BLASTX nr result

ID: Cimicifuga21_contig00006690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006690
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27999.3| unnamed protein product [Vitis vinifera]              124   2e-26
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...   124   2e-26
gb|ABA81866.1| unknown [Solanum tuberosum]                            122   1e-25
ref|XP_004157888.1| PREDICTED: mitochondrial import inner membra...   119   8e-25
ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   119   8e-25

>emb|CBI27999.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  124 bits (312), Expect = 2e-26
 Identities = 67/145 (46%), Positives = 89/145 (61%)
 Frame = +3

Query: 90  TSDLARLTYPDRIVDNVGEGFSFGLVFGTAFYFVKGICNAPKGGRVSGGLQAVKMKVPSL 269
           T + +R   PDRI+D+VG  F  G V G+AF+F+KGI N+PKG RV GG QAV+M  P +
Sbjct: 3   TPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRV 62

Query: 270 CCFFAAWYGLSSGXXXXXXXXXXXIHYTMVGVRQKEDPWNCFISGGVAGGVLRMRQGLVC 449
              FA W GL S               TMV VRQKEDPWN  I+G   GG L+MRQGL  
Sbjct: 63  GGSFAVWGGLFSA-----------FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAA 111

Query: 450 SSTTAVKGGLVYVSVEGLRIVIGRL 524
           S+ +A+ GG++   +EG  I++ ++
Sbjct: 112 STRSAIFGGVLLGLIEGAGIMLNKV 136


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score =  124 bits (312), Expect = 2e-26
 Identities = 67/145 (46%), Positives = 89/145 (61%)
 Frame = +3

Query: 90  TSDLARLTYPDRIVDNVGEGFSFGLVFGTAFYFVKGICNAPKGGRVSGGLQAVKMKVPSL 269
           T + +R   PDRI+D+VG  F  G V G+AF+F+KGI N+PKG RV GG QAV+M  P +
Sbjct: 3   TPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRV 62

Query: 270 CCFFAAWYGLSSGXXXXXXXXXXXIHYTMVGVRQKEDPWNCFISGGVAGGVLRMRQGLVC 449
              FA W GL S               TMV VRQKEDPWN  I+G   GG L+MRQGL  
Sbjct: 63  GGSFAVWGGLFSA-----------FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAA 111

Query: 450 SSTTAVKGGLVYVSVEGLRIVIGRL 524
           S+ +A+ GG++   +EG  I++ ++
Sbjct: 112 STRSAIFGGVLLGLIEGAGIMLNKV 136


>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score =  122 bits (305), Expect = 1e-25
 Identities = 65/145 (44%), Positives = 89/145 (61%)
 Frame = +3

Query: 90  TSDLARLTYPDRIVDNVGEGFSFGLVFGTAFYFVKGICNAPKGGRVSGGLQAVKMKVPSL 269
           T + +R   PDRI+D+VG  F  G V G+AF+F+KGI N+PKG R+ GG QAV+M  P +
Sbjct: 3   TPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAPRI 62

Query: 270 CCFFAAWYGLSSGXXXXXXXXXXXIHYTMVGVRQKEDPWNCFISGGVAGGVLRMRQGLVC 449
              FA W GL S               TMV +RQKEDPWN  I+G   GG L+MRQGL  
Sbjct: 63  GGSFAVWGGLFS-----------TFDCTMVYLRQKEDPWNSIIAGAATGGFLQMRQGLGA 111

Query: 450 SSTTAVKGGLVYVSVEGLRIVIGRL 524
           +S +A+ GG++   +EG  I++ ++
Sbjct: 112 ASRSAMFGGVLLALIEGAGIMLNKV 136


>ref|XP_004157888.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 237

 Score =  119 bits (298), Expect = 8e-25
 Identities = 61/145 (42%), Positives = 88/145 (60%)
 Frame = +3

Query: 90  TSDLARLTYPDRIVDNVGEGFSFGLVFGTAFYFVKGICNAPKGGRVSGGLQAVKMKVPSL 269
           T + +R   PDRI+D++G  F  G V G+AF+F+KG+ N+P+G R+ GG QAV+M  P +
Sbjct: 3   TPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAPRV 62

Query: 270 CCFFAAWYGLSSGXXXXXXXXXXXIHYTMVGVRQKEDPWNCFISGGVAGGVLRMRQGLVC 449
              FA W GL S               TMV VRQKEDPWN  I+G   GG L+MRQG   
Sbjct: 63  GGSFAVWGGLFSA-----------FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPAS 111

Query: 450 SSTTAVKGGLVYVSVEGLRIVIGRL 524
           ++ +A+ GG++   +EG  I++ ++
Sbjct: 112 AARSALFGGVLLALIEGAGIMLNKV 136


>ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane
           translocase subunit Tim17-like [Cucumis sativus]
          Length = 211

 Score =  119 bits (298), Expect = 8e-25
 Identities = 61/145 (42%), Positives = 88/145 (60%)
 Frame = +3

Query: 90  TSDLARLTYPDRIVDNVGEGFSFGLVFGTAFYFVKGICNAPKGGRVSGGLQAVKMKVPSL 269
           T + +R   PDRI+D++G  F  G V G+AF+F+KG+ N+P+G R+ GG QAV+M  P +
Sbjct: 3   TPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAPRV 62

Query: 270 CCFFAAWYGLSSGXXXXXXXXXXXIHYTMVGVRQKEDPWNCFISGGVAGGVLRMRQGLVC 449
              FA W GL S               TMV VRQKEDPWN  I+G   GG L+MRQG   
Sbjct: 63  GGSFAVWGGLFSA-----------FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPAS 111

Query: 450 SSTTAVKGGLVYVSVEGLRIVIGRL 524
           ++ +A+ GG++   +EG  I++ ++
Sbjct: 112 AARSALFGGVLLALIEGAGIMLNKV 136


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