BLASTX nr result

ID: Cimicifuga21_contig00006633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006633
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70181.1| hypothetical protein VITISV_000006 [Vitis vinifera]    72   7e-14
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]    67   8e-13
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    77   3e-12
emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]    65   3e-12
emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera]    64   1e-11

>emb|CAN70181.1| hypothetical protein VITISV_000006 [Vitis vinifera]
          Length = 751

 Score = 72.0 bits (175), Expect(2) = 7e-14
 Identities = 57/183 (31%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
 Frame = -3

Query: 653 FSSLVMGHRRIFLRNSRVPRQGNPLFPLIFVXXXXXXXXXXXXXXGAHFPSPACRCHSGV 474
           FS L+ G    F R+SR  RQG+PL P +F+                   S    C    
Sbjct: 291 FSILINGSPSGFFRSSRGLRQGDPLSPYLFLFAMEAL-------------SQLLSCARN- 336

Query: 473 FEI*SQMWWIRGILDYFKVV-LGLGVNPPKCKLLPVGEVGDFDALTTTFGCGVGALLATY 297
                      G +  F+V   GL VNP K + +PVGE    + L    GC +G+L  +Y
Sbjct: 337 ----------EGFISVFRVGGRGLKVNPSKTEAIPVGEGIPMETLALVLGCKIGSLPTSY 386

Query: 296 PSLPLGAPFRSKSI*DLVVEWVRKKLVGGRVSIFWGEAN*SLSRGTLSNLPVLSTSCPCF 117
             LPLGAP++S  + D V E  RK+L   +        + +L + TLS+LP    S    
Sbjct: 387 LGLPLGAPYKSTRVWDAVEERFRKRLSLWKRQYLSKGGHLTLLKSTLSSLPTYFLSLFVI 446

Query: 116 PSQ 108
           P +
Sbjct: 447 PKR 449



 Score = 30.8 bits (68), Expect(2) = 7e-14
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 112 PKKGCQEN*SDYLQLLWADSKEDRRYHLVHWKLVCSS 2
           PK+ C +        LW     D + HLV WK++C++
Sbjct: 447 PKRVCAKLEKIQRDFLWGGGALDNKPHLVSWKVICAA 483


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score = 67.4 bits (163), Expect(2) = 8e-13
 Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
 Frame = -3

Query: 653  FSSLVMGHRRIFLRNSRVPRQGNPLFPLIFVXXXXXXXXXXXXXXGAHFPSPACR----- 489
            FS L+ G    F  NS+  RQG+PL P +F+                 F S  CR     
Sbjct: 1298 FSILINGVPAGFFPNSKGLRQGDPLSPYLFILGMEVLSTLFRRAGEGGFLS-GCRLRGRG 1356

Query: 488  ------------------CHSGVFEI*SQMWWIRGILDYFKVVLGLGVNPPKCKLLPVGE 363
                              C +   ++ +  W    IL +F+   GL +N  K  L+PVG+
Sbjct: 1357 GVEMNVSHLLFADDTIIFCKAEREQVTNLSW----ILAWFEAASGLRINLAKSALIPVGQ 1412

Query: 362  VGDFDALTTTFGCGVGALLATYPSLPLGAPFRSKSI*DLVVEWVRKKLVGGRVSIFWGEA 183
            V + + L    GC +GAL   Y  LPLGA  ++ S  D V E +R++L   +        
Sbjct: 1413 VDELEELAAELGCKLGALPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKKQYISKGG 1472

Query: 182  N*SLSRGTLSNLPV 141
              +L + TL+++P+
Sbjct: 1473 RITLIKSTLASIPI 1486



 Score = 32.0 bits (71), Expect(2) = 8e-13
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -2

Query: 138  VYFMSLFSIPKRVAKRIEVIICNFY---GRIQRRIVGIIW 28
            +YF+SL  IPK V KRIE I  +F    G ++R+   I W
Sbjct: 1486 IYFLSLIRIPKSVTKRIEKIQKDFLWGGGSLERKAHLIKW 1525


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 55/182 (30%), Positives = 87/182 (47%)
 Frame = -3

Query: 659  SHFSSLVMGHRRIFLRNSRVPRQGNPLFPLIFVXXXXXXXXXXXXXXGAHFPSPACRCHS 480
            ++FS L+ G    F R++R  RQG+PL P +F+                          S
Sbjct: 1327 TNFSILINGTPSDFFRSTRGLRQGDPLSPYLFLL--------------------VMEADS 1366

Query: 479  GVFEI*SQMWWIRGILDYFKVVLGLGVNPPKCKLLPVGEVGDFDALTTTFGCGVGALLAT 300
            G      Q+ ++  +L +F+ + GL VN  K +++PVG V   + + +  GC +G L ++
Sbjct: 1367 G------QLRYLSWVLLWFEAISGLXVNRDKSEVIPVGRVDYLENIVSVLGCRIGNLPSS 1420

