BLASTX nr result
ID: Cimicifuga21_contig00006695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006695
(2338 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 402 e-109
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 265 5e-68
ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828... 231 7e-58
gb|ACF22720.1| PHD finger family [Brachypodium distachyon] 230 1e-57
ref|NP_001057395.1| Os06g0283200 [Oryza sativa Japonica Group] g... 229 3e-57
>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
gi|297734114|emb|CBI15361.3| unnamed protein product
[Vitis vinifera]
Length = 648
Score = 402 bits (1034), Expect = e-109
Identities = 267/702 (38%), Positives = 347/702 (49%), Gaps = 32/702 (4%)
Frame = -1
Query: 2212 DIEAVDTEEEDESVYSDSKVCGICFSEEGKVIRGWIDSCNHYFCFVCIMEWSKVESRCPL 2033
DI A + E+V DS CGIC E+ + IRGW+DSC+HYFCFVCIMEW+KVESRCP+
Sbjct: 33 DISANQCPKAKEAVDFDSNCCGICLLEDDRAIRGWVDSCDHYFCFVCIMEWAKVESRCPM 92
Query: 2032 CKQRFKTIIREPKDGVFQQERIINVPARKQVWHPLGNQSELETEISDPYAEVNCSECQST 1853
CK+RF TI R PK GVF ERI+NVP R Q +H GN + T SDPYAEV+C C T
Sbjct: 93 CKRRFSTIRRPPKPGVFPSERIVNVPVRDQAYHHFGN---VTTGPSDPYAEVDCGICHGT 149
Query: 1852 LDEHXXXXXXXXDSAAHTYCLGLGDTVPEGDWYCHDCNISRNEHSDSEIDT---DNQDSR 1682
DE DSAAHTYC+GLG TVPEGDW+CHDC +SR EH++ EID D + R
Sbjct: 150 ADESFLLICDLCDSAAHTYCVGLGHTVPEGDWFCHDCTVSRAEHANGEIDAVFDDRNNFR 209
Query: 1681 SPITTPVAATNILDSEIVQEPDSQNVNRSTGRTSCRNEDSNTETNTEYRDSRNSIRTPVA 1502
+ P A T++ +IV EP ++ ED + +R S
Sbjct: 210 NFYRKPSAETHVSICDIVAEPYTR-------------EDERPPSIGSSHPNRPS------ 250
Query: 1501 ATYASISEIVQESRSWNVNRSKRRRSLSHVPGRVVHSKTTVSDSSARTLRKCRSVHSRIQ 1322
S I S ++ VN S S S ARTL +CR+V++ IQ
Sbjct: 251 ------SPIALNSENFAVNNSS-------------------SMSVARTLLRCRNVNAHIQ 285
Query: 1321 ILRQSWNALRKGSLAFSTNLPNSGGKNVKKHNREVIYDKSSKPQSSSYATPEPKSTMDNG 1142
LR++WNALR GS+ FS+ L +SGG++ +K+N +
Sbjct: 286 ALRENWNALRSGSMTFSSILGDSGGESSQKYN------------------------VGAS 321
Query: 1141 CGDRMNSKSPYDIDRAWKMLDIAKSVQSAREGTRSSHQASSYHPGKRDVPKE-------- 986
C + N+ YD ++AWKM+D AKS+Q A E T HQ S + GK +VPKE
Sbjct: 322 CPKQDNNACSYDTEKAWKMMDKAKSIQRACERTGIIHQVSKHPLGKVNVPKEVANVKSSS 381
Query: 985 AKNXXXXXXXXXXXTFQLN----DMGRVPPEKKYRHESAVVAKAKNIAQMSEERRLIKDS 818
