BLASTX nr result

ID: Cimicifuga21_contig00006793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006793
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274325.2| PREDICTED: uncharacterized protein LOC100242...   352   1e-94
ref|XP_002319380.1| predicted protein [Populus trichocarpa] gi|2...   331   2e-88
emb|CBI28387.3| unnamed protein product [Vitis vinifera]              328   2e-87
ref|XP_002517989.1| conserved hypothetical protein [Ricinus comm...   310   6e-82
ref|NP_567800.1| embryo defective 1923 protein [Arabidopsis thal...   293   9e-77

>ref|XP_002274325.2| PREDICTED: uncharacterized protein LOC100242621 [Vitis vinifera]
          Length = 357

 Score =  352 bits (904), Expect = 1e-94
 Identities = 174/287 (60%), Positives = 207/287 (72%), Gaps = 3/287 (1%)
 Frame = -3

Query: 1089 QRNLAFSSSAQNGEEGETKSVVDEFEEDRGESTMPSRFRYLTKEAPDRPVRWPWLIAVAF 910
            +R L F ++A+NGEE    S  +  EE R +STMP RFR+LTKEAPD P+RWPW IA+ F
Sbjct: 70   RRKLGFCANAENGEEKSNGSGFEGIEEARRQSTMPERFRHLTKEAPDPPLRWPWYIALVF 129

Query: 909  GIYAWRTVLWELSNWKKGALAVAQFIGYLSKFALAIVFHFIGTPITSLIRCIETALYTIR 730
             +YAWRTVLWELSNW+K ALAV  F GYL K ALA++FHFIG P+TSLIRC+ETALYTIR
Sbjct: 130  LVYAWRTVLWELSNWRKAALAVVYFAGYLLKLALALIFHFIGNPVTSLIRCVETALYTIR 189

Query: 729  SIYSGIVAAAPVQXXXXXXXXXXXXXXXXXXAVPDSANSQPYLLTLAGIIGFAAVTDFIP 550
            + YS IV  APV                    VPDS NSQPYLLT++G+IGFAAV DFI 
Sbjct: 190  AFYSSIVTYAPVPELTTIIILASAVLAIAEATVPDSVNSQPYLLTVSGLIGFAAVKDFIS 249

Query: 549  ELLFWLLLMGILCFSRFFKKRDLVSSTWPVAAALSAVGQPWLRLVVMTSYIALAVFHHSK 370
            E  FW LL+G+  F++  KKRD VSS  PVAA L+AVGQPWLR+VV+ SY ALA+ HHSK
Sbjct: 250  EPFFWTLLVGLFAFAQLVKKRDYVSSALPVAAVLAAVGQPWLRVVVIASYTALAISHHSK 309

Query: 369  KL---HSDVEAASTSKKLPAPLLVAGLTIGIHVAAKWIRYRHLTWMI 238
            K+     + E A+TS++LP PLL   L IGIH+AAKW  YRHLTWMI
Sbjct: 310  KISDGKEEGEVAATSRRLPVPLLCVSLAIGIHLAAKWAGYRHLTWMI 356


>ref|XP_002319380.1| predicted protein [Populus trichocarpa] gi|222857756|gb|EEE95303.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  331 bits (849), Expect = 2e-88
 Identities = 168/303 (55%), Positives = 210/303 (69%), Gaps = 6/303 (1%)
 Frame = -3

Query: 1128 QSIEFSGFSLKPFQRNLAFSSSAQNGE-EGETKSVVDEFEEDRGESTMPSRFRYLTKEAP 952
            Q ++  G  L    R L F  +A+NGE E E   V D+ E  RGESTMP RFRYLTKEAP
Sbjct: 48   QPLKRFGLFLDSRDRKLGFRVNAENGEGESERDGVFDDGE--RGESTMPERFRYLTKEAP 105

Query: 951  DRPVRWPWLIAVAFGIYAWRTVLWELSNWKKGALAVAQFIGYLSKFALAIVFHFIGTPIT 772
            D PVRWPW +A+ F IYAWR VL+EL NWK+G +A+  F+GYL K  LA+VFHFIG PIT
Sbjct: 106  DPPVRWPWFVALGFLIYAWRAVLFELGNWKRGVIAIIGFVGYLLKLLLAVVFHFIGDPIT 165