Query: 299  YPSLPLGAPFRSKSI*DLVVEWVRKKLVGGRVSIFWGEAN*SLSRGTLSNLPVLSTSCPC 120
            Y  LPLGAPF+S  + D+V E  RK L   +          +L + TLS+LP+   S   
Sbjct: 1421 YLGLPLGAPFKSPRVWDVVEERFRKCLSLWKRQYLSKGGRLTLIKSTLSSLPIYLMSLFV 1480

Query: 119  FP 114
             P
Sbjct: 1481 IP 1482



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 18/200 (9%)
 Frame = -3

Query: 653  FSSLVMGHRRIFLRNSRVPRQGNPLFPLIFVXXXXXXXXXXXXXXGAHFPSP---ACRCH 483
            FS L+ G    F R+SR  RQG+PL P +F+                +F S      R  
Sbjct: 3023 FSILINGSPSGFFRSSRGLRQGDPLSPYLFLLAMEALSQLLSRARNGNFISGFRVGGRGS 3082

Query: 482  SGVFEI*---------------SQMWWIRGILDYFKVVLGLGVNPPKCKLLPVGEVGDFD 348
             G+                    Q+ ++     +F+ + GL VN  K + +PVGE    +
Sbjct: 3083 EGLVVSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLKVNLNKTEAIPVGEDIPME 3142

Query: 347  ALTTTFGCGVGALLATYPSLPLGAPFRSKSI*DLVVEWVRKKLVGGRVSIFWGEAN*SLS 168
             L    GC +G+L  +Y  LPLGAP++S  + D V E  RK+L   +          +L 
Sbjct: 3143 TLAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRKRLSLWKRQYLSKGGRLTLL 3202

Query: 167  RGTLSNLPVLSTSCPCFPSQ 108
            + TLS+LP    S    P +
Sbjct: 3203 KSTLSSLPTYFLSLFVIPKR 3222


>emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]
          Length = 666

 Score = 65.5 bits (158), Expect(2) = 3e-12
 Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
 Frame = -3

Query: 653 FSSLVMGHRRIFLRNSRVPRQGNPLFPLIFVXXXXXXXXXXXXXXGAHFPSPACRCHS-- 480
           FS L+ G    F  NS+   QG+PL P +FV                 F S  CR     
Sbjct: 253 FSILINGVPAGFFSNSKGLXQGDPLSPYLFVLGMEXLSTLLRRAGEGGFLS-GCRLRGRG 311

Query: 479 GVFEI*SQMWW-----------------IRGILDYFKVVLGLGVNPPKCKLLPVGEVGDF 351
           GV  I S + +                 +  +L +F+   GL +N  K  L+PVG+V + 
Sbjct: 312 GVELIVSHLLFADDTIIFCKAKREQVTNLSWVLAWFEAASGLXINLAKSALIPVGQVDEL 371

Query: 350 DALTTTFGCGVGALLATYPSLPLGAPFRSKSI*DLVVEWVRKKLVGGRVSIFWGEAN*SL 171
           + L    GC +G L   Y  LPLGA  ++ S  D V E +R++L   +          +L
Sbjct: 372 EELAAELGCRLGVLPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRITL 431

Query: 170 SRGTLSNLPV 141
            + TL+++P+
Sbjct: 432 IKSTLASIPI 441



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -2

Query: 138 VYFMSLFSIPKRVAKRIEVIICNFY---GRIQRRIVGIIW 28
           +YF+SL  IPK V KRIE I  +F    G ++R+   I W
Sbjct: 441 IYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLERKAHLIKW 480


>emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera]
          Length = 1222

 Score = 63.5 bits (153), Expect(2) = 1e-11
 Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 19/190 (10%)
 Frame = -3

Query: 653  FSSLVMGHRRIFLRNSRVPRQGNPLFPLIFVXXXXXXXXXXXXXXGAHFPSPACRCHS-- 480
            FS L+ G    F  NS+   QG+PL P +FV                 F S  CR     
Sbjct: 759  FSILINGVPAGFFSNSKGLWQGDPLSPYLFVLGMEVLSTLLRRAGEGGFLS-GCRLRGRG 817

Query: 479  GVFEI*SQMWW-----------------IRGILDYFKVVLGLGVNPPKCKLLPVGEVGDF 351
            GV  I S + +                 +  +L +F+   GL +N  K  L+PVG+V + 
Sbjct: 818  GVELIVSHLLFADDTIIFCKAKREQVTNLSWVLAWFEAASGLRINLAKSALIPVGQVDEL 877

Query: 350  DALTTTFGCGVGALLATYPSLPLGAPFRSKSI*DLVVEWVRKKLVGGRVSIFWGEAN*SL 171
            + L    GC +G L   Y  LPLGA  ++ S  D V E +R++L   +          +L
Sbjct: 878  EELAAELGCRLGVLPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRITL 937

Query: 170  SRGTLSNLPV 141
             + TL+ +P+
Sbjct: 938  IKSTLAXIPI 947



 Score = 32.0 bits (71), Expect(2) = 1e-11
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -2

Query: 138  VYFMSLFSIPKRVAKRIEVIICNFY---GRIQRRIVGIIW 28
            +YF+SL  IPK V KRIE I  +F    G ++R+   I W
Sbjct: 947  IYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLERKAHLIKW 986


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