BLASTX nr result

ID: Cimicifuga21_contig00006856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006856
         (2120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245...   320   7e-85
ref|XP_002515338.1| ring finger protein, putative [Ricinus commu...   291   4e-76
ref|XP_002332113.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-69
ref|XP_004138766.1| PREDICTED: uncharacterized protein LOC101206...   269   3e-69
ref|XP_004160841.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   268   3e-69

>ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245643 [Vitis vinifera]
          Length = 550

 Score =  320 bits (821), Expect = 7e-85
 Identities = 233/563 (41%), Positives = 297/563 (52%), Gaps = 18/563 (3%)
 Frame = -1

Query: 1901 RDASSHDDRSVH-CNRLVCSNRHNYIKSPQVGNSDRDKTS--SSFRAS-GKAIVGSSSKP 1734
            RD +++ DR+   CNRL C  R N +K  Q+G+ ++ K+S  SSF +S GK I+GSSS  
Sbjct: 29   RDTANNRDRNAQFCNRLGCRGRLNSMKGTQLGSLEKPKSSRPSSFTSSSGKEIIGSSSST 88

Query: 1733 YSSV-----TNYRKASLESSDPSSLEGTLSTETNSMHLGKVNTEPSSSTGRAQAKVPAAK 1569
              SV     T  +K S      SS   ++  E+  + L                K+    
Sbjct: 89   GPSVRKSLQTPRKKLSAHLETDSSETSSVPDESEVLELIP-----------PPGKIQRGH 137

Query: 1568 YAESGVQEGSIXXXXXXXXXXXXXXTRTQKQFNRQSGQGNQETLVGSSSRRFFGPKNTGQ 1389
            + ++   E S               TR ++ F+++SG  NQ TL+GSS       K  GQ
Sbjct: 138  HPKADDTESSEITPMEVGSSSIASNTRPRRNFHQKSGFTNQATLMGSSVA--LASKTAGQ 195

Query: 1388 AAKTASHWQSFNASRSSSSMPHTNRYGLRNLGCTSISDVLXXXXXXXXXXXXGRAEMAKR 1209
             A+  +     NASR          YGLRNL C SISD +             + ++ K+
Sbjct: 196  VARHGA-----NASR----------YGLRNLRCNSISDAMPSCSSSESNLTRKK-DIGKK 239

Query: 1208 RTPDGEYXXXXXXXXXXXXXXXXXXXXXXSLAGRSLSLSERPSQPTSRRTKYWLQSR-NG 1032
            R  + E                          GR+   S   S   SRR++ W  SR NG
Sbjct: 240  RLSEIESSSSARGKKSGGPSSEY---------GRNSISSYGVSISDSRRSRNWTPSRDNG 290

Query: 1031 VTSVRTRRTINEDSRSRVSETD----NTTSQFEPSVVIPQLLQSDASVIEPGPSLSQQSV 864
            V SVRTRR+IN ++ SR S ++    N     EPS+ IPQ+ Q + S+    PSLS Q  
Sbjct: 291  VASVRTRRSINGNT-SRPSSSNQGIRNNLLPTEPSITIPQMPQPEISIGANDPSLSHQFS 349

Query: 863  EELPAMGQNSYVQLGGRDENVCS-SPLGHPQDGARQFNGLLIXXXXXXXXXXXGIAEVLL 687
               P+   NSY Q     EN+ S  P+   + G  + +   +           GIAEVLL
Sbjct: 350  IGSPSSFLNSYSQSDSSSENLHSIMPISPTEVGISRSS---MNRDSLRRYNMDGIAEVLL 406

Query: 686  ALERIEQDEELTYEQLLILETNLFLSGLGFRDHHRDMRLDIDNMSYEELLALGEKIGTVS 507
            ALERIEQDEELTYEQLL+LETNLFL GL F D HR+MRLDIDNMSYEELLAL EK+GTVS
Sbjct: 407  ALERIEQDEELTYEQLLVLETNLFLGGLSFHDQHREMRLDIDNMSYEELLALEEKMGTVS 466

Query: 506  TGLTEEQLSNCLKRSFY--MPASP-NLKIGYVGDDVKCSICQEEYADGDEMATLGCDHHY 336
            T LTEE LS CL+RS Y  +P  P  +     GDDVKCSICQEEY  GDE+  L C+H Y
Sbjct: 467  TALTEEALSKCLERSIYHTLPTEPGTMDCAGDGDDVKCSICQEEYMVGDEVGKLQCEHGY 526