Query: 771  SLIRCIETALYTIRSIYSGIVAAAPVQXXXXXXXXXXXXXXXXXXAVPDSANSQPYLLTL 592
            SLIRCIETA+YT ++ YSGIV +APV                   A P+S + QPYLLT+
Sbjct: 166  SLIRCIETAIYTFQAFYSGIVRSAPVPELTLIIMLASAVLAIGEAAAPNSVSRQPYLLTV 225

Query: 591  AGIIGFAAVTDFIPELLFWLLLMGILCFSRFFKKRDLVSSTWPVAAALSAVGQPWLRLVV 412
            +G+IG+AAV ++I E LFW LL+G+  FSRF KKRD V+S  P AA L+A+G+PW+R++V
Sbjct: 226  SGLIGYAAVRNYISEPLFWTLLLGLYAFSRFIKKRDDVTSALPAAAVLAAIGEPWVRVLV 285

Query: 411  MTSYIALAVFHHSKKL-----HSDVEAASTSKKLPAPLLVAGLTIGIHVAAKWIRYRHLT 247
            M SY+ALA+ +HSK+L       +V  A T  ++P PLL A L IGIHVAAKW  YRHLT
Sbjct: 286  MVSYLALAISYHSKQLAKGKEEVEVVTADTGSRVPVPLLCAALAIGIHVAAKWAGYRHLT 345

Query: 246  WMI 238
            WM+
Sbjct: 346  WML 348


>emb|CBI28387.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  328 bits (841), Expect = 2e-87
 Identities = 160/254 (62%), Positives = 187/254 (73%), Gaps = 3/254 (1%)
 Frame = -3

Query: 990 MPSRFRYLTKEAPDRPVRWPWLIAVAFGIYAWRTVLWELSNWKKGALAVAQFIGYLSKFA 811
           MP RFR+LTKEAPD P+RWPW IA+ F +YAWRTVLWELSNW+K ALAV  F GYL K A
Sbjct: 1   MPERFRHLTKEAPDPPLRWPWYIALVFLVYAWRTVLWELSNWRKAALAVVYFAGYLLKLA 60

Query: 810 LAIVFHFIGTPITSLIRCIETALYTIRSIYSGIVAAAPVQXXXXXXXXXXXXXXXXXXAV 631
           LA++FHFIG P+TSLIRC+ETALYTIR+ YS IV  APV                    V
Sbjct: 61  LALIFHFIGNPVTSLIRCVETALYTIRAFYSSIVTYAPVPELTTIIILASAVLAIAEATV 120

Query: 630 PDSANSQPYLLTLAGIIGFAAVTDFIPELLFWLLLMGILCFSRFFKKRDLVSSTWPVAAA 451
           PDS NSQPYLLT++G+IGFAAV DFI E  FW LL+G+  F++  KKRD VSS  PVAA 
Sbjct: 121 PDSVNSQPYLLTVSGLIGFAAVKDFISEPFFWTLLVGLFAFAQLVKKRDYVSSALPVAAV 180

Query: 450 LSAVGQPWLRLVVMTSYIALAVFHHSKKL---HSDVEAASTSKKLPAPLLVAGLTIGIHV 280
           L+AVGQPWLR+VV+ SY ALA+ HHSKK+     + E A+TS++LP PLL   L IGIH+
Sbjct: 181 LAAVGQPWLRVVVIASYTALAISHHSKKISDGKEEGEVAATSRRLPVPLLCVSLAIGIHL 240

Query: 279 AAKWIRYRHLTWMI 238
           AAKW  YRHLTWMI
Sbjct: 241 AAKWAGYRHLTWMI 254


>ref|XP_002517989.1| conserved hypothetical protein [Ricinus communis]
            gi|223542971|gb|EEF44507.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 350

 Score =  310 bits (794), Expect = 6e-82
 Identities = 155/290 (53%), Positives = 201/290 (69%), Gaps = 7/290 (2%)
 Frame = -3

Query: 1086 RNLAFSSSAQNGEEGETKSVVDEFEED----RGESTMPSRFRYLTKEAPDRPVRWPWLIA 919
            +NL    +A  GE   + SVVD+ ++     RGESTMP RFRYLTKEAPD PVRWPW IA
Sbjct: 62   KNLGLCLNAGKGER--SNSVVDDNDDAEILARGESTMPERFRYLTKEAPDPPVRWPWFIA 119

