BLASTX nr result

ID: Cimicifuga21_contig00006652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006652
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314881.1| predicted membrane protein [Populus trichoca...   311   2e-82
ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricin...   310   4e-82
ref|XP_002281939.1| PREDICTED: GDT1-like protein 4 [Vitis vinife...   304   3e-80
ref|XP_002329381.1| predicted membrane protein [Populus trichoca...   303   4e-80
ref|XP_002312384.1| predicted membrane protein [Populus trichoca...   301   2e-79

>ref|XP_002314881.1| predicted membrane protein [Populus trichocarpa]
           gi|222863921|gb|EEF01052.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 228

 Score =  311 bits (796), Expect = 2e-82
 Identities = 164/225 (72%), Positives = 177/225 (78%)
 Frame = +1

Query: 220 SVLQGFSKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLCGCLGALIVMTILSALLGWAA 399
           SV QGF+KSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL GCL ALIVMTILSA++GWAA
Sbjct: 3   SVAQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAIVGWAA 62

Query: 400 PNLISRKWTHHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAKTGTEGKGS 579
           PNLISR WTHH+                                    +KA TGT   GS
Sbjct: 63  PNLISRTWTHHITTILFFGFGFWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTTKGGS 122

Query: 580 KVDDDLKKQRRPMLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIL 759
           K DD+LKK+RRP L+Q FSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGI+
Sbjct: 123 KDDDELKKRRRPFLSQLFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIV 182

Query: 760 GQALCTTAAVLGGKSLASQISERMVALSGGVLFLIFGMQSFLSTV 894
           GQALCTTAAV GGKSLASQISE++VALSGGVLF+IFG+QSFLSTV
Sbjct: 183 GQALCTTAAVFGGKSLASQISEKIVALSGGVLFIIFGIQSFLSTV 227


>ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223531427|gb|EEF33261.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 228

 Score =  310 bits (794), Expect = 4e-82
 Identities = 161/225 (71%), Positives = 178/225 (79%)
 Frame = +1

Query: 220 SVLQGFSKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLCGCLGALIVMTILSALLGWAA 399
           S++QGF+KSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL GCL ALIVMTILSA++GWAA
Sbjct: 3   SLVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAVVGWAA 62

Query: 400 PNLISRKWTHHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAKTGTEGKGS 579
           PNL+SR WTHH+                                    +KA  GT   G+
Sbjct: 63  PNLLSRTWTHHITTLLFFGFGIWSLWDGFTDKGEAEELAEVEAKLDADWKANKGTTKDGA 122

Query: 580 KVDDDLKKQRRPMLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIL 759
           K DD+LKKQRRP L+QFFSPILLKAFSITFFGEWGDKSQIATIGLAADENP GVVLGGI+
Sbjct: 123 KADDELKKQRRPFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGIV 182

Query: 760 GQALCTTAAVLGGKSLASQISERMVALSGGVLFLIFGMQSFLSTV 894
           GQALCTTAAV+GGKSLASQISE++VALSGGVLF+IFG+QSFLSTV
Sbjct: 183 GQALCTTAAVVGGKSLASQISEKIVALSGGVLFIIFGIQSFLSTV 227


>ref|XP_002281939.1| PREDICTED: GDT1-like protein 4 [Vitis vinifera]
           gi|297737851|emb|CBI27052.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  304 bits (778), Expect = 3e-80
 Identities = 158/228 (69%), Positives = 175/228 (76%)
 Frame = +1

Query: 211 MSYSVLQGFSKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLCGCLGALIVMTILSALLG 390
           MS SV+QGF+KSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL GCL ALIVMTI S ++G
Sbjct: 1   MSLSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTIFSVVVG 60

Query: 391 WAAPNLISRKWTHHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAKTGTEG 570
           WAAPNL+SRKWTHH+                                    +K  T +  
Sbjct: 61  WAAPNLLSRKWTHHITTLLFFGFGLWSLWDGFKEDGEAEELAEVEAKLNADWKTNTSSAK 120

Query: 571 KGSKVDDDLKKQRRPMLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLG 750
             SK DD+LKKQRRP+L QFFSPI LKAFSITFFGEWGDKSQ+ATIGLAADENP+GVVLG
Sbjct: 121 GDSKDDDELKKQRRPILMQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPIGVVLG 180

Query: 751 GILGQALCTTAAVLGGKSLASQISERMVALSGGVLFLIFGMQSFLSTV 894
           GI+GQALCTTAAVLGGKSLASQISE+ VALSGGVLF++FG+QS LSTV
Sbjct: 181 GIIGQALCTTAAVLGGKSLASQISEKFVALSGGVLFIVFGIQSLLSTV 228


>ref|XP_002329381.1| predicted membrane protein [Populus trichocarpa]
           gi|222870431|gb|EEF07562.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 228

 Score =  303 bits (777), Expect = 4e-80
 Identities = 159/225 (70%), Positives = 174/225 (77%)
 Frame = +1

Query: 220 SVLQGFSKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLCGCLGALIVMTILSALLGWAA 399
           SV QGF+KSLAMTV+SEIGDKTFFAAAILAMRHPRRLVL GCL ALIVMTILSA +GWAA
Sbjct: 3   SVAQGFTKSLAMTVVSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAA 62

Query: 400 PNLISRKWTHHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAKTGTEGKGS 579
           PNLISR WTHH+                                    +KA TGT   GS
Sbjct: 63  PNLISRAWTHHITTILFFGFGLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKVGS 122

Query: 580 KVDDDLKKQRRPMLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIL 759
           K  D+LKKQRR  L+QFFSPILLKAFSITFFGEWGDKSQIATIGLAADENP GVV+GGI+
Sbjct: 123 KDSDELKKQRRTFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIV 182

Query: 760 GQALCTTAAVLGGKSLASQISERMVALSGGVLFLIFGMQSFLSTV 894
           GQALCTTAAV+GGKSLASQISE++ ALSGGVLF++FG+QSFLSTV
Sbjct: 183 GQALCTTAAVIGGKSLASQISEKIAALSGGVLFIVFGIQSFLSTV 227


>ref|XP_002312384.1| predicted membrane protein [Populus trichocarpa]
           gi|222852204|gb|EEE89751.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 224

 Score =  301 bits (772), Expect = 2e-79
 Identities = 157/223 (70%), Positives = 173/223 (77%)
 Frame = +1

Query: 226 LQGFSKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLCGCLGALIVMTILSALLGWAAPN 405
           ++GF+KSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL GCL ALIVMTILSA +GWAAPN
Sbjct: 1   IKGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAAPN 60

Query: 406 LISRKWTHHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKAKTGTEGKGSKV 585
           LISR WTHH+                                    +KA TGT   GSK 
Sbjct: 61  LISRAWTHHITTILFFGFGLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKAGSKD 120

Query: 586 DDDLKKQRRPMLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGILGQ 765
            D+ KKQRR  L+QFFSPILLKAFSITFFGEWGDKSQIATIGLAADENP GVV+GGI+GQ
Sbjct: 121 SDEFKKQRRTFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIVGQ 180

Query: 766 ALCTTAAVLGGKSLASQISERMVALSGGVLFLIFGMQSFLSTV 894
           ALCTTAAV+GGKSLASQISE++VALSGGVLF++FG+QSFLSTV
Sbjct: 181 ALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSTV 223


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