A N F+ + D R P+K E V + I + +E I
Sbjct: 382 ATNNRQLGNKDFGWHFKHHSLETDNKRYKPQKSENQEQGRVTRT-GIPKFTESSLTIHSL 440
Query: 817 LGIXXXXXXXXXXXXXSCDLPLVKKLHILDHVDLCH--------QNSCDENRASSNTNGR 662
+ D P +K VD+ H +N D A + +G
Sbjct: 441 VSF---------------DSPSSRKAETSFQVDVHHRTGVRPSQKNLVDSFNAINERDGY 485
Query: 661 SA---------NNWSMSHTELSSKASDLFYNRPDLXXXXXXXXXXXXXXXXXXSYAKIMV 509
+ + +SH L AS L + DL AK
Sbjct: 486 GSLIIPDGPVPRSPDLSHANLKFGASSLC--KEDLLHRPKGRVEIGS--------AKNKA 535
Query: 508 RKDEGAKCEVQSLVXXXXXXXXXXXXLGVNGFKEVARLATHSILAACGLEHKESNVRPFP 329
R+D+ AK E+QSLV LGV+ FKEVARLATH+ILAACGLEH +S VR FP
Sbjct: 536 RRDDDAKSEIQSLVKLNLKLISKDKQLGVDTFKEVARLATHTILAACGLEHSKSCVRSFP 595
Query: 328 ALICKHNDQTKQLHMSNLMPTSCRECFYAFVKDVVSSIMAEE 203
+C H++Q +QLH S LMP SCRECFYA+VKDVV+ I E+
Sbjct: 596 TSMCTHSEQVQQLHKSTLMPRSCRECFYAYVKDVVNFITVEK 637
>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
splicing factor, arginine/serine-rich 2,rnap interacting
protein, putative [Ricinus communis]
Length = 632
Score = 265 bits (676), Expect = 5e-68
Identities = 152/383 (39%), Positives = 211/383 (55%), Gaps = 2/383 (0%)
Frame = -1
Query: 2164 DSKVCGICFSEEGKVIRGWIDSCNHYFCFVCIMEWSKVESRCPLCKQRFKTIIREPKDGV 1985
+S +CGIC SE +RG IDSC+HYFCF+CIMEW+K+ESRCP+CK+RF I R PKDGV
Sbjct: 44 ESLICGICLSENWSAMRGQIDSCDHYFCFICIMEWAKIESRCPMCKRRFNNIHRPPKDGV 103
Query: 1984 FQQERIINVPARKQVWHPLGNQSELETEISDPYAEVNCSECQSTLDEHXXXXXXXXDSAA 1805
F ER++NVP R QV+H GN + E DPYA+V CS C + DE DSAA
Sbjct: 104 FPSERLVNVPKRDQVYHLFGNTT---VEPFDPYAQVQCSICHTAEDESLLLLCDLCDSAA 160
Query: 1804 HTYCLGLGDTVPEGDWYCHDCNISRNEHSDSEIDTDNQDSRSPITTPVAATNILDSEIVQ 1625
HTYC+GLG TVPE DW+CHDC +SR EH + + D DN T V + +L +E
Sbjct: 161 HTYCVGLGFTVPECDWFCHDCAVSRTEHENFQKDEDNITQ----TLSVKSEVVLAAEPYV 216
Query: 1624 EPDSQNVNRSTGRTSCRNEDSNTETNTEYRDSRN-SIRTPVAATYASISEIVQESRSWNV 1448
+SQN + N ++ E + S N SI P A + S + S +
Sbjct: 217 AVNSQNTS--------ENYNAGAENGANFCQSDNQSIGRPRARSSQVPSPSERLSNLADD 268
Query: 1447 NRSKRRRSLSHVPGRVVHSKTTVSDSSARTLRKCRSVHSRIQILRQSWNALRKGSLAFST 1268
R + PG+ S ARTLR+CR VHS ++ LR++W+ALR GSL FS+
Sbjct: 269 MSQPRETTTRTGPGQ------ETPQSDARTLRRCRDVHSYVRALRENWDALRSGSLRFSS 322
Query: 1267 NLPNSGGKNVKKHNREVIYDKSSKPQSSSYATPEPKSTMDNGC-GDRMNSKSPYDIDRAW 1091
