BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006850
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   124   4e-26
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   123   7e-26
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   120   5e-25
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   119   1e-24
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   115   1e-23

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  124 bits (310), Expect = 4e-26
 Identities = 94/312 (30%), Positives = 143/312 (45%), Gaps = 5/312 (1%)
 Frame = -3

Query: 922 PHFIKLHQTKANNNKIDNPGIVVLLNNGSEKTRFYYAEEYTACDEARVLHFPFNISYH-Y 746
           P+F+KLH  K + +   N  I++   +      F        C   + L+ P     H  
Sbjct: 38  PNFVKLH-LKHSMDTSSNLYIILRTTSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGI 96

Query: 745 EVSGICNGLICMTDF-SDVHVWNPLTCDHIAISCSPISQMPARPKNGSKHCAKNVLFGFG 569
           +V G  NGL+C+++   D+ VWNP T  H  +   PI     +   G+K C+  V FGFG
Sbjct: 97  KVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIE---LKRYFGTKSCSVYV-FGFG 152

Query: 568 FHQSTNQYKVISLIXXXXXXXXXXKFQSHVNVFTLGTGSWRTLADIPYRISLAHSSTALV 389
           +    + YK++ +            F+S V V++L   SWR + D+PY +    ++    
Sbjct: 153 YDSVRDDYKLVRIAQFGGGGKRS--FESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFA 210

Query: 388 NGALHW-FASRPGSLPWSILLSFDLKDEFFHEIPQPNGVTYAYPNXXXXXXXXXXXSMFC 212
           NGALHW     P S   +I+++ DL  E + E+ QP    Y   N             F 
Sbjct: 211 NGALHWVVGENPESNVANIVVALDLGVEDYREVLQPE---YKDKNFYIDLGVLRGCLCFL 267

Query: 211 A-LLEEDVQIWVMKEYGAVNSWTKQFKIGTTEIPEEFGWLTPLGVTNHG-EIIIKKDIWE 38
           A  L E V +W+MKEYG   SWTK F +   E+      L PL  +  G E++I+ D  +
Sbjct: 268 ANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLD 327

Query: 37  LILYDPKTNSIR 2
           L  YD K   ++
Sbjct: 328 LCWYDLKRKQVK 339


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  123 bits (308), Expect = 7e-26
 Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 9/307 (2%)
 Frame = -3

Query: 916 FIKLHQTKANNNKIDNPGIVVLLNNGSEKTRFYYAEEYTACDEARVLHFPFNI-SYHYEV 740
           FI LH +K+ ++       V++L   S      Y  +  + D  + L  P    S   +V
Sbjct: 40  FIFLHLSKSRDS-------VIILRQHSR----LYELDLNSMDRVKELDHPLMCYSNRIKV 88

Query: 739 SGICNGLICMTDFSD-VHVWNPLTCDHIAISCSPISQMPARPKNGSKHCAKNVLFGFGFH 563
            G CNGL+C+ + +D +  WNP    H  I   P+ +      N         ++GFG+ 
Sbjct: 89  LGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYD 148

Query: 562 QSTNQYKVISLIXXXXXXXXXXKFQSHVNVFTLGTGSWRTLADIPYRISLAHSSTALVNG 383
            +T+ YK++S+            F SHV ++T+ T  W+TL  +PY +  A +    V+G
Sbjct: 149 SATDDYKLVSI--SYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMPYALCCARTMGVFVSG 206

Query: 382 ALHWFASR---PGSLPWSILLSFDLKDEFFHEIPQPNGVTYAYPNXXXXXXXXXXXSMFC 212
           ALHW  +R   P S    ++++FDL+ E F E+  P  V     +            M C
Sbjct: 207 ALHWVVTRDLEPESR--DLIVAFDLRFEVFREVALPGTV-----DGKFDMDVALLRGMLC 259

Query: 211 ALL---EEDVQIWVMKEYGAVNSWTKQFKIGTTEIPEEFGWLTPLGVTNHGE-IIIKKDI 44
            +     +   +WVM+EYG+ +SW K F +G     +    L PLG + +G+ ++ ++D 
Sbjct: 260 IIENRGSDGFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDS 319

Query: 43  WELILYD 23
            +L  Y+
Sbjct: 320 KKLCWYN 326


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  120 bits (301), Expect = 5e-25
 Identities = 92/316 (29%), Positives = 141/316 (44%), Gaps = 4/316 (1%)
 Frame = -3

Query: 940 RLLTMDPHFIKLHQTKANNNKIDNPGIVVLLNNGSEKTRFYYAEEYTACDEARVLHFPFN 761
           R L   P FI LH     N+ I++P  + ++   SE     Y+  +   D  + L  P  
Sbjct: 32  RTLIDSPTFIYLHL----NHSIESPCNLSIILKSSE----LYSLSFDLLDNIQPLDHPLM 83

Query: 760 ISYH-YEVSGICNGLICMTDF-SDVHVWNPLTCDHIAISCSPISQMPARPKNGSKHCAKN 587
              H  ++ G CNGL+C+ +   D+ +WNP    H  +   P+     +   G   C  +
Sbjct: 84  CYNHGVKILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVE---LKRYFGMCSCRVS 140

