BLASTX nr result

ID: Cimicifuga21_contig00006785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006785
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32677.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloro...   178   5e-43
ref|XP_004168693.1| PREDICTED: diaminopimelate epimerase, chloro...   171   1e-40
ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloro...   171   1e-40
ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus...   168   7e-40

>emb|CBI32677.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  178 bits (452), Expect = 5e-43
 Identities = 86/96 (89%), Positives = 90/96 (93%)
 Frame = +2

Query: 284 EAPLKTLKSSFLDRKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDRNFGV 463
           EA  K  ++SFLDRKESGFLHFVKYHGLGNDFILVDNRDS EPK+TPEQAVKLCDRNFG+
Sbjct: 4   EALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDRNFGI 63

Query: 464 GADGVIFAMPGINGTDYTMRIFNSDGSEPEMRGNGV 571
           GADGVIFAMPGINGTDYTMRIFNSDGSEPEM GNGV
Sbjct: 64  GADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGV 99


>ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloroplastic [Vitis
           vinifera]
          Length = 370

 Score =  178 bits (452), Expect = 5e-43
 Identities = 86/96 (89%), Positives = 90/96 (93%)
 Frame = +2

Query: 284 EAPLKTLKSSFLDRKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDRNFGV 463
           EA  K  ++SFLDRKESGFLHFVKYHGLGNDFILVDNRDS EPK+TPEQAVKLCDRNFG+
Sbjct: 67  EALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDRNFGI 126

Query: 464 GADGVIFAMPGINGTDYTMRIFNSDGSEPEMRGNGV 571
           GADGVIFAMPGINGTDYTMRIFNSDGSEPEM GNGV
Sbjct: 127 GADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGV 162


>ref|XP_004168693.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 201

 Score =  171 bits (432), Expect = 1e-40
 Identities = 80/96 (83%), Positives = 85/96 (88%)
 Frame = +2

Query: 284 EAPLKTLKSSFLDRKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDRNFGV 463
           E   K    SFLDR+ESG LHFVKYHGLGNDFILVDNRDS EP++TPEQA KLCDRNFG+
Sbjct: 60  EVTEKAPSFSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGI 119

Query: 464 GADGVIFAMPGINGTDYTMRIFNSDGSEPEMRGNGV 571
           GADGVIFAMPG+NGTDYTMRIFNSDGSEPEM GNGV
Sbjct: 120 GADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGV 155


>ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Cucumis
           sativus]
          Length = 364

 Score =  171 bits (432), Expect = 1e-40
 Identities = 80/96 (83%), Positives = 85/96 (88%)
 Frame = +2

Query: 284 EAPLKTLKSSFLDRKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDRNFGV 463
           E   K    SFLDR+ESG LHFVKYHGLGNDFILVDNRDS EP++TPEQA KLCDRNFG+
Sbjct: 60  EVTEKAPSFSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGI 119

Query: 464 GADGVIFAMPGINGTDYTMRIFNSDGSEPEMRGNGV 571
           GADGVIFAMPG+NGTDYTMRIFNSDGSEPEM GNGV
Sbjct: 120 GADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGV 155


>ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus communis]
           gi|223527214|gb|EEF29378.1| Diaminopimelate epimerase,
           putative [Ricinus communis]
          Length = 369

 Score =  168 bits (425), Expect = 7e-40
 Identities = 79/96 (82%), Positives = 86/96 (89%)
 Frame = +2

Query: 284 EAPLKTLKSSFLDRKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPEQAVKLCDRNFGV 463
           EAP K   +SFLDR+ESG  HFVKY GLGNDFILVDNRDS EP++TPEQAV+LCDRNFG+
Sbjct: 66  EAPEKISTASFLDRRESGIHHFVKYQGLGNDFILVDNRDSTEPRITPEQAVRLCDRNFGI 125

Query: 464 GADGVIFAMPGINGTDYTMRIFNSDGSEPEMRGNGV 571
           GADGVIFAMPG NGTDY+MRIFNSDGSEPEM GNGV
Sbjct: 126 GADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGV 161


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