Query: 335  HLVCIHQWLRLKNWCPICKAPAA 267
            H+ CIHQWLRLKNWCP+CKA AA
Sbjct: 527  HVACIHQWLRLKNWCPVCKASAA 549


>ref|XP_002515338.1| ring finger protein, putative [Ricinus communis]
            gi|223545282|gb|EEF46787.1| ring finger protein, putative
            [Ricinus communis]
          Length = 554

 Score =  291 bits (746), Expect = 4e-76
 Identities = 223/581 (38%), Positives = 285/581 (49%), Gaps = 10/581 (1%)
 Frame = -1

Query: 1973 MEGYSGKXXXXXXXXXXXXXXXXFRDASSHDDRSVH-CNRLVCSNRHNYIKSPQVGNSDR 1797
            M+ YSGK                 RD +++ DR+   CNR+ CS R N  K  Q+  S++
Sbjct: 1    MDEYSGKKAGDGLAVSRKGSSIILRDTANNRDRNAQFCNRIGCSGRLNSAKGTQISCSEK 60

Query: 1796 DKTSS-SFRAS--GKAIVGSSSKPYSSVTNYRKASLESSDP-SSLEGTLSTETNSMHLGK 1629
             K+S  SFR+S  GK I+GSSS+ YS   N RK+        SS     S+ET       
Sbjct: 61   AKSSRPSFRSSTNGKEIIGSSSRTYSPTNNSRKSLPGPRKKLSSQPERDSSETGGSPDDN 120

Query: 1628 VNTEPSSSTGRAQAKVPAAKYAESGVQEGSIXXXXXXXXXXXXXXTRTQKQFNRQSGQGN 1449
               E  S  G+ Q  +    ++ES    GS               TR++K  +R++G G 
Sbjct: 121  EVPELVSPPGKIQKGL----HSESD-DSGSSENTSMEVGTSSISNTRSRKGIHRKAGFGK 175

Query: 1448 QETLVGSSSRRFFGPKNTGQAAKTASHWQSFNASRSSSSMPHTNRYGLRNLGCTSISDVL 1269
             +T +GS        KNT QAA+  +                  RYGL NL C+SISD +
Sbjct: 176  PDTSIGSPVSLL--SKNTSQAARAGA-----------------GRYGLGNLRCSSISDAV 216

Query: 1268 XXXXXXXXXXXXGRAEMAKRRTPDGEYXXXXXXXXXXXXXXXXXXXXXXSLAGRSLSLSE 1089
                         + +  ++R  +GE                       SL GR++S S 
Sbjct: 217  STGSSTSDSKLTRQKDTIRKRICEGE----------SSSSARGKKISGSSLEGRNISSSS 266

Query: 1088 RPSQPTSRRTKYWLQSR-NGVTSVRTRRTINED-SRSRVSETDNTTSQFEPSVVIPQLLQ 915
              S   SRRT+    SR NG  SVRT R+     SR+      N     EP V IPQ+ Q
Sbjct: 267  GISISDSRRTRNGTSSRDNGPASVRTPRSFGYTRSRAANQGRGNNLPPNEPHV-IPQMSQ 325

Query: 914  SDASVIEPGPSLSQQSVEELPAMGQNSYVQLGGRDENVCSSPLGHPQDGARQFNGLLIXX 735
                +    PS S Q     P     +Y      +E++       P +     +   +  
Sbjct: 326  PIMPINSNSPSSSHQFSLGSPLSRSRAYGLPSSTNESLRGIRPSSPAEVGNIRSA--VNR 383

Query: 734  XXXXXXXXXGIAEVLLALERIEQDEELTYEQLLILETNLFLSGLGFRDHHRDMRLDIDNM 555
                     GIAEVLLALERIE DEEL+YEQLL+LET++FL+GL F D HRDMRLDIDNM
Sbjct: 384  ESFRRYNMDGIAEVLLALERIEHDEELSYEQLLVLETSMFLNGLNFYDQHRDMRLDIDNM 443

Query: 554  SYEELLALGEKIGTVSTGLTEEQLSNCLKRSFYMPAS---PNLKIGYVGDDVKCSICQEE 384
            SYEELLAL E++G VST LTEE LS CLK S +  AS    +  +    DDVKCSICQEE
Sbjct: 444  SYEELLALEERMGNVSTALTEEALSECLKTSIFQSASLEDASSDLCGEKDDVKCSICQEE 503

