BLASTX nr result

ID: Cimicifuga21_contig00006916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006916
         (1784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236365.1| squalene synthase [Glycine max] gi|2463569|d...   665   0.0  
gb|ACU21003.1| unknown [Glycine max]                                  661   0.0  
ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]   660   0.0  
gb|ACN69082.1| squalene synthase [Diospyros kaki]                     654   0.0  
gb|AGB05603.1| squalene synthase [Camellia oleifera]                  653   0.0  

>ref|NP_001236365.1| squalene synthase [Glycine max] gi|2463569|dbj|BAA22559.1| squalene
            synthase [Glycine max]
          Length = 413

 Score =  665 bits (1716), Expect = 0.0
 Identities = 324/389 (83%), Positives = 352/389 (90%)
 Frame = +2

Query: 248  MATLKAIVNHPDELLPLLKLKMASKNAEKQIPPEPHWAFCYSMLHKVSRSFAFVIAQLDV 427
            M +L AI+ HPD+  PLLKLKMA++NAEKQIPPEPHWAFCY+MLHKVSRSFA VI QL +
Sbjct: 1    MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGI 60

Query: 428  ELRNAVCIFYLVLRALDTVEDDTSISSDVKVPILEAFHRHIYDLNWHFSCGTKEYKVLMD 607
            ELRNAVCIFYLVLRALDTVEDDTSI +DVKVPIL AFHRHIYD +WHFSCGTKEYKVLMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 608  QLHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 787
            Q HHV TAFLELGK YQEAIE+ITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 788  SKLFYASRLEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 967
            SKLF+AS  EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IWS+YVNKL
Sbjct: 181  SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL 240

Query: 968  EDLKYEVNSVKAVQCLNDMVTNALLHAEDCLKYMSALREPSIFRFCAIPQIMAIGTLALC 1147
            EDLKYE NSVKAVQCLNDMVTNAL+H EDCLKYM+ALR+P IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNALMHPEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC 300

Query: 1148 YNNVAVFRGVVKMRRGLTAKVMNGTGTMSDVYGAFFDFSSILKSKIDMNDPNAIKTLSRI 1327
            YNN+ VFRGVVKMRRGLTAKV++ T TM+DVYGAFFDF+S+L+ K+D NDPNA KTLSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL 360

Query: 1328 EAIQKTCTESGQLKPRRSRIVNDHPSYNS 1414
            EAIQKTC ESG L  R+S IVND   Y S
Sbjct: 361  EAIQKTCRESGLLSKRKSYIVNDESGYGS 389


>gb|ACU21003.1| unknown [Glycine max]
          Length = 413

 Score =  661 bits (1706), Expect = 0.0
 Identities = 324/389 (83%), Positives = 351/389 (90%)
 Frame = +2

Query: 248  MATLKAIVNHPDELLPLLKLKMASKNAEKQIPPEPHWAFCYSMLHKVSRSFAFVIAQLDV 427
            M +L AI+ HPD+  PLLKLKMA++NAEKQIPPEPHWAF Y+MLHKVSRSFA VI QL  
Sbjct: 1    MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFRYTMLHKVSRSFALVIQQLGT 60

Query: 428  ELRNAVCIFYLVLRALDTVEDDTSISSDVKVPILEAFHRHIYDLNWHFSCGTKEYKVLMD 607
            ELRNAVCIFYLVLRALDTVEDDTSI +DVKVPIL AFHRHIYD +WHFSCGTKEYKVLMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 608  QLHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 787
            Q HHV TAFLELGK YQEAIE+ITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 788  SKLFYASRLEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 967
            SKLF+AS  EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IWS+YVNKL
Sbjct: 181  SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL 240

Query: 968  EDLKYEVNSVKAVQCLNDMVTNALLHAEDCLKYMSALREPSIFRFCAIPQIMAIGTLALC 1147
            EDLKYE NSVKAVQCLNDMVTNAL+HAEDCLKYM+ALR+P IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC 300

Query: 1148 YNNVAVFRGVVKMRRGLTAKVMNGTGTMSDVYGAFFDFSSILKSKIDMNDPNAIKTLSRI 1327
            YNN+ VFRGVVKMRRGLTAKV++ T TM+DVYGAFFDF+S+L+ K+D NDPNA KTLSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL 360

Query: 1328 EAIQKTCTESGQLKPRRSRIVNDHPSYNS 1414
            EAIQKTC ESG L  R+S IVND   Y S
Sbjct: 361  EAIQKTCRESGLLSKRKSYIVNDESGYGS 389


>ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]
          Length = 413

 Score =  660 bits (1703), Expect = 0.0
 Identities = 323/389 (83%), Positives = 350/389 (89%)
 Frame = +2

Query: 248  MATLKAIVNHPDELLPLLKLKMASKNAEKQIPPEPHWAFCYSMLHKVSRSFAFVIAQLDV 427
            M +L AI+ +PD+  PLLKLKMA++NAEKQIPPEPHWAFCY+MLHKVSRSFA VI QL  
Sbjct: 1    MGSLGAILKNPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGT 60

Query: 428  ELRNAVCIFYLVLRALDTVEDDTSISSDVKVPILEAFHRHIYDLNWHFSCGTKEYKVLMD 607
            ELRNAVCIFYLVLRALDTVEDDTSI +DVKVPIL AFHRHIYD +WHFSCGTKEYKVLMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 608  QLHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 787
            Q HHV TAFLELGK YQEAIE+ITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 788  SKLFYASRLEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 967
            SKLF+AS  EDLA D LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IWSKYVNKL
Sbjct: 181  SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240