+ S +++ K V+ +SS + +T + T+++G G + +D +AW
Sbjct: 323 SSVESCSRSIAKCYTPVVTHESSGQSHTMSSTSGQQLTINDGLPGTFAQDRHSHDAKKAW 382
Query: 1090 KMLDIAKSVQSAREGTRSSHQAS 1022
KM+ AKS+ + + AS
Sbjct: 383 KMMAKAKSIHQGSKNPSTKGNAS 405
>ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828773 [Brachypodium
distachyon]
Length = 726
Score = 231 bits (589), Expect = 7e-58
Identities = 143/420 (34%), Positives = 212/420 (50%), Gaps = 15/420 (3%)
Frame = -1
Query: 2248 PLSPSKGKEKIEDIEAVDTEEEDESVYSDSKVCGICFSEEGKVIRGWIDSCNHYFCFVCI 2069
P + SKGK ++D DE+ ++ +CGIC ++ + IRG +D C H+FCFVCI
Sbjct: 12 PSTTSKGKAMMDD---------DEAEAAEGVLCGICLTDSRRAIRGELDCCAHHFCFVCI 62
Query: 2068 MEWSKVESRCPLCKQRFKTIIREPKDGVFQQERIINVPARKQVWHPLGNQSELETEISDP 1889
M W++VESRCP CK RF+TI R P G F ER++ V R QV+HP GN+S L +DP
Sbjct: 63 MAWARVESRCPFCKARFRTIRRPPVPGRFPSERLVTVAERNQVYHPRGNESSLVN--TDP 120
Query: 1888 YAEVNCSECQSTLDEHXXXXXXXXDSAAHTYCLGLGDTVPEGDWYCHDCNISRNEHSDSE 1709
Y +CS C + DE D+AAHTYC+GLG TVPEGDW+C DC S+ EHS E
Sbjct: 121 YVNSSCSMCNCSRDEELLLLCELCDAAAHTYCVGLGTTVPEGDWFCKDCATSKEEHSRCE 180
Query: 1708 IDTDNQDSRSPITTPVAATNILDSEIVQEPD-SQNVNRSTGRTSCRNEDSNTETNTEYRD 1532
ID + T + +E V +P V+ + +S R ++++ + D
Sbjct: 181 IDDAGSSDQGEFE---ITTEVPSAEPVADPTIFYTVDEAYSLSSVRRANASSSGHF-LVD 236
Query: 1531 SRNSIRTPVAATYASISEIVQESRSWNVNR--------SKRRRSLSH------VPGRVVH 1394
S SI V YA+ RS ++R + S H GR H
Sbjct: 237 SVPSIYDIVDEDYATNRVCRSNVRSTRLDRKADDFRPSTSSDESYCHETPQERTSGRTFH 296
Query: 1393 SKTTVSDSSARTLRKCRSVHSRIQILRQSWNALRKGSLAFSTNLPNSGGKNVKKHNREVI 1214
S ARTL R++ +RI LR++W ALR GS+ F+T+L N+ + ++ I
Sbjct: 297 SLARFRVEKARTLPNSRNLSNRIMALRENWPALRAGSVGFATHLHNNSATSSVNEHQHSI 356
Query: 1213 YDKSSKPQSSSYATPEPKSTMDNGCGDRMNSKSPYDIDRAWKMLDIAKSVQSAREGTRSS 1034
+ ++ + ++ +P+ S + +AWKML++AKS ++ + S
Sbjct: 357 GETTTMSEHANKISPKETS----------------HVRKAWKMLEMAKSAGERKKCNKPS 400
Score = 73.2 bits (178), Expect = 3e-10
Identities = 39/95 (41%), Positives = 54/95 (56%)
Frame = -1
Query: 493 AKCEVQSLVXXXXXXXXXXXXLGVNGFKEVARLATHSILAACGLEHKESNVRPFPALICK 314
AK E+ S+ G + FKEVAR ATH++LA+CGLEH S P CK
Sbjct: 622 AKAEISSMAMRELKLLKIDKTHGSDRFKEVARAATHTVLASCGLEHSPSLALALPKPACK 681
