BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006716
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96525.1| retrotransposon protein, putative, Ty3-gypsy sub-...    99   3e-19
gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subc...    99   4e-19
gb|AAV35799.1| retrotransposon protein, putative, Ty3-gypsy sub-...    99   4e-19
gb|AAR06317.1| putative polyprotein [Oryza sativa Japonica Group]      99   4e-19
gb|AAV59390.1| hypothetical protein [Oryza sativa Japonica Group...    99   5e-19

>gb|AAX96525.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550230|gb|ABA93027.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1506

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/74 (59%), Positives = 60/74 (81%)
 Frame = +3

Query: 3    GKLAPRFIGPYRILEKVGELAYRLELPERMRMIHNVFHVSMLRRCLKRDEDVVTPTEIDL 182
            GKLAPRF+GPYRILE+ GE+AY+LELP  M  IHNVFHVS L++CL+  E+ V+P  I++
Sbjct: 1378 GKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHNVFHVSQLKKCLRVPEEQVSPDHIEI 1437

Query: 183  DENLSFVTRPVRVL 224
             E+L++V +P R+L
Sbjct: 1438 QEDLTYVEKPTRIL 1451


>gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1522

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/74 (58%), Positives = 60/74 (81%)
 Frame = +3

Query: 3    GKLAPRFIGPYRILEKVGELAYRLELPERMRMIHNVFHVSMLRRCLKRDEDVVTPTEIDL 182
            GKLAPRF+GPYRILE+ GE+AY+LELP  M  IHNVFHVS L++CL+  E+  +P  I++
Sbjct: 1394 GKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHNVFHVSQLKKCLRVPEEQASPDHIEI 1453

Query: 183  DENLSFVTRPVRVL 224
             E+L++V +P+R+L
Sbjct: 1454 QEDLTYVEKPIRIL 1467


>gb|AAV35799.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108709586|gb|ABF97381.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1238

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/74 (58%), Positives = 60/74 (81%)
 Frame = +3

Query: 3    GKLAPRFIGPYRILEKVGELAYRLELPERMRMIHNVFHVSMLRRCLKRDEDVVTPTEIDL 182
            GKLAPRF+GPYR+LE+ GE+AY+LELP  M  IHNVFHVS L++CLK  E+  +P +I++
Sbjct: 1123 GKLAPRFVGPYRVLERRGEVAYQLELPSSMLGIHNVFHVSQLKKCLKVPEEQASPDQIEI 1182

Query: 183  DENLSFVTRPVRVL 224
             E+L++V +P R+L
Sbjct: 1183 QEDLTYVEKPTRIL 1196


>gb|AAR06317.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1233

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/74 (58%), Positives = 60/74 (81%)
 Frame = +3

Query: 3    GKLAPRFIGPYRILEKVGELAYRLELPERMRMIHNVFHVSMLRRCLKRDEDVVTPTEIDL 182
            GKLAPRF+GPYR+LE+ GE+AY+LELP  M  IHNVFHVS L++CLK  E+  +P +I++
Sbjct: 1118 GKLAPRFVGPYRVLERRGEVAYQLELPSSMLGIHNVFHVSQLKKCLKVPEEQASPDQIEI 1177

Query: 183  DENLSFVTRPVRVL 224
             E+L++V +P R+L
Sbjct: 1178 QEDLTYVEKPTRIL 1191


>gb|AAV59390.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|57900672|gb|AAW57797.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1253

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/74 (58%), Positives = 60/74 (81%)
 Frame = +3

Query: 3    GKLAPRFIGPYRILEKVGELAYRLELPERMRMIHNVFHVSMLRRCLKRDEDVVTPTEIDL 182
            GKLAPRF+GPYRILE+ GE+AY+LELP  M  IHNVFHVS L++CL+  E+  +P +I++
Sbjct: 1125 GKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHNVFHVSQLKKCLRVPEEQASPDQIEI 1184

Query: 183  DENLSFVTRPVRVL 224
             E+L++V +P R+L
Sbjct: 1185 QEDLTYVEKPTRIL 1198