Query: 918  VAFGIYAWRTVLWELSNWKKGALAVAQFIGYLSKFALAIVFHFIGTPITSLIRCIETALY 739
            + F +YAWR VL+EL+NWK GALAV  F+ YL K  LA++FHFIG P+TSLIR +ET +Y
Sbjct: 120  LGFLVYAWRAVLFELANWKNGALAVVSFVSYLLKLLLAVIFHFIGDPVTSLIRFLETLIY 179

Query: 738  TIRSIYSGIVAAAPVQXXXXXXXXXXXXXXXXXXAVPDSANSQPYLLTLAGIIGFAAVTD 559
             +R+ YSGIV+ APV                   A P+S  SQPYLLT++G+IG+AAV +
Sbjct: 180  MVRAYYSGIVSYAPVPELTTIIVLSSAVLAIAEAAAPNSITSQPYLLTISGLIGYAAVRN 239

Query: 558  FIPELLFWLLLMGILCFSRFFKKRDLVSSTWPVAAALSAVGQPWLRLVVMTSYIALAVFH 379
            +I E LFW LL+G+  FS  FK+RD V+S  P AA L+A+G+PW+R++VM +Y+ALA+ H
Sbjct: 240  YISEPLFWTLLLGLYGFSLLFKRRDHVTSALPSAAVLAAIGEPWVRVLVMFAYLALAISH 299

Query: 378  HSKKL---HSDVEAASTSKKLPAPLLVAGLTIGIHVAAKWIRYRHLTWMI 238
            HS+KL     +V   +T +K+P PL  A L IGI +AAKW  YRHLTWM+
Sbjct: 300  HSRKLIEGKEEVNVVATGRKVPVPLFCAALAIGIRLAAKWAGYRHLTWMV 349


>ref|NP_567800.1| embryo defective 1923 protein [Arabidopsis thaliana]
            gi|7269675|emb|CAB79623.1| hypothetical protein
            [Arabidopsis thaliana] gi|94442403|gb|ABF18989.1|
            At4g28210 [Arabidopsis thaliana]
            gi|110741712|dbj|BAE98802.1| hypothetical protein
            [Arabidopsis thaliana] gi|332660054|gb|AEE85454.1| embryo
            defective 1923 protein [Arabidopsis thaliana]
          Length = 348

 Score =  293 bits (749), Expect = 9e-77
 Identities = 140/274 (51%), Positives = 187/274 (68%)
 Frame = -3

Query: 1059 QNGEEGETKSVVDEFEEDRGESTMPSRFRYLTKEAPDRPVRWPWLIAVAFGIYAWRTVLW 880
            +N  +G  +   + F   R ESTMP RFRYLTKEAPD P+ WPW +A+ F +YAWR VL+
Sbjct: 76   ENAPKGGIEDDAERFA--RRESTMPDRFRYLTKEAPDSPIIWPWFVALGFLVYAWRAVLF 133

Query: 879  ELSNWKKGALAVAQFIGYLSKFALAIVFHFIGTPITSLIRCIETALYTIRSIYSGIVAAA 700
            ELSNW+K A A+  F+G LSKFALA+VFHFIG PITSLI  +ETA+Y++R+ YSGIVA  
Sbjct: 134  ELSNWRKAAFAILAFVGDLSKFALALVFHFIGDPITSLISLVETAMYSVRAFYSGIVAYT 193

Query: 699  PVQXXXXXXXXXXXXXXXXXXAVPDSANSQPYLLTLAGIIGFAAVTDFIPELLFWLLLMG 520
            PV+                    P+S + QPY++T+AG++G+AAV  +I E  FW +L+G
Sbjct: 194  PVRELTTVILLASSVLAIGEAVAPESISKQPYVVTIAGLVGYAAVQSYISEPFFWTVLLG 253

Query: 519  ILCFSRFFKKRDLVSSTWPVAAALSAVGQPWLRLVVMTSYIALAVFHHSKKLHSDVEAAS 340
            +  +SR  KKRD V+S  P AA L+ VG+PW+R+V +T Y+ALA++H+S K  S+ E+  
Sbjct: 254  LYGYSRLIKKRDDVTSALPSAAVLAGVGEPWVRVVAITGYLALAMYHNSTKTSSEEESQI 313

Query: 339  TSKKLPAPLLVAGLTIGIHVAAKWIRYRHLTWMI 238
              +  P PLL A L IG+ +AAKW  YRHLTWMI
Sbjct: 314  LRRAPPMPLLAAALAIGVRLAAKWAGYRHLTWMI 347


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