Query: 383  YADGDEMATLGCDHHYHLVCIHQWLRLKNWCPICKAPAAES 261
            Y  GDEM  L C+H YH+ C+ QWLRLKNWCPICKA AA S
Sbjct: 504  YTVGDEMGRLQCEHRYHVACVQQWLRLKNWCPICKASAAPS 544


>ref|XP_002332113.1| predicted protein [Populus trichocarpa] gi|222874933|gb|EEF12064.1|
            predicted protein [Populus trichocarpa]
          Length = 543

 Score =  270 bits (690), Expect = 1e-69
 Identities = 213/593 (35%), Positives = 282/593 (47%), Gaps = 22/593 (3%)
 Frame = -1

Query: 1973 MEGYSGKXXXXXXXXXXXXXXXXFRD-ASSHDDRSVHCNRLVCSNRHNYIKSPQVGN--- 1806
            M+ YSGK                 RD A++ D ++  CNR+ CS R N  K  Q+ +   
Sbjct: 1    MDDYSGKRAGDRFIVSRKGSPHVLRDTANNRDQKAQFCNRIGCSGRLNSSKGTQISSEKA 60

Query: 1805 -SDRDKTSSSFRASGKAIVGSSS--------KPYSSVTNYRKASLESSDPSSLEGTLSTE 1653
             S R +   S  +SGK   GSSS        KP +S+   RK      +  SLE     +
Sbjct: 61   KSSRPRPLISSSSSGKEKNGSSSNKAFSAISKPRNSLQEPRKKFSSQLESESLETGSGQD 120

Query: 1652 TNSMHLGKVNTEPSSST-GRAQAKVPAAKYAESGVQEGSIXXXXXXXXXXXXXXTRTQKQ 1476
              +   G++  +    T G A + + + +   SG+ + +                R+   
Sbjct: 121  EVTPPSGRIKLDLRPETDGAASSDITSMEAGSSGISKST----------------RSHWN 164

Query: 1475 FNRQSGQGNQETLVGSSSRRFFGPKNTGQAAKTASHWQSFNASRSSSSMPHTNRYGLRNL 1296
            F+++SG  N ET+VGS             A+K+       NASR          +G RNL
Sbjct: 165  FHQKSGLVNPETVVGSP---------VSLASKSTIQGTRLNASR----------FGHRNL 205

Query: 1295 GCTSISDVLXXXXXXXXXXXXGRAEMAKRRTPDGEYXXXXXXXXXXXXXXXXXXXXXXSL 1116
             C ++SD               R +   +R  DGE                       SL
Sbjct: 206  RCNTVSDSSSSGSSSSDLNLSRRKDTFNKRICDGE----------SSSFARGKRMIGSSL 255

Query: 1115 AGRSLSLSERPSQPTSRRTKYWLQSRNG-VTSVRTRRTINEDSRSRVSE--TDNTTSQFE 945
             GRS S +   S   SRR +    +R+    S+ +RR ++  +R+RV+   + N  S  E
Sbjct: 256  EGRSSSSNSGISISDSRRARTGTLNRDSSAASIGSRRPLSGYTRARVANQGSGNNLSANE 315

Query: 944  PSVVIPQLLQSDASVIEPGPSLSQQSVEELPAMGQNSYVQLGGRDENVCSSPLGHPQDGA 765
                IP   Q D S+    PS S     E      +SY + G  + ++       P+   
Sbjct: 316  ----IPLTSQPDMSLDLNAPSSSHHFSVEASLGRPSSYSRPGSSNGSLRGIRPSSPEVSN 371

Query: 764  RQFNGLLIXXXXXXXXXXXGIAEVLLALERIEQDEELTYEQLLILETNLFLSGLGFRDHH 585
             Q    L+           GIAEVLLAL+RIEQDEELTYEQLL+LET+L L+GL F D H
Sbjct: 372  AQS---LMNRESFQRYNMVGIAEVLLALQRIEQDEELTYEQLLVLETSLVLNGLNFHDQH 428

Query: 584  RDMRLDIDNMSYEELLALGEKIGTVSTGLTEEQLSNCLKRSFY-----MPASPNLKIGYV 420
            RDMRLDIDNMSYEELLAL E++GTVST LTEE LS CLK S Y       A+ NL+    
Sbjct: 429  RDMRLDIDNMSYEELLALEERMGTVSTALTEEALSECLKTSIYHSTPMEDATANLEGD-- 486

