BLASTX nr result
ID: Cimicifuga21_contig00006611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006611
(2057 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing pr... 725 0.0
ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing pr... 717 0.0
ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|2... 702 0.0
ref|XP_003540456.1| PREDICTED: leucine-rich repeat-containing pr... 696 0.0
ref|XP_003543250.1| PREDICTED: leucine-rich repeat-containing pr... 697 0.0
>ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
[Vitis vinifera] gi|302143032|emb|CBI20327.3| unnamed
protein product [Vitis vinifera]
Length = 584
Score = 725 bits (1871), Expect(2) = 0.0
Identities = 374/547 (68%), Positives = 440/547 (80%)
Frame = +1
Query: 139 MDRVLKAAXXXXXXXXXXXXXXEVPNEVYRILDTAGEGDKWWEAVELQKLILAHNEIEVL 318
M+R LKAA EVP+EVYR LD GEG+KWWEAVELQKLILAHN+IE L
Sbjct: 1 MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESL 60
Query: 319 KEEIXXXXXXXXXXISHNKLSCLPASIGELHFLKSLDVSFNSIISLPEEIGSVTSLVKID 498
+E++ +S+NKL LPA+IGEL LKSLD+S NSI+ +PE IGS TSLVK+D
Sbjct: 61 REDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLD 120
Query: 499 CSNNLLKELPRSLGGCLDLSDLKASNNCITKLPGDLVNCSKLMKLDVEGNKLTILCENNV 678
CSNN LK+LP SLG C +L +LKASNNCIT LP DL +C KL+KLDVEGNKLT+L EN +
Sbjct: 121 CSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMI 180
Query: 679 LSWTMLTELNASKNLLNSIPENIGTLSRVVRLDFHQNKISSIPSSIMGCGSLAEFYMGNN 858
SW +LTELNAS+NLL +PENIG LSR++RLDFHQN+ISSIP+SI GC SLAEFYMGNN
Sbjct: 181 ASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN 240
Query: 859 MLSSLPSEIGALSRLGTLDLHSNQLKNFPAEACKLHLSVLDLSNNTLSGLPPEIGTMTTL 1038
+LSSL +EIGALS LGTLDLHSNQLK +P EACKL L VLDLSNN+LSGLPPEIG MTTL
Sbjct: 241 VLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMTTL 300
Query: 1039 RKLLLAGNPLRTLRSSLVSGPTPXXXXXXXXXXXXDEESGSSSTPAKDHISMAARLSIST 1218
RKL+L GNPLRTLRSSLVSGPTP DE+S +++T ++ ++MAAR+SI++
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSEAATTAKENVVTMAARISITS 360
Query: 1219 KELSLSGLGLSTVPPQVWESGDTIKVDLSRNSIQELPNELMSCSSLQALILSGNKITEWP 1398
KELSL G+GLS VP QVWES + +KVDLSRNSIQELP EL SC SLQALILS NKI EWP
Sbjct: 361 KELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQALILSRNKIQEWP 420
Query: 1399 GSVLRSLPNLTCLKLDNNPLKQIHPDGFGSLSKLQILDLSGNTASLPEPPALSHLSHLEE 1578
G +L+SLPNL+CLKLDNNPL+QI DGF ++SKLQILDLSGN+ASLP+ PA S L L+E
Sbjct: 421 GVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNSASLPDNPAFSSLPQLQE 480
Query: 1579 LYMRRMQLHEVRSDLLSLQKLRILDLSQNCITSIPLELKNLTSLTELDLSNNNITSLPPQ 1758
