BLASTX nr result

ID: Cimicifuga21_contig00006740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006740
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257...    86   2e-15
gb|ACP27605.1| remorin-like protein [Dimocarpus longan]                81   1e-13
ref|XP_004142866.1| PREDICTED: uncharacterized protein LOC101202...    80   2e-13
gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]                   80   2e-13
ref|XP_002510204.1| DNA binding protein, putative [Ricinus commu...    76   3e-12

>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
           gi|302142306|emb|CBI19509.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = -1

Query: 310 MLGLGFHDQKNNQKPSASPRSGFKARDDSPDSVIFTQEXXXXXXXXXXXSVDRCSFASDV 131
           M  LGF DQ       +  R G  ARD SPDSVIFTQE           SVDRCSFASDV
Sbjct: 1   MAELGFQDQ-------SLLRFGLGARDASPDSVIFTQESNFSLFSSASASVDRCSFASDV 53

Query: 130 HDHEALVSELSKHLSG---SECSSGPDLDPNNRSAVRKGSHI 14
           HDH++L SE+S HL+G    E SSGPDL P N++ V K S +
Sbjct: 54  HDHDSLASEVSLHLAGHDLQETSSGPDLIP-NKATVHKHSRL 94


>gb|ACP27605.1| remorin-like protein [Dimocarpus longan]
          Length = 361

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
 Frame = -1

Query: 259 SPRSGFKARDDSPDSVIFTQEXXXXXXXXXXXSVDRCSFASDVHDHEALVSELSKHLSGS 80
           S RSG++ARD SPDSVIFT E           SVDRCSFASD HDH++L SE+S HL+G 
Sbjct: 7   SMRSGYRARDTSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDHDSLASEISLHLAGQ 66

Query: 79  E--------CSSGPDLDPNNRSAVRKGSH 17
           +         S GPD DP +       +H
Sbjct: 67  DRENHQQESSSGGPDRDPESNKHSNNNNH 95


>ref|XP_004142866.1| PREDICTED: uncharacterized protein LOC101202771 [Cucumis sativus]
           gi|449518785|ref|XP_004166416.1| PREDICTED:
           uncharacterized LOC101202771 [Cucumis sativus]
          Length = 589

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
 Frame = -1

Query: 313 KMLGLGFHDQKNNQKPSASPRSGFKARDDSPDSVIFTQEXXXXXXXXXXXSVDRCSFASD 134
           K+  +GF DQ      +AS R GF+ARD SPDSVI+  E           SV+RCSFAS+
Sbjct: 8   KVPEMGFQDQ------TASSRPGFRARDSSPDSVIYALESSFSLFSSASASVERCSFASE 61

Query: 133 VHDHEALVSELSKHLSG-----SECSSGPDLDPNNRSAVRKGSHI 14
            HD ++L+SE+S HL+G      E   GPD DPN  +   K S +
Sbjct: 62  AHDRDSLISEISLHLAGHDEGNHESCGGPDPDPNKPALSNKHSRL 106


>gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]
          Length = 565

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
 Frame = -1

Query: 253 RSGFKARDDSPDSVIFTQEXXXXXXXXXXXSVDRCSFASDVHDHEALVSELSKHLSGSE- 77
           RSG++ARD SPDSVIFT E           SVDRCSFASD HDH++L SE+S HL+G + 
Sbjct: 2   RSGYRARDASPDSVIFTLESNFSLFSSASASVDRCSFASDAHDHDSLASEISLHLAGQDR 61

Query: 76  -------CSSGPDLDPNNRSAVRKGSH 17
                   S GPD DP +       +H
Sbjct: 62  ENHQQESSSGGPDRDPESNKHSNNNNH 88


>ref|XP_002510204.1| DNA binding protein, putative [Ricinus communis]
           gi|223550905|gb|EEF52391.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 601

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
 Frame = -1

Query: 262 ASPRSGFKARDDSPDSVIFTQEXXXXXXXXXXXSVDRCSFASDVHDHEALVSELSKHLSG 83
           +S RSG++ARD SPDSVIFT E           SVDRCSFASD HD ++L SE+S HL+G
Sbjct: 10  SSSRSGYRARDASPDSVIFTLESNFSLFSSASASVDRCSFASDAHDRDSLASEISLHLAG 69

Query: 82  SECS-------------SGPDLDPNNRSAVRKGSH 17
            E               SGPD DP+    V   S+
Sbjct: 70  HEVGSGVGGGNELRETLSGPDRDPDPNKLVIHSSN 104


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