Query: 313 HNDQTKQLHMSNLMPTSCRECFYAFVKDVVSSIMA 209
+ +T+ L +S + T CREC FVK V+SS+++
Sbjct: 682 DSCRTEPLKLSAITNT-CRECLCDFVKQVISSVLS 715
>gb|ACF22720.1| PHD finger family [Brachypodium distachyon]
Length = 748
Score = 230 bits (587), Expect = 1e-57
Identities = 144/426 (33%), Positives = 214/426 (50%), Gaps = 21/426 (4%)
Frame = -1
Query: 2248 PLSPSKGKEKIEDIEAVDTEEEDESVYSDSKVCGICFSEEGKVIRGWIDSCNHYFCFVCI 2069
P + SKGK ++D DE+ ++ +CGIC ++ + IRG +D C H+FCFVCI
Sbjct: 12 PSTTSKGKAMMDD---------DEAEAAEGVLCGICLTDSRRAIRGELDCCAHHFCFVCI 62
Query: 2068 MEWSKVESRCPLCKQRFKTIIREPKDGVFQQERIINVPARKQVWHPLGNQSELETEISDP 1889
M W++VESRCP CK RF+TI R P G F ER++ V R QV+HP GN+S L +DP
Sbjct: 63 MAWARVESRCPFCKARFRTIRRPPVPGRFPSERLVTVAERNQVYHPRGNESSLVN--TDP 120
Query: 1888 YAEVNCSECQSTLDEHXXXXXXXXDSAAHTYCLGLGDTVPEGDWYCHDCNISRNEHSDSE 1709
Y +CS C + DE D+AAHTYC+GLG TVPEGDW+C DC S+ EHS E
Sbjct: 121 YVNSSCSMCNCSRDEELLLLCELCDAAAHTYCVGLGTTVPEGDWFCKDCATSKEEHSRCE 180
Query: 1708 IDTDNQDSRSPITTPVAATNILDSEIVQEPD-SQNVNRSTGRTSCRNEDSNTETNTEYRD 1532
ID + T + +E V +P V+ + +S R ++++ + D
Sbjct: 181 IDDAGSSDQGEFE---ITTEVPSAEPVADPTIFYTVDEAYSLSSVRRANASSSGHF-LVD 236
Query: 1531 SRNSIRTPVAATYASISEIVQESRSWNVNR--------SKRRRSLSH------VPGRVVH 1394
S SI V YA+ RS ++R + S H GR H
Sbjct: 237 SVPSIYDIVDEDYATNRVCRSNVRSTRLDRKADDFRPSTSSDESYCHETPQERTSGRTFH 296
Query: 1393 SKTTVSDSSARTLRKCRSVHSRIQILRQSWNALRKGSLAFSTNLPNSGGKN------VKK 1232
S ARTL R++ +RI LR++W ALR GS+ F+T+L N+ +N
Sbjct: 297 SLARFRVEKARTLPNSRNLSNRIMALRENWPALRAGSVGFATHLHNNRRENGTGTISAVS 356
Query: 1231 HNREVIYDKSSKPQSSSYATPEPKSTMDNGCGDRMNSKSPYDIDRAWKMLDIAKSVQSAR 1052
N+ + + + ++T + ++++ K + +AWKML++AKS +
Sbjct: 357 DNKRCATSMVATSSVNEHQHSIGETTTMSEHANKISPKETSHVRKAWKMLEMAKSAGERK 416
Query: 1051 EGTRSS 1034
+ + S
Sbjct: 417 KCNKPS 422
Score = 73.2 bits (178), Expect = 3e-10
Identities = 39/95 (41%), Positives = 54/95 (56%)
Frame = -1
Query: 493 AKCEVQSLVXXXXXXXXXXXXLGVNGFKEVARLATHSILAACGLEHKESNVRPFPALICK 314
AK E+ S+ G + FKEVAR ATH++LA+CGLEH S P CK
Sbjct: 644 AKAEISSMAMRELKLLKIDKTHGSDRFKEVARAATHTVLASCGLEHSPSLALALPKPACK 703
Query: 313 HNDQTKQLHMSNLMPTSCRECFYAFVKDVVSSIMA 209
+ +T+ L +S + T CREC FVK V+SS+++
Sbjct: 704 DSCRTEPLKLSAITNT-CRECLCDFVKQVISSVLS 737