LY+RRMQL EV SD+LSLQ+L+ILDLSQN + IP KNLTSLTEL+LS+N+I +LPP+
Sbjct: 481 LYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTSLTELNLSDNSIATLPPE 540
Query: 1759 LGLLEPS 1779
LGLLEPS
Sbjct: 541 LGLLEPS 547
Score = 39.3 bits (90), Expect(2) = 0.0
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 1868 RAILDRGTKAVLTYLKEKIPE 1930
R ILDRGTKAVL YLK+KIPE
Sbjct: 563 RTILDRGTKAVLKYLKDKIPE 583
>ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
[Vitis vinifera]
Length = 588
Score = 717 bits (1851), Expect(2) = 0.0
Identities = 376/551 (68%), Positives = 440/551 (79%), Gaps = 4/551 (0%)
Frame = +1
Query: 139 MDRVLKAAXXXXXXXXXXXXXXEVPNEVYRILDTAGEGDKWWEAVELQKLILAHNEIEVL 318
M+R LKAA EVP+EVYR LD GEG+KWWEAVELQKLILAHN+IE L
Sbjct: 1 MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESL 60
Query: 319 KEEIXXXXXXXXXXISHNKLSCLPASIGELHFLKSLDVSFNSIISLPEEIGSVTSLVKID 498
+E++ +S+NKL LPA+IGEL LKSLD+S NSI+ +PE IGS TSLVK+D
Sbjct: 61 REDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLD 120
Query: 499 CSNNLLKELPRSLGGCLDLSDLKASNNCITKLPGDLVNCSKLMKLDVEGNKLTILCENNV 678
CSNN LK+LP SLG C +L +LKASNNCIT LP DL +C KL+KLDVEGNKLT+L EN +
Sbjct: 121 CSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMI 180
Query: 679 LSWTMLTELNASKNLLNSIPENIGTLSRVVRLDFHQNKISSIPSSIMGCGSLAEFYMGNN 858
SW +LTELNAS+NLL +PENIG LSR++RLDFHQN+ISSIP+SI GC SLAEFYMGNN
Sbjct: 181 ASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN 240
Query: 859 MLSSLPSEIGALSRLGTLDLHSNQLKNFPAEACKLHLSVLDLSNNTLSGLPPEIGTMTTL 1038
+LSSL +EIGALS LGTLDLHSNQLK +P EACKL L VLDLSNN+LSGLPPEIG MTTL
Sbjct: 241 VLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMTTL 300
Query: 1039 RKLLLAGNPLRTLRSSLVSGPTPXXXXXXXXXXXXDEE---SGSSSTPAKDH-ISMAARL 1206
RKL+L GNPLRTLRSSLVSGPTP DE +S+T AK++ ++MAAR+
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEGVFLFFTSATTAKENVVTMAARI 360
Query: 1207 SISTKELSLSGLGLSTVPPQVWESGDTIKVDLSRNSIQELPNELMSCSSLQALILSGNKI 1386
SI++KELSL G+GLS VP QVWES + +KVDLSRNSIQELP EL SC SLQALILS NKI
Sbjct: 361 SITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQALILSRNKI 420
Query: 1387 TEWPGSVLRSLPNLTCLKLDNNPLKQIHPDGFGSLSKLQILDLSGNTASLPEPPALSHLS 1566
EWPG +L+SLPNL+CLKLDNNPL+QI DGF ++SKLQILDLSGN+ASLP+ PA S L
Sbjct: 421 QEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNSASLPDNPAFSSLP 480
Query: 1567 HLEELYMRRMQLHEVRSDLLSLQKLRILDLSQNCITSIPLELKNLTSLTELDLSNNNITS 1746
L+ELY+RRMQL EV SD+LSLQ+L+ILDLSQN + IP KNLTSLTEL+LS+N+I +
Sbjct: 481 QLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTSLTELNLSDNSIAT 540
