BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006715
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   126   2e-27
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...   124   6e-27
gb|ABA98207.1| retrotransposon protein, putative, Ty3-gypsy subc...   123   1e-26
gb|ABA97778.2| retrotransposon protein, putative, Ty3-gypsy subc...   123   1e-26
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc...   123   1e-26

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/107 (54%), Positives = 81/107 (75%)
 Frame = +1

Query: 1    DKGRRPKDFSVDELVFLKVSPMRGLMRFGQKGKLAPRFIGPYRILEKVGELAYRLELPER 180
            D+ RR ++F V E V LKVSPM+G+MRFG+KGKL+P+FIGPY IL +VG++AYRL+LP  
Sbjct: 1374 DQKRRDENFEVGEKVLLKVSPMKGVMRFGKKGKLSPKFIGPYEILARVGKVAYRLDLPND 1433

Query: 181  MRMIHNVFHVSMLRRCLKRDEDVVTPTEIDLDENLSFVTRPVKVLAR 321
            +  +HNVFHVS LRR +     V+ P  +++DE LS+  +PV++L R
Sbjct: 1434 LERVHNVFHVSQLRRYVPDASHVLEPENVEIDETLSYEEKPVQILDR 1480


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/110 (51%), Positives = 81/110 (73%)
 Frame = +1

Query: 1    DKGRRPKDFSVDELVFLKVSPMRGLMRFGQKGKLAPRFIGPYRILEKVGELAYRLELPER 180
            D  RRP +F+V + V+L+ SPM+G+ RFGQKGKL+PR++GP+ I+E++G+LAYRL LPE 
Sbjct: 991  DIRRRPLEFAVGDRVYLRASPMKGVKRFGQKGKLSPRYVGPFDIIERIGKLAYRLRLPES 1050

Query: 181  MRMIHNVFHVSMLRRCLKRDEDVVTPTEIDLDENLSFVTRPVKVLARDSK 330
            M  +HNVFHVSML++CL   +         L +NLS++ +PVK+L R  K
Sbjct: 1051 MSRVHNVFHVSMLKKCLSSTDVESQFNPEMLQDNLSYIEKPVKILDRKEK 1100


>gb|ABA98207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1562

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/105 (53%), Positives = 80/105 (76%)
 Frame = +1

Query: 1    DKGRRPKDFSVDELVFLKVSPMRGLMRFGQKGKLAPRFIGPYRILEKVGELAYRLELPER 180
            D  RR   F V + V+L+V+P+RG+ RF  KGKLAPRF+GPYRILE+ GE+AY+LELP  
Sbjct: 1403 DNRRRELVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSN 1462

Query: 181  MRMIHNVFHVSMLRRCLKRDEDVVTPTEIDLDENLSFVTRPVKVL 315
            M  IHNVFHVS L++CL+  E+  +P +I++ E+L++V +P ++L
Sbjct: 1463 MLGIHNVFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRIL 1507


>gb|ABA97778.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1557

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/105 (53%), Positives = 80/105 (76%)
 Frame = +1

Query: 1    DKGRRPKDFSVDELVFLKVSPMRGLMRFGQKGKLAPRFIGPYRILEKVGELAYRLELPER 180
            D  RR   F V + V+L+V+P+RG+ RF  KGKLAPRF+GPYRILE+ GE+AY+LELP  
Sbjct: 1398 DNRRRELVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSN 1457

Query: 181  MRMIHNVFHVSMLRRCLKRDEDVVTPTEIDLDENLSFVTRPVKVL 315
            M  IHNVFHVS L++CL+  E+  +P +I++ E+L++V +P ++L
Sbjct: 1458 MLGIHNVFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRIL 1502


>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1548

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/105 (53%), Positives = 80/105 (76%)
 Frame = +1

Query: 1    DKGRRPKDFSVDELVFLKVSPMRGLMRFGQKGKLAPRFIGPYRILEKVGELAYRLELPER 180
            D  RR   F V + V+L+V+P+RG+ RF  KGKLAPRF+GPYRILE+ GE+AY+LELP  
Sbjct: 1389 DNRRRELVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSN 1448

Query: 181  MRMIHNVFHVSMLRRCLKRDEDVVTPTEIDLDENLSFVTRPVKVL 315
            M  IHNVFHVS L++CL+  E+  +P +I++ E+L++V +P ++L
Sbjct: 1449 MLGIHNVFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRIL 1493