BLASTX nr result
ID: Cimicifuga21_contig00006701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006701
(1679 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2... 483 e-134
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,... 481 e-133
ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi... 477 e-132
emb|CBI25186.3| unnamed protein product [Vitis vinifera] 477 e-132
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi... 450 e-124
>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
predicted protein [Populus trichocarpa]
Length = 444
Score = 483 bits (1243), Expect = e-134
Identities = 227/409 (55%), Positives = 304/409 (74%)
Frame = +2
Query: 269 HFSSEAEAISFVYTSDVRLTEGLVCSLIWAFTHEWELALLALRWGQKRGCSNSRAWDLMI 448
H SEAEA++ + S +R + LV S+IW EW LA LA +WG K GC + +A +LM+
Sbjct: 4 HLPSEAEAMASLDESGIRANQNLVYSVIWELREEWRLAFLAFKWGDKWGCVDEKACELMV 63
Query: 449 WVLGQERRFGTAWRLIREMLRSSMDVRRGLLIMIDSYAVANCPRKSIQTFQAMEKLRIRQ 628
WVLG R+F TAW LIR++ RS M R+ +LIMID YA AN P K+I F+ M+K R+
Sbjct: 64 WVLGNHRKFNTAWILIRDLHRSLMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMTP 123
Query: 629 DPEALYTLLDVLCKNGNVEEAEEFMQLNKNVFPLQTESFNLILNGWCNVSLDLIEAKRVW 808
D EA Y LL+VLCKNGN+EEAEEFM +NK FPL+ E FN+ILNGWCN+ +D+ EAKR+W
Sbjct: 124 DEEAFYFLLNVLCKNGNIEEAEEFMLVNKKFFPLEVEGFNIILNGWCNICVDVFEAKRIW 183
Query: 809 REMANCCIAPDATSYTHMISCFSKVGNLFNSLRMYDEMKKRGWVPGLDVYNSLIYVLTRD 988
REM+ CI PDAT+YTHMISCFSKVGNLF+SLR+YD MKKRGWVPG++VYNSL+Y+LTR+
Sbjct: 184 REMSKYCIDPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRE 243
Query: 989 NCLKEALRLVDKIKEAGLQPHSSTYNSMMRPLCEVHKVEEAKRVLSGMVGEGICPTTETY 1168
NC KEAL+++DK+KE GLQ S+TYNSM+RPLCE K+E+A+ +++ M+ E + PT ETY
Sbjct: 244 NCFKEALKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMIEENVSPTIETY 303
Query: 1169 HAFVEVVESADGIVEMLKQMREAGCGPCGHTFSLIMSRLLLKSKQPGDALRMWAEMLKYE 1348
HAF++ + + E+L +M+ AG GP TF L++++ K +QP +AL++W EM +YE
Sbjct: 304 HAFLQGIVFEE-TFEVLDRMKIAGLGPTEDTFLLLLAK-FFKLEQPENALKIWVEMKQYE 361
Query: 1349 LVPDSAHYNVMVRGLVVCGWLAKARKFYDDMKLRGFPADDPTIDKLFKV 1495
+ + HY VMV GL CG L KAR++Y +M+ G+ +DDP I K+ KV
Sbjct: 362 VASNLTHYTVMVEGLARCGLLTKAREYYAEMRSNGY-SDDPKIQKMLKV 409
>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 552
Score = 481 bits (1238), Expect = e-133
Identities = 233/445 (52%), Positives = 321/445 (72%), Gaps = 4/445 (0%)
Frame = +2
Query: 170 SSSSKTQFFQPHQFES---NEAGCVDGVVEMLRKTKHFSSEAEAISFVYTSDVRLTEGLV 340
S SS+ Q + FE N G++E L++ +F EAEA++ + S V+ LV
Sbjct: 67 SFSSQNQKYPFELFEHRIYNHDPLTQGLLETLKRAAYFPGEAEAMACIDGSGVKANINLV 126
Query: 341 CSLIWAFTHEWELALLALRWGQKRGCSNSRAWDLMIWVLGQERRFGTAWRLIREMLRSSM 520
S+IW +W+LA L +WG+K GC + ++ +L++W+LG R+F AW +IR+M + SM
Sbjct: 127 YSVIWELRKDWKLAFLGFKWGEKWGCIDEKSCELIVWILGNHRKFNNAWIVIRDMHQLSM 186
Query: 521 DVRRGLLIMIDSYAVANCPRKSIQTFQAMEKLRIRQDPEALYTLLDVLCKNGNVEEAEEF 700
++++ +LIMID YA A+ P K+I+ F MEK ++ D EA Y+L++ LC +G +EEAEEF
Sbjct: 187 NIQQTMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPDEEAFYSLMNALCNHGYIEEAEEF 246
Query: 701 MQLNKNVFPLQTESFNLILNGWCNVSLDLIEAKRVWREMANCCIAPDATSYTHMISCFSK 880