Query: 1747 LPPQLGLLEPS 1779
LPP+LGLLEPS
Sbjct: 541 LPPELGLLEPS 551
Score = 39.3 bits (90), Expect(2) = 0.0
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 1868 RAILDRGTKAVLTYLKEKIPE 1930
R ILDRGTKAVL YLK+KIPE
Sbjct: 567 RTILDRGTKAVLKYLKDKIPE 587
>ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|222859974|gb|EEE97521.1|
predicted protein [Populus trichocarpa]
Length = 580
Score = 702 bits (1812), Expect(2) = 0.0
Identities = 369/547 (67%), Positives = 427/547 (78%)
Frame = +1
Query: 139 MDRVLKAAXXXXXXXXXXXXXXEVPNEVYRILDTAGEGDKWWEAVELQKLILAHNEIEVL 318
MDRVLKAA EVP+EVY+ILD GEG+KWWE VELQKLILAHN IE +
Sbjct: 1 MDRVLKAARSSGSLNLSNRSLSEVPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAI 60
Query: 319 KEEIXXXXXXXXXXISHNKLSCLPASIGELHFLKSLDVSFNSIISLPEEIGSVTSLVKID 498
KE++ +SHNKLS LPA+IGEL LK LDVSFN I +P+EIGS TSLVK D
Sbjct: 61 KEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNLIQKVPDEIGSATSLVKFD 120
Query: 499 CSNNLLKELPRSLGGCLDLSDLKASNNCITKLPGDLVNCSKLMKLDVEGNKLTILCENNV 678
CS+N L+ELP SLGGCL LSDLKASNN IT LP DL CSKL K+DVEGNKL +L N +
Sbjct: 121 CSSNQLRELPSSLGGCLALSDLKASNNSITSLPEDLARCSKLTKVDVEGNKLKVLSGNLM 180
Query: 679 LSWTMLTELNASKNLLNSIPENIGTLSRVVRLDFHQNKISSIPSSIMGCGSLAEFYMGNN 858
SWTMLTE NASKNLL+ IP+N G+LSR++RLD HQN+IS+IP SIMGC SLAEFYMGNN
Sbjct: 181 ASWTMLTEFNASKNLLSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNN 240
Query: 859 MLSSLPSEIGALSRLGTLDLHSNQLKNFPAEACKLHLSVLDLSNNTLSGLPPEIGTMTTL 1038
LS+LP+EIGALSRLGTLDLHSNQLK PAEACKL LS+LDLSNN+L+GLPPE+G MTTL
Sbjct: 241 ALSTLPAEIGALSRLGTLDLHSNQLKEIPAEACKLQLSMLDLSNNSLTGLPPELGKMTTL 300
Query: 1039 RKLLLAGNPLRTLRSSLVSGPTPXXXXXXXXXXXXDEESGSSSTPAKDHISMAARLSIST 1218
RKLLL GNPLRTLRSSLVSGPT E+S +++ KD ISM ARLS+S+
Sbjct: 301 RKLLLNGNPLRTLRSSLVSGPTATLLNYLRSRLSEGEDSKATTPAKKDLISMTARLSVSS 360
Query: 1219 KELSLSGLGLSTVPPQVWESGDTIKVDLSRNSIQELPNELMSCSSLQALILSGNKITEWP 1398
KELSL GLGLS VP +VWES + +KVDLSRNSIQELP EL C LILS NKI++WP
Sbjct: 361 KELSLQGLGLSAVPSEVWESNEIVKVDLSRNSIQELPLELSLC----CLILSRNKISDWP 416
Query: 1399 GSVLRSLPNLTCLKLDNNPLKQIHPDGFGSLSKLQILDLSGNTASLPEPPALSHLSHLEE 1578
++L+SLPNL CLKLDNN L QI DGF ++ LQILDLSGN ASL PA S L HL+E
Sbjct: 417 CAILKSLPNLICLKLDNNALTQIPSDGFQAVPMLQILDLSGNPASLLGHPAFSSLPHLKE 476
Query: 1579 LYMRRMQLHEVRSDLLSLQKLRILDLSQNCITSIPLELKNLTSLTELDLSNNNITSLPPQ 1758
LY+R++QL E+ SD+LSLQ+L+IL+LSQN + SIP LKNLTSLTELDLS+NNI++LPP+
Sbjct: 477 LYLRQVQLREIPSDILSLQQLQILNLSQNSLHSIPEGLKNLTSLTELDLSDNNISALPPE 536
Query: 1759 LGLLEPS 1779
LGLLEPS
Sbjct: 537 LGLLEPS 543
