BLASTX nr result

ID: Cimicifuga21_contig00006613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006613
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW65297.1| putative TCP-1/cpn60 chaperonin family protein [Z...    79   2e-28
ref|XP_002451006.1| hypothetical protein SORBIDRAFT_05g022470 [S...    79   2e-28
gb|ADL36829.1| TCP domain class transcription factor [Malus x do...    83   2e-28
ref|XP_004141139.1| PREDICTED: T-complex protein 1 subunit theta...    82   3e-28
ref|XP_004158362.1| PREDICTED: T-complex protein 1 subunit theta...    82   3e-28

>gb|AFW65297.1| putative TCP-1/cpn60 chaperonin family protein [Zea mays]
          Length = 548

 Score = 79.0 bits (193), Expect(2) = 2e-28
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   MEIISSLYAAHAAGNTKMGIDLEEGVCKDVSPLNVWDLHVTKFFA 135
           MEIISSLYA HA+GN K+GIDLEEG CKD+S L +WDL+VTKFFA
Sbjct: 465 MEIISSLYAEHASGNAKVGIDLEEGACKDISTLKIWDLYVTKFFA 509



 Score = 73.6 bits (179), Expect(2) = 2e-28
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +3

Query: 204 FFALKYAADAACTVLRVDQIIMAKQAGGPRRDQQPAGAGNDED 332
           FFALKY+ADAACTVLRVDQIIMAK AGGPRRD QP G G DED
Sbjct: 507 FFALKYSADAACTVLRVDQIIMAKPAGGPRRDAQP-GGGMDED 548


>ref|XP_002451006.1| hypothetical protein SORBIDRAFT_05g022470 [Sorghum bicolor]
           gi|241936849|gb|EES09994.1| hypothetical protein
           SORBIDRAFT_05g022470 [Sorghum bicolor]
          Length = 548

 Score = 79.0 bits (193), Expect(2) = 2e-28
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   MEIISSLYAAHAAGNTKMGIDLEEGVCKDVSPLNVWDLHVTKFFA 135
           MEIISSLYA HA+GN K+GIDLEEG CKD+S L +WDL+VTKFFA
Sbjct: 465 MEIISSLYAEHASGNVKVGIDLEEGACKDISTLKIWDLYVTKFFA 509



 Score = 73.6 bits (179), Expect(2) = 2e-28
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +3

Query: 204 FFALKYAADAACTVLRVDQIIMAKQAGGPRRDQQPAGAGNDED 332
           FFALKY+ADAACTVLRVDQIIMAK AGGPRRD QP G G DED
Sbjct: 507 FFALKYSADAACTVLRVDQIIMAKPAGGPRRDAQP-GGGMDED 548


>gb|ADL36829.1| TCP domain class transcription factor [Malus x domestica]
          Length = 541

 Score = 83.2 bits (204), Expect(2) = 2e-28
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   MEIISSLYAAHAAGNTKMGIDLEEGVCKDVSPLNVWDLHVTKFFA 135
           MEIISSLYA HA+GNTK GIDLEEG CKDVS +NVWDLH+TKFFA
Sbjct: 459 MEIISSLYAEHASGNTKAGIDLEEGRCKDVSTINVWDLHITKFFA 503



 Score = 69.3 bits (168), Expect(2) = 2e-28
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +3

Query: 204 FFALKYAADAACTVLRVDQIIMAKQAGGPRRDQQPAGAGND 326
           FFALKYAADAACTVLRVDQIIMAK AGGP R  QPAG   D
Sbjct: 501 FFALKYAADAACTVLRVDQIIMAKPAGGPSRRDQPAGMDED 541


>ref|XP_004141139.1| PREDICTED: T-complex protein 1 subunit theta-like [Cucumis sativus]
          Length = 545

 Score = 82.4 bits (202), Expect(2) = 3e-28
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   MEIISSLYAAHAAGNTKMGIDLEEGVCKDVSPLNVWDLHVTKFFA 135
           MEIISSLYA HA+GNT++GIDLEEG+CKDVS +N+WDL++TKFFA
Sbjct: 463 MEIISSLYAEHASGNTRVGIDLEEGICKDVSTMNIWDLYITKFFA 507



 Score = 69.3 bits (168), Expect(2) = 3e-28
 Identities = 33/41 (80%), Positives = 34/41 (82%)
 Frame = +3

Query: 204 FFALKYAADAACTVLRVDQIIMAKQAGGPRRDQQPAGAGND 326
           FFALKYAADA CTVLRVDQIIM+K AGGPRR  QPAG   D
Sbjct: 505 FFALKYAADAVCTVLRVDQIIMSKPAGGPRRGDQPAGMDED 545


>ref|XP_004158362.1| PREDICTED: T-complex protein 1 subunit theta-like [Cucumis sativus]
          Length = 340

 Score = 82.4 bits (202), Expect(2) = 3e-28
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   MEIISSLYAAHAAGNTKMGIDLEEGVCKDVSPLNVWDLHVTKFFA 135
           MEIISSLYA HA+GNT++GIDLEEG+CKDVS +N+WDL++TKFFA
Sbjct: 258 MEIISSLYAEHASGNTRVGIDLEEGICKDVSTMNIWDLYITKFFA 302



 Score = 69.3 bits (168), Expect(2) = 3e-28
 Identities = 33/41 (80%), Positives = 34/41 (82%)
 Frame = +3

Query: 204 FFALKYAADAACTVLRVDQIIMAKQAGGPRRDQQPAGAGND 326
           FFALKYAADA CTVLRVDQIIM+K AGGPRR  QPAG   D
Sbjct: 300 FFALKYAADAVCTVLRVDQIIMSKPAGGPRRGDQPAGMDED 340


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