Query: 419  GDDVKCSICQEEYADGDEMATLGCDHHYHLVCIHQWLRLKNWCPICKAPAAES 261
             DD+KCSICQEEY  GDE+  L C+H YH+ CIHQWL LKNWCPICKA  A S
Sbjct: 487  KDDIKCSICQEEYVVGDEVGRLQCEHGYHMSCIHQWLSLKNWCPICKASVAPS 539


>ref|XP_004138766.1| PREDICTED: uncharacterized protein LOC101206272 [Cucumis sativus]
          Length = 549

 Score =  269 bits (687), Expect = 3e-69
 Identities = 208/564 (36%), Positives = 273/564 (48%), Gaps = 20/564 (3%)
 Frame = -1

Query: 1895 ASSHDDRSVHCNRLVCSNRHNYIKSPQVGNSDRDKTS-SSFR--ASGKAIVGSSSKPYSS 1725
            A++ D    +C+R+ CS R N  KS +   S++ K+   SFR  +SGK   GSSSK Y +
Sbjct: 27   ANNRDQEGKYCSRIGCSGRLNSPKSTRGSYSEKHKSPLQSFRTSSSGKETAGSSSKTYYA 86

Query: 1724 VTNYRKASLESSDPSSLEGTLSTETNSMHLGKVNTEPSSSTGRAQAKVPAAKYAESGVQE 1545
            V   +K+ +E+    S + T S+ET+S        +P  S       +P+ +   +G++ 
Sbjct: 87   VRGSKKSVVETQRKLSTQETDSSETSS-----TQDDPEISQ-----VIPSNEGIRTGLRV 136

Query: 1544 G------SIXXXXXXXXXXXXXXTRTQKQFNRQSGQGNQETLVGSSSRRFFGPKNTGQAA 1383
            G      +               TR ++ FN++SG  N++T   SS       K+T   A
Sbjct: 137  GLKSSNSTDDTMMEPGSSSVAPNTRGRRDFNQRSGTRNKDTPATSSV--LTASKSTRPTA 194

Query: 1382 KTASHWQSFNASRSSSSMPHTNRYGLRNLGCTSISDVLXXXXXXXXXXXXGRAEMAKRRT 1203
            +  +                  R  LRN  C SISDV+             R +MAK+R 
Sbjct: 195  RGGA-----------------GRQTLRNFRCNSISDVISSGCSSSDPNSSKRKDMAKKRN 237

Query: 1202 PDGEYXXXXXXXXXXXXXXXXXXXXXXSLAGRSLSLSERPSQPTSRRTKYWLQSRNGVTS 1023
            P+ E                          G S+S S    + TS R        NG+TS
Sbjct: 238  PEAESSSTKGKKMNGSSLERRITSSGY---GVSISDSRGAKKGTSNR-------ENGITS 287

Query: 1022 VRTRRTINEDSRSRVSETD---NTTSQFEPSVVIPQLLQS---DASVIEPGPSLSQQSVE 861
             R+R   N  SR+R        N TS  E   +I Q+ Q    D+S       +S + + 
Sbjct: 288  GRSRTLNNGTSRARSHGNRPDRNGTSLHESRSMISQVSQDHQPDSSTDNITHEVSTELIP 347

Query: 860  ELPAMGQNSYVQLGGRDENVCSSPLGHPQDGARQFNGLLIXXXXXXXXXXXGIAEVLLAL 681
            + P     SY +    +EN+       P D      GL             GIAEVLLAL
Sbjct: 348  DHPI----SYRRSDSMNENILIHRPASPAD-----IGLARSLTTRDSFRHYGIAEVLLAL 398

Query: 680  ERIEQDEELTYEQLLILETNLFLSGLGFRDHHRDMRLDIDNMSYEELLALGEKIGTVSTG 501
            ERIE +EELTYEQ+++LETNLFLSGL F D HRDMRLDIDNMSYEELLAL E++GTVST 
Sbjct: 399  ERIEHEEELTYEQVILLETNLFLSGLNFYDQHRDMRLDIDNMSYEELLALEERMGTVSTA 458

Query: 500  LTEEQLSNCLKRSFYMP-----ASPNLKIGYVGDDVKCSICQEEYADGDEMATLGCDHHY 336
            +TEE LS CL RS Y          +       D VKC ICQEEY +GDE+ TL C+H Y
Sbjct: 459  VTEEALSQCLNRSTYQSRQAEGEDTSAAGSEYEDGVKCCICQEEYLNGDEVGTLQCEHTY 518