Score = 37.0 bits (84), Expect(2) = 0.0
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 1868 RAILDRGTKAVLTYLKEKIPE 1930
R ILDRGTKAVL YL +KIPE
Sbjct: 559 RTILDRGTKAVLKYLMDKIPE 579
>ref|XP_003540456.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
max]
Length = 586
Score = 696 bits (1797), Expect(2) = 0.0
Identities = 368/548 (67%), Positives = 431/548 (78%), Gaps = 1/548 (0%)
Frame = +1
Query: 139 MDRVLKAAXXXXXXXXXXXXXXEVPNEVYRILDTAGEGD-KWWEAVELQKLILAHNEIEV 315
MDR+LKAA E+P+EVYR L+ G GD KWWEAVELQKLILAHN I
Sbjct: 1 MDRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGDDKWWEAVELQKLILAHNSIAS 60
Query: 316 LKEEIXXXXXXXXXXISHNKLSCLPASIGELHFLKSLDVSFNSIISLPEEIGSVTSLVKI 495
LKE++ +SHN LS LPA+IGEL LK LDVSFNSI+++PEEIGS SLVK+
Sbjct: 61 LKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVNIPEEIGSAMSLVKL 120
Query: 496 DCSNNLLKELPRSLGGCLDLSDLKASNNCITKLPGDLVNCSKLMKLDVEGNKLTILCENN 675
DCSNN L ELP SLG CL+LSDLK SNN IT LP DL NCSKL KLD+EGNKLT++ EN
Sbjct: 121 DCSNNQLTELPSSLGRCLELSDLKGSNNLITSLPEDLANCSKLSKLDMEGNKLTVISENL 180
Query: 676 VLSWTMLTELNASKNLLNSIPENIGTLSRVVRLDFHQNKISSIPSSIMGCGSLAEFYMGN 855
+ SWTMLTE NASKNLLN IP +IG LSR++R+ HQN+IS+IPSSI+GC SL E Y+GN
Sbjct: 181 ISSWTMLTEFNASKNLLNGIPTSIGGLSRLIRVYVHQNRISAIPSSIIGCHSLTELYLGN 240
Query: 856 NMLSSLPSEIGALSRLGTLDLHSNQLKNFPAEACKLHLSVLDLSNNTLSGLPPEIGTMTT 1035
N +S+LP EIGALSRLGTLDLHSNQLK++P EACKL L VLDLSNN+LSGLPPE+G MTT
Sbjct: 241 NNISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTT 300
Query: 1036 LRKLLLAGNPLRTLRSSLVSGPTPXXXXXXXXXXXXDEESGSSSTPAKDHISMAARLSIS 1215
LRKLLL+GNP+RTLRSSLVSGPTP DE+S + T K+ I+MA RLSI+
Sbjct: 301 LRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDS-EAVTTTKEVIAMATRLSIT 359
Query: 1216 TKELSLSGLGLSTVPPQVWESGDTIKVDLSRNSIQELPNELMSCSSLQALILSGNKITEW 1395
+KELS+ GLGLS VP +VWESG+ IK++LSRNSIQELP EL SC SLQ LILS N+I EW
Sbjct: 360 SKELSMEGLGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKEW 419
Query: 1396 PGSVLRSLPNLTCLKLDNNPLKQIHPDGFGSLSKLQILDLSGNTASLPEPPALSHLSHLE 1575
PGS+L+SL +L+CLKLDNNPLKQI DGF + KLQILDLSGN ASL + PA S L +L+
Sbjct: 420 PGSILKSLSSLSCLKLDNNPLKQIPLDGFEVVPKLQILDLSGNAASLLDVPAFSSLPYLQ 479
Query: 1576 ELYMRRMQLHEVRSDLLSLQKLRILDLSQNCITSIPLELKNLTSLTELDLSNNNITSLPP 1755
ELY+RRM+L EV SD++ LQ+LRILDLSQN + SIP+ LK+LTSL ELDLSNNNI+ L P
Sbjct: 480 ELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLTSLKELDLSNNNISVLLP 539
Query: 1756 QLGLLEPS 1779
+LGLLEPS
Sbjct: 540 ELGLLEPS 547
Score = 38.1 bits (87), Expect(2) = 0.0