Query: 968  EDLKYEVNSVKAVQCLNDMVTNALLHAEDCLKYMSALREPSIFRFCAIPQIMAIGTLALC 1147
            EDLKYE NSVKAVQCLNDMVTNAL+HAEDCL YM+ALR+P IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNALMHAEDCLTYMAALRDPPIFRFCAIPQIMAIGTLALC 300

Query: 1148 YNNVAVFRGVVKMRRGLTAKVMNGTGTMSDVYGAFFDFSSILKSKIDMNDPNAIKTLSRI 1327
            YNN+ VFRGVVKMRRGLTAKV++ T TM+DVYGAFFDF+S+L+SK+D NDPNA K LSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTTTMADVYGAFFDFASMLESKVDKNDPNATKALSRL 360

Query: 1328 EAIQKTCTESGQLKPRRSRIVNDHPSYNS 1414
            EAIQKTC ESG L  R+S IV D   Y S
Sbjct: 361  EAIQKTCRESGLLSKRKSYIVKDESGYGS 389


>gb|ACN69082.1| squalene synthase [Diospyros kaki]
          Length = 415

 Score =  654 bits (1687), Expect = 0.0
 Identities = 316/389 (81%), Positives = 354/389 (91%)
 Frame = +2

Query: 248  MATLKAIVNHPDELLPLLKLKMASKNAEKQIPPEPHWAFCYSMLHKVSRSFAFVIAQLDV 427
            M +L A++ HPD++ PL+KLKMA+++AEKQIPPEPHWAFCY+MLHKVSRSF  VI QL  
Sbjct: 1    MGSLAAMLRHPDDVYPLVKLKMAARHAEKQIPPEPHWAFCYTMLHKVSRSFGLVIQQLGT 60

Query: 428  ELRNAVCIFYLVLRALDTVEDDTSISSDVKVPILEAFHRHIYDLNWHFSCGTKEYKVLMD 607
            ELRNAVCIFYLVLRALDTVEDDTSI+++VKVPIL AFH HIYD +WHFSCGT+EYKVLMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILLAFHHHIYDRDWHFSCGTREYKVLMD 120

Query: 608  QLHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 787
            + HHV TAFLELGKGYQEAIE+IT RMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  EFHHVSTAFLELGKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 788  SKLFYASRLEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 967
            SKLF+AS LEDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IWSKYVNKL
Sbjct: 181  SKLFHASGLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240

Query: 968  EDLKYEVNSVKAVQCLNDMVTNALLHAEDCLKYMSALREPSIFRFCAIPQIMAIGTLALC 1147
            EDLKYE NSVK+VQCLNDMVTNAL+H +DCLKYMSALR+P+IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEKNSVKSVQCLNDMVTNALIHVDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC 300

Query: 1148 YNNVAVFRGVVKMRRGLTAKVMNGTGTMSDVYGAFFDFSSILKSKIDMNDPNAIKTLSRI 1327
            YNN+ VFRGVVKMRRGLTAKV++ T T+SDVYGAFFDFS +LKSK++ NDPN+ KTLSRI
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDQTKTISDVYGAFFDFSCMLKSKVEKNDPNSTKTLSRI 360

Query: 1328 EAIQKTCTESGQLKPRRSRIVNDHPSYNS 1414
            EAIQKTC ESG L  R+S I+    ++NS
Sbjct: 361  EAIQKTCRESGTLSKRKSYILRSKRTHNS 389


>gb|AGB05603.1| squalene synthase [Camellia oleifera]
          Length = 414

 Score =  653 bits (1684), Expect = 0.0
 Identities = 318/389 (81%), Positives = 349/389 (89%)
 Frame = +2

Query: 248  MATLKAIVNHPDELLPLLKLKMASKNAEKQIPPEPHWAFCYSMLHKVSRSFAFVIAQLDV 427
            M +L AI+ HPD+  PL+KLKMA++ AEK IPPEPHW FCYSMLHKVSRSFA VI QLD 
Sbjct: 1    MGSLGAILKHPDDFYPLMKLKMAARRAEKNIPPEPHWGFCYSMLHKVSRSFALVIQQLDT 60

Query: 428  ELRNAVCIFYLVLRALDTVEDDTSISSDVKVPILEAFHRHIYDLNWHFSCGTKEYKVLMD 607
            ELRNAVCIFYLVLRALDTVEDDTSI+++VKVPIL AFHRHIYD +WHFSCGTKEYKVLMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILMAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 608  QLHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 787
            + HHV TAF ELG+GYQEAIE+IT RMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  EFHHVSTAFSELGRGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 788  SKLFYASRLEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL 967
            SKLF+AS  EDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IWSKYVNKL
Sbjct: 181  SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240

Query: 968  EDLKYEVNSVKAVQCLNDMVTNALLHAEDCLKYMSALREPSIFRFCAIPQIMAIGTLALC 1147
            EDLK + NSVKAV+CLNDMVTNAL+H EDCL YMSALR+PSIFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKDKENSVKAVECLNDMVTNALIHVEDCLTYMSALRDPSIFRFCAIPQIMAIGTLALC 300

Query: 1148 YNNVAVFRGVVKMRRGLTAKVMNGTGTMSDVYGAFFDFSSILKSKIDMNDPNAIKTLSRI 1327
            YNN+ VFRGVVKMRRGLTAKV++ T TMSDVYGAFFDFS +LKSK++ +DPNA+K LSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCMLKSKVNKSDPNAMKALSRL 360

Query: 1328 EAIQKTCTESGQLKPRRSRIVNDHPSYNS 1414
            EAIQK C ESG L  R+S IV   P YNS
Sbjct: 361  EAIQKICRESGTLNKRKSYIVKSEPRYNS 389


Top