BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006849
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   117   3e-24
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   115   2e-23
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...   112   1e-22
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   107   3e-21
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   107   5e-21

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score =  117 bits (294), Expect = 3e-24
 Identities = 95/312 (30%), Positives = 150/312 (48%), Gaps = 30/312 (9%)
 Frame = -2

Query: 856 VVLRNDGLEKTRFYYAEDYTACDEARV----LDFPFDNTSFKSYYISGVCNGLICLTDY- 692
           V+L  D   +   Y+  D+ A +E +     +  PF ++    + + G CNGL+CL+D  
Sbjct: 80  VILHCDFPIRNNLYFV-DFAAHEEEKEKVKRIRAPF-SSMMPEFEVVGSCNGLLCLSDSL 137

Query: 691 --HNVFVWNPLTCDHIFISCSQFASQISGSAVKRYPQKKSILFGFGFHQGTNQYKVIRLV 518
              +++++NP T  +  +  S            +YP ++ ++FGFGF+  TN+YKVIR+V
Sbjct: 138 FNDSLYIYNPFTGRYKELPKSL-----------QYPDQE-VVFGFGFNPKTNEYKVIRIV 185

Query: 517 STPPFMFSAGRSH------SQVSVFSLGTDSWRTLVEIPYCISRLRSSIVLVNGALHWFA 356
                     RS       SQV + +LG   WR+L ++ Y + R R+S  LVNG LHW +
Sbjct: 186 YYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVR-RASETLVNGRLHWVS 244

Query: 355 IRAGSSPWNIILSFDVKDEVFHEIPQPN-GVTNXXXXXXXXXXXXXXXXLFCALRDDLQI 179
               + P   ++SFD+ DE F E+P+P+ G  N                ++C     L+I
Sbjct: 245 RPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCNY-GRLEI 303

Query: 178 WVMEEYGVLDSWTKQFKIG-------KPEVPGPF---------ASMDPLGVANNGGIILW 47
           WVM+EY V +SW K++ IG       K  +  P           ++  L V  NG I+L 
Sbjct: 304 WVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLE 363

Query: 46  KSTWELILYCPK 11
                L+ Y PK
Sbjct: 364 YKNRALVSYDPK 375


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  115 bits (287), Expect = 2e-23
 Identities = 79/264 (29%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
 Frame = -2

Query: 814 YAEDYTACDEARVLDFPFDNTSFKSYYISGVCNGLICLTDY-HNVFVWNPLTCDHIFISC 638
           Y  D  + D  + LD P    S +   + G CNGL+C+ +   ++  WNP    H  I  
Sbjct: 62  YELDLNSMDRVKELDHPLMCYSNR-IKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPS 120

Query: 637 SQFASQISGSAVKRYPQKKSILFGFGFHQGTNQYKVIRLVSTPPFMFSAGRSH-SQVSVF 461
                + +           + ++GFG+   T+ YK   LVS   F+    RS  S V ++
Sbjct: 121 EPLIRKETNENNTITTLLAAHVYGFGYDSATDDYK---LVSISYFVDLHNRSFDSHVKIY 177

Query: 460 SLGTDSWRTLVEIPYCISRLRSSIVLVNGALHWFAIR-AGSSPWNIILSFDVKDEVFHEI 284
           ++ TD W+TL  +PY +   R+  V V+GALHW   R       ++I++FD++ EVF E+
Sbjct: 178 TMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREV 237

Query: 283 PQPNGVTNXXXXXXXXXXXXXXXXLFCALR----DDLQIWVMEEYGVLDSWTKQFKIGKP 116
             P  V                    C +     D   +WVM EYG  DSW K F +G+P
Sbjct: 238 ALPGTVDGKFDMDVALLRGM-----LCIIENRGSDGFDVWVMREYGSHDSWCKMFTVGQP 292

Query: 115 EVPGPFASMDPLGVANNGGIILWK 44
                  S+ PLG + NG  +L++
Sbjct: 293 RDVKLMKSLKPLGYSRNGDKVLFE 316


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score =  112 bits (280), Expect = 1e-22
 Identities = 70/220 (31%), Positives = 115/220 (52%), Gaps = 5/220 (2%)
 Frame = -2

Query: 766 PFDNTSFKSYYISGVCNGLICLTDY---HNVFVWNPLTCDHIFISCSQFASQISGSAVKR 596
           PF  T    Y + G CNG +CL+D     N+F++NP T D++ +  S+  S         
Sbjct: 84  PFAAT-MPEYDVVGSCNGFLCLSDSLYNENLFIYNPFTRDYLELPKSKDFSN-------- 134