>ref|NP_001057395.1| Os06g0283200 [Oryza sativa Japonica Group]
gi|55297405|dbj|BAD69258.1| 2x PHD domain containing
protein-like [Oryza sativa Japonica Group]
gi|113595435|dbj|BAF19309.1| Os06g0283200 [Oryza sativa
Japonica Group] gi|215707203|dbj|BAG93663.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 763
Score = 229 bits (583), Expect = 3e-57
Identities = 148/410 (36%), Positives = 209/410 (50%), Gaps = 31/410 (7%)
Frame = -1
Query: 2203 AVDTEEEDESVYSDSKVCGICFSEEGKVIRGWIDSCNHYFCFVCIMEWSKVESRCPLCKQ 2024
A EEE+E V CGIC ++ + +RG +D C H+FCFVCIM W++VESRCP CK
Sbjct: 15 AAREEEEEEGVS-----CGICLTDARRAVRGELDCCAHHFCFVCIMAWARVESRCPFCKA 69
Query: 2023 RFKTIIREPKDGVFQQERIINVPARKQVWHPLGNQSELETEISDPYAEVNCSECQSTLDE 1844
RF+TI R P G F +R++ VP R Q +P GN S T +D YA +CS C + D+
Sbjct: 70 RFRTITRPPVPGRFPSQRVVAVPERNQACNPSGNGS--STVDADLYANTSCSVCNLSNDD 127
Query: 1843 HXXXXXXXXDSAAHTYCLGLGDTVPEGDWYCHDCNISRNEHSDSEIDTDNQDSRS----- 1679
DSA HTYC GLG +PEGDW+C DC ++ EHS EID DN
Sbjct: 128 ELLMLCELCDSAVHTYCAGLGTEIPEGDWFCTDCMTAKEEHSRCEIDDDNSSDHGEFKIT 187
Query: 1678 ---PITTPVAATNILDSEIVQEPDSQN-VNRSTGRTSCRNEDSNTETNTEYRDSRNSIRT 1511
PI PVAA +I S+IV E S N V RS+ + +R SI
Sbjct: 188 IEVPIADPVAAPSI--SDIVDEGHSPNLVQRSS-----------------VQSNRPSISD 228
Query: 1510 PVAATYASISEIVQESRSWNVN-RSKRRRS-LSHVPGRVV-------------------- 1397
PV + Y + + VN RS R S +P + +
Sbjct: 229 PVPSIYDIVDDDYTTIPIGRVNARSTRLDSRAERLPSQGISVGPQCPESPQERENSRVCS 288
Query: 1396 HSKTTVSDSSARTLRKCRSVHSRIQILRQSWNALRKGSLAFSTNLPNSGGKNVKKHNREV 1217
H+++ + ARTLR R++ SRI+ LR++W+ALR GS+ F+T L N ++ N
Sbjct: 289 HARSRIESERARTLRNSRNLGSRIRELRENWSALRSGSIGFATQLHNR-----RRGNGAG 343
Query: 1216 IYDKSSKPQSSSYATPEPKSTMDNGCGDRMNSKSPYDIDRAWKMLDIAKS 1067
D + +S++ T + +G +++ K+ D+ +AWKML++AKS
Sbjct: 344 TCDIEERHRSTT--TFMEVAASSSGHAKKISPKNSSDVHKAWKMLEMAKS 391
Score = 74.7 bits (182), Expect = 1e-10
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = -1
Query: 427 GVNGFKEVARLATHSILAACGLEHKESNVRPFPALICKHNDQTKQLHMSNLMPTSCRECF 248
G + FKEVAR ATH++LA+CGLEH S P +CKH +T+ L +++ CREC
Sbjct: 686 GSDTFKEVARAATHTVLASCGLEHSPSVALALPRPVCKHTCKTEPLPSPDVLTDFCRECL 745
Query: 247 YAFVKDVVSSIMA 209
FVK+V+SS+++
Sbjct: 746 CNFVKEVISSLLS 758