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 1868 RAILDRGTKAVLTYLKEKIPE 1930
R +LDRGTKAVL YLK+K+PE
Sbjct: 563 RTVLDRGTKAVLQYLKDKLPE 583
>ref|XP_003543250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
max]
Length = 583
Score = 697 bits (1800), Expect(2) = 0.0
Identities = 364/547 (66%), Positives = 426/547 (77%)
Frame = +1
Query: 139 MDRVLKAAXXXXXXXXXXXXXXEVPNEVYRILDTAGEGDKWWEAVELQKLILAHNEIEVL 318
MDR+LKAA E+P+EVYR L+ G DKWWEA ELQKLILAHN I L
Sbjct: 1 MDRILKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIASL 60
Query: 319 KEEIXXXXXXXXXXISHNKLSCLPASIGELHFLKSLDVSFNSIISLPEEIGSVTSLVKID 498
KE++ +SHN LS LPA+IGEL LK LDVSFNSI+ +PEEIGS SLVK+D
Sbjct: 61 KEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKIPEEIGSAVSLVKLD 120
Query: 499 CSNNLLKELPRSLGGCLDLSDLKASNNCITKLPGDLVNCSKLMKLDVEGNKLTILCENNV 678
CSNN L ELP SLG CL+LSDLK SNN IT LP DL NCSKL KLD+EGN+LT++ EN +
Sbjct: 121 CSNNRLTELPSSLGRCLELSDLKGSNNLITNLPEDLANCSKLSKLDMEGNRLTVMSENLI 180
Query: 679 LSWTMLTELNASKNLLNSIPENIGTLSRVVRLDFHQNKISSIPSSIMGCGSLAEFYMGNN 858
SWTMLTE N+SKNLLN IP +IG LSR++RLD HQN+IS+IPSSI+GC SL E Y+GNN
Sbjct: 181 SSWTMLTEFNSSKNLLNGIPTSIGGLSRLIRLDLHQNRISAIPSSIIGCHSLTELYLGNN 240
Query: 859 MLSSLPSEIGALSRLGTLDLHSNQLKNFPAEACKLHLSVLDLSNNTLSGLPPEIGTMTTL 1038
+S+LP EIGALSRLGTLDLHSNQLK++P EACKL L VLDLSNN+LSGLPPE+G MTTL
Sbjct: 241 NISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTL 300
Query: 1039 RKLLLAGNPLRTLRSSLVSGPTPXXXXXXXXXXXXDEESGSSSTPAKDHISMAARLSIST 1218
RKLLL+GNP+RTLRSSLVSGPTP DE+S + T K+ I+MA RLSIS+
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDS-EAVTTTKEVITMATRLSISS 359
Query: 1219 KELSLSGLGLSTVPPQVWESGDTIKVDLSRNSIQELPNELMSCSSLQALILSGNKITEWP 1398
KELS+ LGLS VP +VWESG+ IK++LSRNSIQELP EL SC SLQ LILS N+I +WP
Sbjct: 360 KELSMEELGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKDWP 419
Query: 1399 GSVLRSLPNLTCLKLDNNPLKQIHPDGFGSLSKLQILDLSGNTASLPEPPALSHLSHLEE 1578
GS+L+SL +L+CLKLDNNPL+QI DGF + KLQILDLSGN ASL + PA S L +L+E
Sbjct: 420 GSILKSLSSLSCLKLDNNPLRQIPSDGFEMVPKLQILDLSGNAASLLDGPAFSSLPYLQE 479
Query: 1579 LYMRRMQLHEVRSDLLSLQKLRILDLSQNCITSIPLELKNLTSLTELDLSNNNITSLPPQ 1758
LY+RRM+L EV SD++ L +LRILDLSQN + SIP+ LK LTSL ELDLSNNNI LPP+
Sbjct: 480 LYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALTSLQELDLSNNNIAVLPPE 539
Query: 1759 LGLLEPS 1779
LGLLEPS
Sbjct: 540 LGLLEPS 546
Score = 37.0 bits (84), Expect(2) = 0.0
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2
Query: 1868 RAILDRGTKAVLTYLKEKIPE 1930
R +LD+GTKAVL YLK+K+PE
Sbjct: 562 RTVLDKGTKAVLQYLKDKLPE 582