Query: 595 YPQKKSILFGFGFHQGTNQYKVIRLVSTPPFMFSAGR-SHSQVSVFSLGTDSWRTLVEIP 419
                 +++G GFH  T + K++++V +  F     R  HS+V VF+LGT +WR++  I 
Sbjct: 135 ----PDVVYGIGFHPQTKRLKILKIVYSKGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIF 190

Query: 418 YCISRLRSSIVLVNGALHWFAIRAGSSPWNIILSFDVKDEVFHEIPQPN-GVTNXXXXXX 242
           + +++ +S    +NG LHW ++         I+SFD+  E F +IP+P+ G  +      
Sbjct: 191 HHLAQGQSPAA-INGRLHWVSLPRRHYVGRTIVSFDLASEEFIDIPKPDYGSLSRCNFQL 249

Query: 241 XXXXXXXXXXLFCALRDDLQIWVMEEYGVLDSWTKQFKIG 122
                     ++C+    ++IWVME+YGV +SW K F IG
Sbjct: 250 MNLNDCLSAVVYCSY-GKMEIWVMEQYGVKESWVKSFNIG 288


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score =  107 bits (268), Expect = 3e-21
 Identities = 88/298 (29%), Positives = 139/298 (46%), Gaps = 30/298 (10%)
 Frame = -2

Query: 814 YAEDYTACDEARV----LDFPFDNTSFKSYYISGVCNGLICLTDY---HNVFVWNPLTCD 656
           Y  D+ A +E +     +  PF ++    + + G CNGL+CL+D     +++++NP T  
Sbjct: 94  YFVDFAAHEEEKEKVKRIPAPF-SSMMPEFEVVGSCNGLLCLSDSLYNDSLYIYNPFTGC 152

Query: 655 HIFISCSQFASQISGSAVKRYPQKKSILFGFGFHQGTNQYKVIRLVSTPPFMFSAGRSH- 479
           +  +  S            +YP ++ ++ GFGF+  T +YKVIR+V          RS  
Sbjct: 153 YKELPKSL-----------QYPDQE-VVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRR 200

Query: 478 -----SQVSVFSLGTDSWRTLVEIPYCISRLRSSIVLVNGALHWFAIRAGSSPWNIILSF 314
                S+V + +LG   WR+L ++ Y + R R+S  LVNG LHW +    + P   ++SF
Sbjct: 201 IIYPLSEVQILTLGCPEWRSLGKVSYRLVR-RASGALVNGRLHWISRPCRNKPARRLVSF 259

Query: 313 DVKDEVFHEIPQPN-GVTNXXXXXXXXXXXXXXXXLFCALRDDLQIWVMEEYGVLDSWTK 137
           D+ DE F E+ +P+ G  N                ++C     L+IWVM+EY V +SW K
Sbjct: 260 DLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVYCNY-GRLEIWVMKEYNVKESWVK 318

Query: 136 QFKIGKPEVPGPFASMD----------------PLGVANNGGIILWKSTWELILYCPK 11
           ++ IG     G   + D                 L V  NG I+L      L+ Y PK
Sbjct: 319 EYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPK 376


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  107 bits (266), Expect = 5e-21
 Identities = 79/232 (34%), Positives = 110/232 (47%), Gaps = 9/232 (3%)
 Frame = -2

Query: 790 DEARVLDFPFDNTSFKSYYISGVCNGLICLTDY---HNVFVWNPLTCDHIFISCSQFASQ 620
           D  R L  PF   S   + + G CNGL+CL D      V+V NP T D           Q
Sbjct: 106 DMVRKLTIPFW-ASMPEFEVVGSCNGLLCLADSLFKDAVYVHNPFTRDF---------KQ 155

Query: 619 ISGSAVKRYPQKKSILFGFGFHQGTNQYKVIRLVSTPPFMFSAGR------SHSQVSVFS 458
           +  S   +YP ++ ++FGFG+H  T  YKV+++V          R      S S+V V +
Sbjct: 156 LPKSL--QYPDQE-VVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLT 212

Query: 457 LGTDSWRTLVEIPYCISRLRSSIVLVNGALHWFAIRAGSSPWNIILSFDVKDEVFHEIPQ 278
           LG+ +WR+L ++ Y + R  S   LVNG LHW   R        I+SFD+ DE F EIP+
Sbjct: 213 LGSPTWRSLGKVSYQLDRWPSE-ALVNGRLHWVT-RPRRYVTRFIVSFDLADEQFREIPK 270

Query: 277 PNGVTNXXXXXXXXXXXXXXXXLFCALRDDLQIWVMEEYGVLDSWTKQFKIG 122
           P+                            L++WVM+EY V +SW K+F IG
Sbjct: 271 PDCGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFNIG 322