Query: 335  HLVCIHQWLRLKNWCPICKAPAAE 264
            H  CIHQWLRLKNWCPICKA   E
Sbjct: 519  HEGCIHQWLRLKNWCPICKASVEE 542


>ref|XP_004160841.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224320
            [Cucumis sativus]
          Length = 549

 Score =  268 bits (686), Expect = 3e-69
 Identities = 208/564 (36%), Positives = 273/564 (48%), Gaps = 20/564 (3%)
 Frame = -1

Query: 1895 ASSHDDRSVHCNRLVCSNRHNYIKSPQVGNSDRDKTS-SSFR--ASGKAIVGSSSKPYSS 1725
            A++ D    +C+R+ CS R N  KS +   S++ K+   SFR  +SGK   GSSSK Y +
Sbjct: 27   ANNRDQEGKYCSRIGCSGRLNSPKSTRXYYSEKHKSPLQSFRTSSSGKETAGSSSKTYYA 86

Query: 1724 VTNYRKASLESSDPSSLEGTLSTETNSMHLGKVNTEPSSSTGRAQAKVPAAKYAESGVQE 1545
            V   +K+ +E+    S + T S+ET+S        +P  S       +P+ +   +G++ 
Sbjct: 87   VRGSKKSVVETQRKLSTQETDSSETSS-----TQDDPEISQ-----VIPSNEGIRTGLRV 136

Query: 1544 G------SIXXXXXXXXXXXXXXTRTQKQFNRQSGQGNQETLVGSSSRRFFGPKNTGQAA 1383
            G      +               TR ++ FN++SG  N++T   SS       K+T   A
Sbjct: 137  GLKSSNSTDDTMMEPGSSSVAPNTRGRRDFNQRSGTRNKDTPATSSV--LTASKSTRPTA 194

Query: 1382 KTASHWQSFNASRSSSSMPHTNRYGLRNLGCTSISDVLXXXXXXXXXXXXGRAEMAKRRT 1203
            +  +                  R  LRN  C SISDV+             R +MAK+R 
Sbjct: 195  RGGA-----------------GRQTLRNFRCNSISDVISSGCSSSDPNSSKRKDMAKKRN 237

Query: 1202 PDGEYXXXXXXXXXXXXXXXXXXXXXXSLAGRSLSLSERPSQPTSRRTKYWLQSRNGVTS 1023
            P+ E                          G S+S S    + TS R        NG+TS
Sbjct: 238  PEAESSSTKGKKMNGSSLERRITSSGY---GVSISDSRGAKKGTSNR-------ENGITS 287

Query: 1022 VRTRRTINEDSRSRVSETD---NTTSQFEPSVVIPQLLQS---DASVIEPGPSLSQQSVE 861
             R+R   N  SR+R        N TS  E   +I Q+ Q    D+S       +S + + 
Sbjct: 288  GRSRTLNNGTSRARSHGNRPDRNGTSLHESRSMISQVSQDHQPDSSTDNITHEVSTELIP 347

Query: 860  ELPAMGQNSYVQLGGRDENVCSSPLGHPQDGARQFNGLLIXXXXXXXXXXXGIAEVLLAL 681
            + P     SY +    +EN+       P D      GL             GIAEVLLAL
Sbjct: 348  DHPI----SYRRSDSMNENILIHRPASPAD-----IGLARSLTTRDSFRHYGIAEVLLAL 398

Query: 680  ERIEQDEELTYEQLLILETNLFLSGLGFRDHHRDMRLDIDNMSYEELLALGEKIGTVSTG 501
            ERIE +EELTYEQ+++LETNLFLSGL F D HRDMRLDIDNMSYEELLAL E++GTVST 
Sbjct: 399  ERIEHEEELTYEQVILLETNLFLSGLNFYDQHRDMRLDIDNMSYEELLALEERMGTVSTA 458

Query: 500  LTEEQLSNCLKRSFYMP-----ASPNLKIGYVGDDVKCSICQEEYADGDEMATLGCDHHY 336
            +TEE LS CL RS Y          +       D VKC ICQEEY +GDE+ TL C+H Y
Sbjct: 459  VTEEALSQCLNRSTYQSRQAEGEDTSAAGSEYEDGVKCCICQEEYLNGDEVGTLQCEHTY 518

Query: 335  HLVCIHQWLRLKNWCPICKAPAAE 264
            H  CIHQWLRLKNWCPICKA   E
Sbjct: 519  HEGCIHQWLRLKNWCPICKASVEE 542


Top