BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006658
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAM58984.1| beta tubulin 6 [Hordeum vulgare subsp. vulgare]       372   e-100
ref|XP_003568451.1| PREDICTED: tubulin beta-1 chain-like [Brachy...   370   e-100
sp|Q9ZRB2.1|TBB1_WHEAT RecName: Full=Tubulin beta-1 chain; AltNa...   370   e-100
ref|NP_001105426.1| tubulin beta-2 chain [Zea mays] gi|135460|sp...   369   e-99 
ref|XP_003567397.1| PREDICTED: tubulin beta-4 chain-like [Brachy...   368   1e-99

>emb|CAM58984.1| beta tubulin 6 [Hordeum vulgare subsp. vulgare]
          Length = 445

 Score =  372 bits (954), Expect = e-100
 Identities = 198/273 (72%), Positives = 199/273 (72%)
 Frame = +3

Query: 3   YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSXXXXXXXXXXXXXXXXXXX 182
           YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS                   
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLH--- 264

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSK 362
                                      FFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSK
Sbjct: 265 ---------------------------FFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSK 297

Query: 363 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 542
           NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 543 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNXXX 722
           PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE       
Sbjct: 358 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE------- 410

Query: 723 XXXXXXXXXXXXXXXXXXXXXAESNMNDLVSEY 821
                                AESNMNDLVSEY
Sbjct: 411 ---------------------AESNMNDLVSEY 422


>ref|XP_003568451.1| PREDICTED: tubulin beta-1 chain-like [Brachypodium distachyon]
          Length = 444

 Score =  370 bits (950), Expect = e-100
 Identities = 197/273 (72%), Positives = 198/273 (72%)
 Frame = +3

Query: 3   YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSXXXXXXXXXXXXXXXXXXX 182
           YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS                   
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLH--- 264

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSK 362
                                      FFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSK
Sbjct: 265 ---------------------------FFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSK 297

Query: 363 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 542
           NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 543 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNXXX 722
           PRGLSM STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE       
Sbjct: 358 PRGLSMGSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE------- 410

Query: 723 XXXXXXXXXXXXXXXXXXXXXAESNMNDLVSEY 821
                                AESNMNDLVSEY
Sbjct: 411 ---------------------AESNMNDLVSEY 422


>sp|Q9ZRB2.1|TBB1_WHEAT RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|4098319|gb|AAD10487.1| beta-tubulin 1 [Triticum
           aestivum]
          Length = 445

 Score =  370 bits (949), Expect = e-100
 Identities = 197/273 (72%), Positives = 198/273 (72%)
 Frame = +3

Query: 3   YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSXXXXXXXXXXXXXXXXXXX 182
           YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS                   
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLH--- 264

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSK 362
                                      FFMVGFAPLTSRGSQ+YR LTVPELTQQMWDSK
Sbjct: 265 ---------------------------FFMVGFAPLTSRGSQMYRPLTVPELTQQMWDSK 297

Query: 363 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 542
           NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 543 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNXXX 722
           PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE       
Sbjct: 358 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE------- 410

Query: 723 XXXXXXXXXXXXXXXXXXXXXAESNMNDLVSEY 821
                                AESNMNDLVSEY
Sbjct: 411 ---------------------AESNMNDLVSEY 422


>ref|NP_001105426.1| tubulin beta-2 chain [Zea mays] gi|135460|sp|P18026.1|TBB2_MAIZE
           RecName: Full=Tubulin beta-2 chain; AltName:
           Full=Beta-2-tubulin gi|22184|emb|CAA37061.1| unnamed
           protein product [Zea mays] gi|413949279|gb|AFW81928.1|
           beta tubulin2 [Zea mays]
          Length = 444

 Score =  369 bits (946), Expect = e-99
 Identities = 196/273 (71%), Positives = 198/273 (72%)
 Frame = +3

Query: 3   YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSXXXXXXXXXXXXXXXXXXX 182
           YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS                   
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLH--- 264

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSK 362
                                      FFMVGFAPLTSRGSQ YRSLTVPELTQQMWDSK
Sbjct: 265 ---------------------------FFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSK 297

Query: 363 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 542
           NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 543 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNXXX 722
           PRGLSM+STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE       
Sbjct: 358 PRGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE------- 410

Query: 723 XXXXXXXXXXXXXXXXXXXXXAESNMNDLVSEY 821
                                AESNMNDLVSEY
Sbjct: 411 ---------------------AESNMNDLVSEY 422


>ref|XP_003567397.1| PREDICTED: tubulin beta-4 chain-like [Brachypodium distachyon]
          Length = 446

 Score =  368 bits (945), Expect = 1e-99
 Identities = 195/273 (71%), Positives = 199/273 (72%)
 Frame = +3

Query: 3   YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSXXXXXXXXXXXXXXXXXXX 182
           YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS                   
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLH--- 264

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSK 362
                                      FFMVGFAPLTSRGSQ+YR+LTVPELTQQMWDSK
Sbjct: 265 ---------------------------FFMVGFAPLTSRGSQMYRALTVPELTQQMWDSK 297

Query: 363 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 542
           NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIP 357

Query: 543 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNXXX 722
           PRGLSMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE       
Sbjct: 358 PRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE------- 410

Query: 723 XXXXXXXXXXXXXXXXXXXXXAESNMNDLVSEY 821
                                AESNMNDLVSEY
Sbjct: 411 ---------------------AESNMNDLVSEY 422