Query: 586 VLFGFGFHQSTNQYKVISLIXXXXXXXXXXKFQSHVNVFTLGTGSWRTLADIPYRISLAH 407
           V FGFG+  S + YK++ +            F+S V VF+L   SWR +AD+PY +    
Sbjct: 141 V-FGFGYDLSNDDYKLVRIAQFGGVDRKS--FESEVKVFSLRKNSWRRIADMPYCVLYPG 197

Query: 406 SSTALVNGALHWFASR-PGSLPWSILLSFDLKDEFFHEIPQPNGVTYAYPNXXXXXXXXX 230
            +    NGALHW  S+ P S     +++ DL  E +H +P+P  V               
Sbjct: 198 ENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNC--NMGVGVLQG 255

Query: 229 XXSMFCALLEEDVQIWVMKEYGAVNSWTKQFKIGTTEIPEEFGWLTPLGVTNHG-EIIIK 53
             S+      E V +WVM+EY    SW+K F +   E+      L PL  +  G E++I+
Sbjct: 256 CLSLLAYARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIE 315

Query: 52  KDIWELILYDPKTNSI 5
            D   L  YD K   +
Sbjct: 316 HDNVNLFWYDLKRKEV 331


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
            gi|223528011|gb|EEF30092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  119 bits (298), Expect = 1e-24
 Identities = 99/346 (28%), Positives = 152/346 (43%), Gaps = 33/346 (9%)
 Frame = -3

Query: 940  RLLTMDPHFIKLHQTKANNNKIDNPGIVVLLNNGSEKTRFYYAEEYTACDEA---RVLHF 770
            R L   P    +H ++  NN   N   ++LL +   K+  Y +  ++A DE     V   
Sbjct: 54   RSLVQHPLLASMHFSRIANN---NDPCLLLLCDLPIKSHLY-SLHFSALDETIIETVTRI 109

Query: 769  PFNISYHYEVSGICNGLICMTDFSDV---HVWNPLTCDHIAISCSPISQMPARPKNGSKH 599
            P  +   + V G CNGL+ + D       +++NP T D++ +           P+ G   
Sbjct: 110  PVPVIPKFLVIGSCNGLLYLLDSLQQRANYIYNPFTSDYLEL-----------PEPGQVL 158

Query: 598  CAKNVLFGFGFHQSTNQYKVISLIXXXXXXXXXXKFQ--------SHVNVFTLGTGS--W 449
                V  GFGFH +T +YKV+ ++           FQ        S V V T+G GS  W
Sbjct: 159  NQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTW 218

Query: 448  RTLADIPYRISLAHSSTALVNGALHWFASRPGSLPWSILLSFDLKDEFFHEIPQPNGVTY 269
            R+  +  Y++ L + S  +VNG LHW + R  +     L+SFDL DE F E+P P G ++
Sbjct: 219  RSKGETSYQL-LGNPSHVVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREVPCPVGASF 277

Query: 268  AYPNXXXXXXXXXXXSMFCALLEEDVQIWVMKEYGAVNSWTKQFKIGTTEIPEEF----- 104
                            +        + IWVMKEYG   SW K+F IG  ++P E      
Sbjct: 278  GRHCSHLATLRGCLSGVVQGF--RRLYIWVMKEYGVKESWVKEFTIG-VKLPRELEPYPN 334

Query: 103  ------GWLTPLGVT------NHGEIIIKKDIWELILYDPKTNSIR 2
                   +  PL  T      N+GEI+++     L+ YD K+ + +
Sbjct: 335  QSINLQEFHLPLSQTKVLCLLNNGEILLEFRCGTLVCYDTKSGAFK 380


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  115 bits (288), Expect = 1e-23
 Identities = 83/234 (35%), Positives = 116/234 (49%), Gaps = 12/234 (5%)
 Frame = -3

Query: 793 DEARVLHFPFNISY-HYEVSGICNGLICMTD--FSD-VHVWNPLTCDHIAISCSPISQMP 626
           D  R L  PF  S   +EV G CNGL+C+ D  F D V+V NP T D          Q+P
Sbjct: 106 DMVRKLTIPFWASMPEFEVVGSCNGLLCLADSLFKDAVYVHNPFTRD--------FKQLP 157

Query: 625 ARPKNGSKHCAKNVLFGFGFHQSTNQYKVISLIXXXXXXXXXXKF------QSHVNVFTL 464
                  ++  + V+FGFG+H  T  YKV+ ++          +F      QS V V TL
Sbjct: 158 ----KSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTL 213

Query: 463 GTGSWRTLADIPYRISLAHSSTALVNGALHWFASRPGSLPWSILLSFDLKDEFFHEIPQP 284
           G+ +WR+L  + Y++     S ALVNG LHW  +RP       ++SFDL DE F EIP+P
Sbjct: 214 GSPTWRSLGKVSYQLD-RWPSEALVNGRLHW-VTRPRRYVTRFIVSFDLADEQFREIPKP 271

Query: 283 NGVTYAYPNXXXXXXXXXXXSMFCALLEED--VQIWVMKEYGAVNSWTKQFKIG 128
           +    +  N            +  A+   +  +++WVMKEY    SW K+F IG
Sbjct: 272 DCGGLSRCN---YHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFNIG 322