: 5   FIGLLIFLTAMQGTKAVDYTVTNKALSTPGGVRFRDQIGEASARQTLDSATQFIWRIFQQ 64

Query: 32  TSATDRKNVQ 3
            +A DRKNV+
Sbjct: 65  NTAADRKNVE 74


>ref|XP_002313879.1| predicted protein [Populus trichocarpa] gi|222850287|gb|EEE87834.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/72 (54%), Positives = 55/72 (76%)
 Frame = -3

Query: 218 HLFISSLLFLTALQGLQAVEYTATNNAIGTPGGTRFTNEIGIEYSRQTLESASAFIWQTF 39
           H+++ SLL L A+  + AV+YT TN A  T GG RF  +IG++YS+QTL SA+ FIW+TF
Sbjct: 4   HVYVLSLLVLLAINTVSAVDYTVTNRATATAGGARFITDIGVDYSKQTLASATDFIWETF 63

Query: 38  KQTSATDRKNVQ 3
           +Q++A DRKN+Q
Sbjct: 64  QQSNAADRKNIQ 75


>ref|XP_002300243.1| predicted protein [Populus trichocarpa] gi|222847501|gb|EEE85048.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = -3

Query: 218 HLFISSLLFLTALQGLQAVEYTATNNAIGTPGGTRFTNEIGIEYSRQTLESASAFIWQTF 39
           H+++ SLL L A+  + AV+YT TN A  T GG RFT +IG++YS+QTL SA+ FIW+T 
Sbjct: 4   HVYVLSLLVLLAINTVSAVDYTVTNRASATAGGARFTRDIGVDYSKQTLASATDFIWRTL 63

Query: 38  KQTSATDRKNVQ 3
           +Q++A DRKNVQ
Sbjct: 64  QQSNAADRKNVQ 75


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