M +NK +FPL+TE FN+ILNGWC++ ++L+EAKRVWREM+ CCI P+ATSYTHMISCFSK
Sbjct: 247 MVVNKKLFPLETEGFNVILNGWCSICVNLLEAKRVWREMSKCCITPNATSYTHMISCFSK 306
Query: 881 VGNLFNSLRMYDEMKKRGWVPGLDVYNSLIYVLTRDNCLKEALRLVDKIKEAGLQPHSST 1060
VGNLF+SLR+YDEMKKRGW+PG++VYNSLIYVLTR+NC KEALR +DK+KE GLQP S+T
Sbjct: 307 VGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALRFLDKMKEVGLQPDSTT 366
Query: 1061 YNSMMRPLCEVHKVEEAKRVLSGMVGEGICPTTETYHAFVEVVES-ADGIVEMLKQMREA 1237
YNSM+RPLCE K+ EA+ VL+ M+ E I PT ETYHA +EV S + +E+L +M A
Sbjct: 367 YNSMIRPLCEGKKLVEARSVLATMIEENISPTMETYHALLEVENSDFEATLEVLNRMTVA 426
Query: 1238 GCGPCGHTFSLIMSRLLLKSKQPGDALRMWAEMLKYELVPDSAHYNVMVRGLVVCGWLAK 1417
G P TF L++++ K +Q +AL+MW EM +YE+ P+ HY ++V GLV CG LAK
Sbjct: 427 GLAPTDDTFLLVLAK-FFKLEQAENALKMWIEMKQYEVTPNLTHYKILVEGLVRCGLLAK 485
Query: 1418 ARKFYDDMKLRGFPADDPTIDKLFK 1492
AR+ Y DM+ GF DDP + K+ K
Sbjct: 486 ARECYADMRSNGF-TDDPKLQKMLK 509
>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Vitis vinifera]
Length = 537
Score = 477 bits (1228), Expect = e-132
Identities = 236/429 (55%), Positives = 309/429 (72%), Gaps = 1/429 (0%)
Frame = +2
Query: 239 GVVEMLRKTKHFSSEAEAISFVYTSDVRLTEGLVCSLIWAFTHEWELALLALRWGQKRGC 418
G+ E+L++ + SSEAE ++ + S V + LV IW +W LA WG+K GC
Sbjct: 81 GLPELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGC 140
Query: 419 SNSRAWDLMIWVLGQERRFGTAWRLIREMLRSSMDVRRGLLIMIDSYAVANCPRKSIQTF 598
++ R L+IW+LG ++FG AW LIRE+ RSS+D RR +LIMID Y AN P K+I+TF
Sbjct: 141 NSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTF 200
Query: 599 QAMEKLRIRQDPEALYTLLDVLCKNGNVEEAEEFMQLNKNVFPLQTESFNLILNGWCNVS 778
MEK R+ D EA YTLL LCK+GNVE+AEE M NK +FPL+TE FN+ILNGW NVS
Sbjct: 201 HIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGWSNVS 260
Query: 779 LDLIEAKRVWREMANCCIAPDATSYTHMISCFSKVGNLFNSLRMYDEMKKRGWVPGLDVY 958
LD+ EAKR+WREM+ CCI P+AT+YT MISCFSK GNLF+SLR++D+MKKRGW+PGL+VY
Sbjct: 261 LDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPGLEVY 320
Query: 959 NSLIYVLTRDNCLKEALRLVDKIKEAGLQPHSSTYNSMMRPLCEVHKVEEAKRVLSGMVG 1138
NSLIYVLT +NCL EAL+++ KIKE GLQ S++YN M+RPLC+ K+EEA+ +L+ M+G
Sbjct: 321 NSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIG 380
Query: 1139 EGICPTTETYHAFVEVVESADGIVEMLKQMREAGCGPCGHTFSLIMSRLLLKSKQPGDAL 1318
E + PTTETYHAF+E S + E+LK +R AG GP G TF LI+ L K QP +AL
Sbjct: 381 ENLGPTTETYHAFLEGA-SYEETFEVLKNLRTAGFGPNGDTFLLILDN-LFKLDQPENAL 438
Query: 1319 RMWAEMLKYELVPDSAHYNVMVRGLVVCGWLAKARKFYDDMKLRGFPADDPTIDKLFK-V 1495
++W EM ++++VP S HY V++ GL GWL KAR+ Y +M+ +GF DDP + KL K
Sbjct: 439 KIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGF-LDDPKLKKLLKDP 497
Query: 1496 GGGPSSKRE 1522
G S +RE
Sbjct: 498 VEGDSGERE 506
>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 477 bits (1228), Expect = e-132
Identities = 236/429 (55%), Positives = 309/429 (72%), Gaps = 1/429 (0%)
Frame = +2
Query: 239 GVVEMLRKTKHFSSEAEAISFVYTSDVRLTEGLVCSLIWAFTHEWELALLALRWGQKRGC 418
G+ E+L++ + SSEAE ++ + S V + LV IW +W LA WG+K GC
Sbjct: 81 GLPELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGC 140
Query: 419 SNSRAWDLMIWVLGQERRFGTAWRLIREMLRSSMDVRRGLLIMIDSYAVANCPRKSIQTF 598
++ R L+IW+LG ++FG AW LIRE+ RSS+D RR +LIMID Y AN P K+I+TF
Sbjct: 141 NSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTF 200
Query: 599 QAMEKLRIRQDPEALYTLLDVLCKNGNVEEAEEFMQLNKNVFPLQTESFNLILNGWCNVS 778
MEK R+ D EA YTLL LCK+GNVE+AEE M NK +FPL+TE FN+ILNGW NVS
Sbjct: 201 HIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGWSNVS 260
Query: 779 LDLIEAKRVWREMANCCIAPDATSYTHMISCFSKVGNLFNSLRMYDEMKKRGWVPGLDVY 958
LD+ EAKR+WREM+ CCI P+AT+YT MISCFSK GNLF+SLR++D+MKKRGW+PGL+VY
Sbjct: 261 LDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPGLEVY 320
Query: 959 NSLIYVLTRDNCLKEALRLVDKIKEAGLQPHSSTYNSMMRPLCEVHKVEEAKRVLSGMVG 1138
NSLIYVLT +NCL EAL+++ KIKE GLQ S++YN M+RPLC+ K+EEA+ +L+ M+G
Sbjct: 321 NSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIG 380
Query: 1139 EGICPTTETYHAFVEVVESADGIVEMLKQMREAGCGPCGHTFSLIMSRLLLKSKQPGDAL 1318
E + PTTETYHAF+E S + E+LK +R AG GP G TF LI+ L K QP +AL
Sbjct: 381 ENLGPTTETYHAFLEGA-SYEETFEVLKNLRTAGFGPNGDTFLLILDN-LFKLDQPENAL 438
Query: 1319 RMWAEMLKYELVPDSAHYNVMVRGLVVCGWLAKARKFYDDMKLRGFPADDPTIDKLFK-V 1495
++W EM ++++VP S HY V++ GL GWL KAR+ Y +M+ +GF DDP + KL K
Sbjct: 439 KIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGF-LDDPKLKKLLKDP 497
Query: 1496 GGGPSSKRE 1522
G S +RE
Sbjct: 498 VEGDSGERE 506
>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 450 bits (1157), Expect = e-124
Identities = 220/421 (52%), Positives = 295/421 (70%)
Frame = +2
Query: 230 CVDGVVEMLRKTKHFSSEAEAISFVYTSDVRLTEGLVCSLIWAFTHEWELALLALRWGQK 409
C +E+ ++ SE EA++ + DV+ LV S IW +W+ +LLA +WG+K
Sbjct: 82 CNARFIELFKRVALLPSEVEAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEK 141
Query: 410 RGCSNSRAWDLMIWVLGQERRFGTAWRLIREMLRSSMDVRRGLLIMIDSYAVANCPRKSI 589
G + +LMIWVLG ++F TAW LIRE+ S ++ + +L+MID YA AN K+I
Sbjct: 142 VGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAI 201
Query: 590 QTFQAMEKLRIRQDPEALYTLLDVLCKNGNVEEAEEFMQLNKNVFPLQTESFNLILNGWC 769
+TF MEK R+ D EA + LL+ LCK GN+EEAEEFM +NK +FPL TESFN+ILNGWC
Sbjct: 202 KTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWC 261
Query: 770 NVSLDLIEAKRVWREMANCCIAPDATSYTHMISCFSKVGNLFNSLRMYDEMKKRGWVPGL 949
NV++D+ EAKR+WREM+ CCI PD+TSYTHMISCFSK GNLF+SLR YD+MKKR W+P +
Sbjct: 262 NVTVDVFEAKRIWREMSKCCILPDSTSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSV 321
Query: 950 DVYNSLIYVLTRDNCLKEALRLVDKIKEAGLQPHSSTYNSMMRPLCEVHKVEEAKRVLSG 1129
+VYNSL YVLTR+NC EAL++++KIKE GL+P S+TYNS++ PLCE K++EAK VL+
Sbjct: 322 EVYNSLAYVLTRENCFNEALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTM 381
Query: 1130 MVGEGICPTTETYHAFVEVVESADGIVEMLKQMREAGCGPCGHTFSLIMSRLLLKSKQPG 1309
M + I PT ETYH+F++ +S E+LK+MR+ G GP TF LIM + ++P
Sbjct: 382 MTEDNISPTIETYHSFIQAADSKMSF-ELLKRMRQDGLGPTEGTF-LIMFNKSFELEEPE 439
Query: 1310 DALRMWAEMLKYELVPDSAHYNVMVRGLVVCGWLAKARKFYDDMKLRGFPADDPTIDKLF 1489
AL +W EM +YE+ P HY+V+++GL CG L KAR+ YD+M L GF A P I L
Sbjct: 440 YALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELYDEMILHGFIA-HPKIKTLL 498
Query: 1490 K 1492
K
Sbjct: 499 K 499